RNA–Protein interactions for RNA: ENST00000621783.4

CPNE3-212, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 817 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-212ENST00000621783 GLT1D1Q96MS3 346 aa11.64□□□□□ -0.55
CPNE3-212ENST00000621783 DEFB118Q96PH6 123 aa11.64□□□□□ -0.55
CPNE3-212ENST00000621783 ACO2Q99798 780 aaKnown RBP11.64□□□□□ -0.55
CPNE3-212ENST00000621783 HAPLN2Q9GZV7 340 aa11.64□□□□□ -0.55
CPNE3-212ENST00000621783 ADAMTS10Q9H324 1103 aa11.64□□□□□ -0.55
CPNE3-212ENST00000621783 PRMT7Q9NVM4 692 aaPredicted RBP11.64□□□□□ -0.55
CPNE3-212ENST00000621783 ANKFY1Q9P2R3 1169 aa11.64□□□□□ -0.55
CPNE3-212ENST00000621783 PHF24Q9UPV7 400 aa11.64□□□□□ -0.55
CPNE3-212ENST00000621783 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.64□□□□□ -0.55
CPNE3-212ENST00000621783 STYXL1Q9Y6J8 313 aa11.64□□□□□ -0.55
CPNE3-212ENST00000621783 ITIH6Q6UXX5 1313 aa11.63□□□□□ -0.55
CPNE3-212ENST00000621783 GOLGA8IPA6NC78 632 aa11.63□□□□□ -0.55
CPNE3-212ENST00000621783 GOLGA8JA6NMD2 632 aa11.63□□□□□ -0.55
CPNE3-212ENST00000621783 KBTBD13C9JR72 458 aa11.63□□□□□ -0.55
CPNE3-212ENST00000621783 DNM1LO00429 736 aa11.63□□□□□ -0.55
CPNE3-212ENST00000621783 ACKR2O00590 384 aa11.63□□□□□ -0.55
CPNE3-212ENST00000621783 ABLIM1O14639 778 aa11.63□□□□□ -0.55
CPNE3-212ENST00000621783 KIAA0391O15091 583 aaKnown RBP11.63□□□□□ -0.55
CPNE3-212ENST00000621783 MAPK13O15264 365 aa11.63□□□□□ -0.55
CPNE3-212ENST00000621783 PTMAP06454 111 aaKnown RBP11.63□□□□□ -0.55
CPNE3-212ENST00000621783 CTCFP49711 727 aaPredicted RBP11.63□□□□□ -0.55
CPNE3-212ENST00000621783 LBX1P52954 281 aa11.63□□□□□ -0.55
CPNE3-212ENST00000621783 PTPN11Q06124 597 aaPredicted RBP11.63□□□□□ -0.55
CPNE3-212ENST00000621783 PPP2R3AQ06190 1150 aa11.63□□□□□ -0.55
CPNE3-212ENST00000621783 BFSP1Q12934 665 aa11.63□□□□□ -0.55
CPNE3-212ENST00000621783 PRPF4BQ13523 1007 aaKnown RBP11.63□□□□□ -0.55
CPNE3-212ENST00000621783 FKBP15Q5T1M5 1219 aa11.63□□□□□ -0.55
CPNE3-212ENST00000621783 SLFN12LQ6IEE8 588 aa11.63□□□□□ -0.55
CPNE3-212ENST00000621783 FBXO46Q6PJ61 603 aaPredicted RBP11.63□□□□□ -0.55
CPNE3-212ENST00000621783 SRGAP1Q7Z6B7 1085 aa11.63□□□□□ -0.55
CPNE3-212ENST00000621783 SERINC5Q86VE9 423 aa11.63□□□□□ -0.55
CPNE3-212ENST00000621783 CBWD2Q8IUF1 395 aa11.63□□□□□ -0.55
CPNE3-212ENST00000621783 GPD1LQ8N335 351 aa11.63□□□□□ -0.55
CPNE3-212ENST00000621783 WNT8BQ93098 351 aa11.63□□□□□ -0.55
CPNE3-212ENST00000621783 VTI1AQ96AJ9 217 aa11.63□□□□□ -0.55
CPNE3-212ENST00000621783 ZBTB45Q96K62 511 aaPredicted RBP11.63□□□□□ -0.55
CPNE3-212ENST00000621783 PRIMPOLQ96LW4 560 aa11.63□□□□□ -0.55
CPNE3-212ENST00000621783 FBXL18Q96ME1 805 aa11.63□□□□□ -0.55
CPNE3-212ENST00000621783 OSMRQ99650 979 aa11.63□□□□□ -0.55
CPNE3-212ENST00000621783 MSTO1Q9BUK6 570 aa11.63□□□□□ -0.55
CPNE3-212ENST00000621783 GCOM2Q9BZD3 368 aaPredicted RBP11.63□□□□□ -0.55
CPNE3-212ENST00000621783 NDST4Q9H3R1 872 aa11.63□□□□□ -0.55
CPNE3-212ENST00000621783 CDHR5Q9HBB8 845 aa11.63□□□□□ -0.55
CPNE3-212ENST00000621783 GINS2Q9Y248 185 aa11.63□□□□□ -0.55
CPNE3-212ENST00000621783 TRIP12Q14669 1992 aaPredicted RBP11.63□□□□□ -0.55
CPNE3-212ENST00000621783 A0A0B4J269 797 aa11.62□□□□□ -0.55
CPNE3-212ENST00000621783 A0A0U1RQG5 324 aaPredicted RBP11.62□□□□□ -0.55
CPNE3-212ENST00000621783 A0A1W2PQC6 194 aa11.62□□□□□ -0.55
CPNE3-212ENST00000621783 GOLGA6L6A8MZA4 724 aa11.62□□□□□ -0.55
CPNE3-212ENST00000621783 EXTL3O43909 919 aa11.62□□□□□ -0.55
CPNE3-212ENST00000621783 TSPAN1O60635 241 aa11.62□□□□□ -0.55
CPNE3-212ENST00000621783 CSDE1O75534 798 aaKnown RBP11.62□□□□□ -0.55
CPNE3-212ENST00000621783 TOM1L1O75674 476 aa11.62□□□□□ -0.55
CPNE3-212ENST00000621783 ERLIN2O94905 339 aa11.62□□□□□ -0.55
CPNE3-212ENST00000621783 AFPP02771 609 aaKnown RBP11.62□□□□□ -0.55
CPNE3-212ENST00000621783 TRIM49P0CI25 452 aa11.62□□□□□ -0.55
CPNE3-212ENST00000621783 TRIM49CP0CI26 452 aa11.62□□□□□ -0.55
CPNE3-212ENST00000621783 HARSP12081 509 aaKnown RBP11.62□□□□□ -0.55
CPNE3-212ENST00000621783 KRT13P13646 458 aa11.62□□□□□ -0.55
CPNE3-212ENST00000621783 DARSP14868 501 aaKnown RBP11.62□□□□□ -0.55
CPNE3-212ENST00000621783 PROZP22891 400 aa11.62□□□□□ -0.55
CPNE3-212ENST00000621783 MATR3P43243 847 aaKnown RBP eCLIP11.62□□□□□ -0.55
CPNE3-212ENST00000621783 MRPS6P82932 125 aaKnown RBP11.62□□□□□ -0.55
CPNE3-212ENST00000621783 CDC42EP1Q00587 391 aa11.62□□□□□ -0.55
CPNE3-212ENST00000621783 NOLC1Q14978 699 aaKnown RBP eCLIP11.62□□□□□ -0.55
CPNE3-212ENST00000621783 SYCP1Q15431 976 aa11.62□□□□□ -0.55
CPNE3-212ENST00000621783 SNRNP35Q16560 246 aaKnown RBP11.62□□□□□ -0.55
CPNE3-212ENST00000621783 PTGISQ16647 500 aa11.62□□□□□ -0.55
CPNE3-212ENST00000621783 TMEM132AQ24JP5 1023 aa11.62□□□□□ -0.55
CPNE3-212ENST00000621783 ZNF568Q3ZCX4 644 aa11.62□□□□□ -0.55
CPNE3-212ENST00000621783 ATF7IP2Q5U623 682 aa11.62□□□□□ -0.55
CPNE3-212ENST00000621783 TCERG1LQ5VWI1 586 aa11.62□□□□□ -0.55
CPNE3-212ENST00000621783 EEF1DP3Q658K8 133 aa11.62□□□□□ -0.55
CPNE3-212ENST00000621783 SPECC1LQ69YQ0 1117 aa11.62□□□□□ -0.55
CPNE3-212ENST00000621783 MPZL3Q6UWV2 235 aa11.62□□□□□ -0.55
CPNE3-212ENST00000621783 TSHZ1Q6ZSZ6 1077 aa11.62□□□□□ -0.55
CPNE3-212ENST00000621783 INTS8Q75QN2 995 aaKnown RBP11.62□□□□□ -0.55
CPNE3-212ENST00000621783 NME8Q8N427 588 aa11.62□□□□□ -0.55
CPNE3-212ENST00000621783 RDH13Q8NBN7 331 aa11.62□□□□□ -0.55
CPNE3-212ENST00000621783 PLEKHO2Q8TD55 490 aa11.62□□□□□ -0.55
CPNE3-212ENST00000621783 SLC35C1Q96A29 364 aa11.62□□□□□ -0.55
CPNE3-212ENST00000621783 ZNF333Q96JL9 665 aa11.62□□□□□ -0.55
CPNE3-212ENST00000621783 ERGIC2Q96RQ1 377 aa11.62□□□□□ -0.55
CPNE3-212ENST00000621783 RNF208Q9H0X6 261 aa11.62□□□□□ -0.55
CPNE3-212ENST00000621783 STARD7Q9NQZ5 370 aa11.62□□□□□ -0.55
CPNE3-212ENST00000621783 IMPACTQ9P2X3 320 aa11.62□□□□□ -0.55
CPNE3-212ENST00000621783 AGO2Q9UKV8 859 aaKnown RBP11.62□□□□□ -0.55
CPNE3-212ENST00000621783 OGDHLQ9ULD0 1010 aa11.62□□□□□ -0.55
CPNE3-212ENST00000621783 TNFSF13BQ9Y275 285 aa11.62□□□□□ -0.55
CPNE3-212ENST00000621783 TRPV2Q9Y5S1 764 aa11.62□□□□□ -0.55
CPNE3-212ENST00000621783 CLDN3O15551 220 aa11.61□□□□□ -0.55
CPNE3-212ENST00000621783 ARF4P18085 180 aaPredicted RBP11.61□□□□□ -0.55
CPNE3-212ENST00000621783 FGFR4P22455 802 aa11.61□□□□□ -0.55
CPNE3-212ENST00000621783 VAMP7P51809 220 aa11.61□□□□□ -0.55
CPNE3-212ENST00000621783 CRYBB1P53674 252 aaPredicted RBP11.61□□□□□ -0.55
CPNE3-212ENST00000621783 MCL1Q07820 350 aa11.61□□□□□ -0.55
CPNE3-212ENST00000621783 CYP24A1Q07973 514 aa11.61□□□□□ -0.55
CPNE3-212ENST00000621783 KCNH2Q12809 1159 aa11.61□□□□□ -0.55
CPNE3-212ENST00000621783 TBX2Q13207 712 aaPredicted RBP11.61□□□□□ -0.55
CPNE3-212ENST00000621783 SNX17Q15036 470 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms