RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 PMS1P54277 932 aaKnown RBP8.9□□□□□ -0.99
ALMS1-208ENST00000620466 KIAA1755Q5JYT7 1200 aa8.9□□□□□ -0.99
ALMS1-208ENST00000620466 TMTC4Q5T4D3 741 aa8.9□□□□□ -0.99
ALMS1-208ENST00000620466 OR6B2Q6IFH4 312 aa8.9□□□□□ -0.99
ALMS1-208ENST00000620466 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.9□□□□□ -0.993e-6■■■■■ 50.8
ALMS1-208ENST00000620466 RNF25Q96BH1 459 aaPredicted RBP8.9□□□□□ -0.99
ALMS1-208ENST00000620466 CDHR1Q96JP9 859 aa8.9□□□□□ -0.99
ALMS1-208ENST00000620466 INO80BQ9C086 356 aaPredicted RBP8.9□□□□□ -0.99
ALMS1-208ENST00000620466 SEMA6BQ9H3T3 888 aa8.9□□□□□ -0.99
ALMS1-208ENST00000620466 NOP53Q9NZM5 478 aaKnown RBP8.9□□□□□ -0.99
ALMS1-208ENST00000620466 CPSF3Q9UKF6 684 aaKnown RBP8.9□□□□□ -0.99
ALMS1-208ENST00000620466 BAG5Q9UL15 447 aa8.9□□□□□ -0.99
ALMS1-208ENST00000620466 CYP26A1O43174 497 aa8.9□□□□□ -0.99
ALMS1-208ENST00000620466 FMO5P49326 533 aa8.9□□□□□ -0.99
ALMS1-208ENST00000620466 SLFN12LQ6IEE8 588 aa8.9□□□□□ -0.99
ALMS1-208ENST00000620466 TTI2Q6NXR4 508 aa8.9□□□□□ -0.99
ALMS1-208ENST00000620466 TMEM270Q6UE05 265 aa8.9□□□□□ -0.99
ALMS1-208ENST00000620466 PDCD7Q8N8D1 485 aaKnown RBP8.9□□□□□ -0.99
ALMS1-208ENST00000620466 DEPDC1BQ8WUY9 529 aa8.9□□□□□ -0.99
ALMS1-208ENST00000620466 GSTA4O15217 222 aa8.89□□□□□ -0.99
ALMS1-208ENST00000620466 MYBL1P10243 752 aa8.89□□□□□ -0.99
ALMS1-208ENST00000620466 DALRD3Q5D0E6 543 aaKnown RBP8.89□□□□□ -0.99
ALMS1-208ENST00000620466 GJB7Q6PEY0 223 aa8.89□□□□□ -0.99
ALMS1-208ENST00000620466 MAML1Q92585 1016 aa8.89□□□□□ -0.99
ALMS1-208ENST00000620466 ISCUQ9H1K1 167 aa8.89□□□□□ -0.99
ALMS1-208ENST00000620466 INTUQ9ULD6 942 aa8.89□□□□□ -0.99
ALMS1-208ENST00000620466 IPO5O00410 1097 aaKnown RBP8.89□□□□□ -0.99
ALMS1-208ENST00000620466 TOM1L1O75674 476 aa8.89□□□□□ -0.99
ALMS1-208ENST00000620466 INPP1P49441 399 aa8.89□□□□□ -0.99
ALMS1-208ENST00000620466 PDE1BQ01064 536 aa8.89□□□□□ -0.99
ALMS1-208ENST00000620466 THOC5Q13769 683 aaKnown RBP8.89□□□□□ -0.99
ALMS1-208ENST00000620466 KRT33BQ14525 404 aa8.89□□□□□ -0.99
ALMS1-208ENST00000620466 HP1BP3Q5SSJ5 553 aaPredicted RBP8.89□□□□□ -0.99
ALMS1-208ENST00000620466 AGBL2Q5U5Z8 902 aa8.89□□□□□ -0.99
ALMS1-208ENST00000620466 KRT39Q6A163 491 aa8.89□□□□□ -0.99
ALMS1-208ENST00000620466 SP8Q8IXZ3 490 aa8.89□□□□□ -0.99
ALMS1-208ENST00000620466 GANCQ8TET4 914 aa8.89□□□□□ -0.99
ALMS1-208ENST00000620466 TBC1D22BQ9NU19 505 aa8.89□□□□□ -0.99
ALMS1-208ENST00000620466 FAM8A1Q9UBU6 413 aa8.89□□□□□ -0.99
ALMS1-208ENST00000620466 TTC7AQ9ULT0 858 aaPredicted RBP8.89□□□□□ -0.99
ALMS1-208ENST00000620466 WDR64B1ANS9 1081 aa8.89□□□□□ -0.99
ALMS1-208ENST00000620466 NVLO15381 856 aaKnown RBP8.89□□□□□ -0.99
ALMS1-208ENST00000620466 ZRANB2O95218 330 aaKnown RBP eCLIP8.89□□□□□ -0.99
ALMS1-208ENST00000620466 LSP1P33241 339 aa8.89□□□□□ -0.99
ALMS1-208ENST00000620466 HSPA9P38646 679 aaKnown RBP8.89□□□□□ -0.99
ALMS1-208ENST00000620466 QARSP47897 775 aaKnown RBP8.89□□□□□ -0.99
ALMS1-208ENST00000620466 EDRF1Q3B7T1 1238 aa8.89□□□□□ -0.99
ALMS1-208ENST00000620466 KLHDC7AQ5VTJ3 777 aa8.89□□□□□ -0.99
ALMS1-208ENST00000620466 DDX42Q86XP3 938 aaKnown RBP eCLIP8.89□□□□□ -0.99
ALMS1-208ENST00000620466 TPX2Q9ULW0 747 aaKnown RBP8.89□□□□□ -0.99
ALMS1-208ENST00000620466 CAPN6Q9Y6Q1 641 aa8.89□□□□□ -0.99
ALMS1-208ENST00000620466 K7ERI5 159 aa8.89□□□□□ -0.99
ALMS1-208ENST00000620466 SMIM24O75264 130 aa8.89□□□□□ -0.99
ALMS1-208ENST00000620466 LDHAP00338 332 aaKnown RBP8.89□□□□□ -0.99
ALMS1-208ENST00000620466 KRT10P13645 584 aa8.89□□□□□ -0.99
ALMS1-208ENST00000620466 BRAFP15056 766 aa8.89□□□□□ -0.99
ALMS1-208ENST00000620466 EPHA7Q15375 998 aa8.89□□□□□ -0.99
ALMS1-208ENST00000620466 ZNF394Q53GI3 561 aa8.89□□□□□ -0.99
ALMS1-208ENST00000620466 EEPD1Q7L9B9 569 aa8.89□□□□□ -0.99
ALMS1-208ENST00000620466 TRIM59Q8IWR1 403 aa8.89□□□□□ -0.99
ALMS1-208ENST00000620466 CCNYQ8ND76 341 aa8.89□□□□□ -0.99
ALMS1-208ENST00000620466 ATP6V1E2Q96A05 226 aa8.89□□□□□ -0.99
ALMS1-208ENST00000620466 HEXIM2Q96MH2 286 aaKnown RBP8.89□□□□□ -0.99
ALMS1-208ENST00000620466 CELF4Q9BZC1 486 aaKnown RBP8.89□□□□□ -0.99
ALMS1-208ENST00000620466 GOLPH3Q9H4A6 298 aa8.89□□□□□ -0.99
ALMS1-208ENST00000620466 VCX3AQ9NNX9 186 aa8.89□□□□□ -0.99
ALMS1-208ENST00000620466 FAM217BQ9NTX9 383 aaPredicted RBP8.89□□□□□ -0.99
ALMS1-208ENST00000620466 L1RE1Q9UN81 338 aa8.89□□□□□ -0.99
ALMS1-208ENST00000620466 FIS1Q9Y3D6 152 aa8.89□□□□□ -0.99
ALMS1-208ENST00000620466 USH1CQ9Y6N9 552 aa8.89□□□□□ -0.99
ALMS1-208ENST00000620466 PRPSAP2O60256 369 aa8.89□□□□□ -0.99
ALMS1-208ENST00000620466 SPAG7O75391 227 aa8.89□□□□□ -0.99
ALMS1-208ENST00000620466 SASH3O75995 380 aa8.89□□□□□ -0.99
ALMS1-208ENST00000620466 ARL4CP56559 192 aa8.89□□□□□ -0.99
ALMS1-208ENST00000620466 DRP2Q13474 957 aa8.89□□□□□ -0.99
ALMS1-208ENST00000620466 ZC2HC1CQ53FD0 456 aaPredicted RBP8.89□□□□□ -0.99
ALMS1-208ENST00000620466 MCUQ8NE86 351 aa8.89□□□□□ -0.99
ALMS1-208ENST00000620466 FAF2Q96CS3 445 aa8.89□□□□□ -0.99
ALMS1-208ENST00000620466 ATF5Q9Y2D1 282 aaPredicted RBP8.89□□□□□ -0.99
ALMS1-208ENST00000620466 A0A0G2JND7 137 aa8.88□□□□□ -0.99
ALMS1-208ENST00000620466 PHF20L1A8MW92 1017 aa8.88□□□□□ -0.99
ALMS1-208ENST00000620466 SRGAP2CP0DJJ0 459 aa8.88□□□□□ -0.99
ALMS1-208ENST00000620466 SMARCA1P28370 1054 aa8.88□□□□□ -0.99
ALMS1-208ENST00000620466 MYO1EQ12965 1108 aa8.88□□□□□ -0.99
ALMS1-208ENST00000620466 PCGF5Q86SE9 256 aa8.88□□□□□ -0.99
ALMS1-208ENST00000620466 SEPT12Q8IYM1 358 aa8.88□□□□□ -0.99
ALMS1-208ENST00000620466 SPDL1Q96EA4 605 aa8.88□□□□□ -0.99
ALMS1-208ENST00000620466 TTC25Q96NG3 672 aa8.88□□□□□ -0.99
ALMS1-208ENST00000620466 RMDN3Q96TC7 470 aa8.88□□□□□ -0.99
ALMS1-208ENST00000620466 KBTBD4Q9NVX7 518 aa8.88□□□□□ -0.99
ALMS1-208ENST00000620466 ZNF446Q9NWS9 450 aa8.88□□□□□ -0.99
ALMS1-208ENST00000620466 LMCD1Q9NZU5 365 aa8.88□□□□□ -0.99
ALMS1-208ENST00000620466 ZFP69BQ9UJL9 534 aa8.88□□□□□ -0.99
ALMS1-208ENST00000620466 MAP3K7O43318 606 aa8.88□□□□□ -0.99
ALMS1-208ENST00000620466 TTC4O95801 387 aa8.88□□□□□ -0.99
ALMS1-208ENST00000620466 GNA15P30679 374 aa8.88□□□□□ -0.99
ALMS1-208ENST00000620466 NBPF9Q3BBW0 867 aa8.88□□□□□ -0.99
ALMS1-208ENST00000620466 KRT27Q7Z3Y8 459 aa8.88□□□□□ -0.99
ALMS1-208ENST00000620466 IFT122Q9HBG6 1241 aa8.88□□□□□ -0.99
ALMS1-208ENST00000620466 AGTP01019 485 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms