RNA–Protein interactions for RNA: ENST00000619898.4

SPCS1-206, Transcript of signal peptidase complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPCS1, Length 4,254 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-206ENST00000619898 SPARCL1Q14515 664 aa13.16□□□□□ -0.3
SPCS1-206ENST00000619898 KRT39Q6A163 491 aa13.16□□□□□ -0.3
SPCS1-206ENST00000619898 CNPY4Q8N129 248 aa13.16□□□□□ -0.3
SPCS1-206ENST00000619898 ADAM22Q9P0K1 906 aa13.16□□□□□ -0.3
SPCS1-206ENST00000619898 TRAF3IP3Q9Y228 551 aa13.16□□□□□ -0.3
SPCS1-206ENST00000619898 CNTNAP4Q9C0A0 1308 aa13.16□□□□□ -0.3
SPCS1-206ENST00000619898 A0A0A6YYK5 440 aaPredicted RBP13.16□□□□□ -0.3
SPCS1-206ENST00000619898 EIF4E1BA6NMX2 242 aaKnown RBP13.16□□□□□ -0.3
SPCS1-206ENST00000619898 EIF3DO15371 548 aaKnown RBP eCLIP13.16□□□□□ -0.3
SPCS1-206ENST00000619898 KRT19P08727 400 aa13.16□□□□□ -0.3
SPCS1-206ENST00000619898 NPEPPSP55786 919 aa13.16□□□□□ -0.3
SPCS1-206ENST00000619898 EPHA7Q15375 998 aa13.16□□□□□ -0.3
SPCS1-206ENST00000619898 EAPPQ56P03 285 aaPredicted RBP13.16□□□□□ -0.3
SPCS1-206ENST00000619898 MIGA2Q7L4E1 593 aa13.16□□□□□ -0.3
SPCS1-206ENST00000619898 TRIM6Q9C030 488 aaPredicted RBP13.16□□□□□ -0.3
SPCS1-206ENST00000619898 SEMA4AQ9H3S1 761 aa13.16□□□□□ -0.3
SPCS1-206ENST00000619898 NYAP2Q9P242 653 aa13.16□□□□□ -0.3
SPCS1-206ENST00000619898 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.16□□□□□ -0.3
SPCS1-206ENST00000619898 NDC80O14777 642 aa13.15□□□□□ -0.3
SPCS1-206ENST00000619898 TRAPPC3O43617 180 aa13.15□□□□□ -0.3
SPCS1-206ENST00000619898 SPAG7O75391 227 aa13.15□□□□□ -0.3
SPCS1-206ENST00000619898 COBLL1Q53SF7 1204 aa13.15□□□□□ -0.3
SPCS1-206ENST00000619898 RILPQ96NA2 401 aa13.15□□□□□ -0.3
SPCS1-206ENST00000619898 FAM129AQ9BZQ8 928 aa13.15□□□□□ -0.3
SPCS1-206ENST00000619898 GANQ9H2C0 597 aa13.15□□□□□ -0.3
SPCS1-206ENST00000619898 SLC24A3Q9HC58 644 aa13.15□□□□□ -0.3
SPCS1-206ENST00000619898 SEPT9Q9UHD8 586 aaPredicted RBP13.15□□□□□ -0.3
SPCS1-206ENST00000619898 ATF5Q9Y2D1 282 aaPredicted RBP13.15□□□□□ -0.3
SPCS1-206ENST00000619898 ARL2BPQ9Y2Y0 163 aa13.15□□□□□ -0.3
SPCS1-206ENST00000619898 IVNS1ABPQ9Y6Y0 642 aa13.15□□□□□ -0.3
SPCS1-206ENST00000619898 CES2O00748 559 aa13.15□□□□□ -0.3
SPCS1-206ENST00000619898 PLS3P13797 630 aa13.15□□□□□ -0.3
SPCS1-206ENST00000619898 PTENP60484 403 aa13.15□□□□□ -0.3
SPCS1-206ENST00000619898 ECM1Q16610 540 aa13.15□□□□□ -0.3
SPCS1-206ENST00000619898 TRMT10CQ7L0Y3 403 aaKnown RBP13.15□□□□□ -0.3
SPCS1-206ENST00000619898 SLC17A8Q8NDX2 589 aa13.15□□□□□ -0.3
SPCS1-206ENST00000619898 FGFBP2Q9BYJ0 223 aa13.15□□□□□ -0.3
SPCS1-206ENST00000619898 NOD2Q9HC29 1040 aa13.15□□□□□ -0.3
SPCS1-206ENST00000619898 TXNDC16Q9P2K2 825 aa13.15□□□□□ -0.3
SPCS1-206ENST00000619898 MYH8P13535 1937 aa13.15□□□□□ -0.3
SPCS1-206ENST00000619898 RAD17O75943 681 aa13.15□□□□□ -0.3
SPCS1-206ENST00000619898 SARNPP82979 210 aaKnown RBP13.15□□□□□ -0.3
SPCS1-206ENST00000619898 CAV1Q03135 178 aa13.15□□□□□ -0.3
SPCS1-206ENST00000619898 NFIAQ12857 509 aa13.15□□□□□ -0.3
SPCS1-206ENST00000619898 RASA3Q14644 834 aa13.15□□□□□ -0.3
SPCS1-206ENST00000619898 ANKRD20A8PQ5CZ79 823 aa13.15□□□□□ -0.3
SPCS1-206ENST00000619898 ZSWIM1Q9BR11 485 aa13.15□□□□□ -0.3
SPCS1-206ENST00000619898 FAM167BQ9BTA0 163 aa13.15□□□□□ -0.3
SPCS1-206ENST00000619898 ADAM33Q9BZ11 813 aa13.15□□□□□ -0.3
SPCS1-206ENST00000619898 GOLGA8SH3BPF8 625 aa13.14□□□□□ -0.31
SPCS1-206ENST00000619898 P4HBP07237 508 aaKnown RBP13.14□□□□□ -0.31
SPCS1-206ENST00000619898 SCP2P22307 547 aa13.14□□□□□ -0.31
SPCS1-206ENST00000619898 COILP38432 576 aaPredicted RBP13.14□□□□□ -0.31
SPCS1-206ENST00000619898 KCNA1Q09470 495 aa13.14□□□□□ -0.31
SPCS1-206ENST00000619898 IZUMO3Q5VZ72 239 aa13.14□□□□□ -0.31
SPCS1-206ENST00000619898 BTBD6Q96KE9 485 aa13.14□□□□□ -0.31
SPCS1-206ENST00000619898 LRRC37BQ96QE4 947 aa13.14□□□□□ -0.31
SPCS1-206ENST00000619898 HSPBP1Q9NZL4 362 aa13.14□□□□□ -0.31
SPCS1-206ENST00000619898 DENND3A2RUS2 1198 aa13.14□□□□□ -0.31
SPCS1-206ENST00000619898 DIAPH2O60879 1101 aa13.14□□□□□ -0.31
SPCS1-206ENST00000619898 LCA5LO95447 670 aa13.14□□□□□ -0.31
SPCS1-206ENST00000619898 POLGP54098 1239 aaPredicted RBP13.14□□□□□ -0.31
SPCS1-206ENST00000619898 YWHAGP61981 247 aaKnown RBP eCLIP13.14□□□□□ -0.31
SPCS1-206ENST00000619898 COG2Q14746 738 aa13.14□□□□□ -0.31
SPCS1-206ENST00000619898 HADHQ16836 314 aaKnown RBP13.14□□□□□ -0.31
SPCS1-206ENST00000619898 SLC13A5Q86YT5 568 aaPredicted RBP13.14□□□□□ -0.31
SPCS1-206ENST00000619898 FAM118BQ9BPY3 351 aa13.14□□□□□ -0.31
SPCS1-206ENST00000619898 POLR3CQ9BUI4 534 aaPredicted RBP13.14□□□□□ -0.31
SPCS1-206ENST00000619898 PRR12Q9ULL5 1215 aa13.14□□□□□ -0.31
SPCS1-206ENST00000619898 SUGT1Q9Y2Z0 365 aa13.14□□□□□ -0.31
SPCS1-206ENST00000619898 C5P01031 1676 aa13.14□□□□□ -0.31
SPCS1-206ENST00000619898 QARSP47897 775 aaKnown RBP13.14□□□□□ -0.31
SPCS1-206ENST00000619898 BBS9Q3SYG4 887 aa13.14□□□□□ -0.31
SPCS1-206ENST00000619898 LGSNQ5TDP6 509 aa13.14□□□□□ -0.31
SPCS1-206ENST00000619898 COL23A1Q86Y22 540 aaPredicted RBP13.14□□□□□ -0.31
SPCS1-206ENST00000619898 CYP2W1Q8TAV3 490 aa13.14□□□□□ -0.31
SPCS1-206ENST00000619898 SLC20A1Q8WUM9 679 aa13.14□□□□□ -0.31
SPCS1-206ENST00000619898 FAM81BQ96LP2 452 aa13.14□□□□□ -0.31
SPCS1-206ENST00000619898 YY1AP1Q9H869 796 aa13.14□□□□□ -0.31
SPCS1-206ENST00000619898 CRYBG1Q9Y4K1 1723 aa13.14□□□□□ -0.31
SPCS1-206ENST00000619898 RASSF10A6NK89 507 aa13.13□□□□□ -0.31
SPCS1-206ENST00000619898 STAM2O75886 525 aa13.13□□□□□ -0.31
SPCS1-206ENST00000619898 DNAJC24Q6P3W2 148 aa13.13□□□□□ -0.31
SPCS1-206ENST00000619898 FBXL13Q8NEE6 735 aa13.13□□□□□ -0.31
SPCS1-206ENST00000619898 ATP6V0A1Q93050 837 aa13.13□□□□□ -0.31
SPCS1-206ENST00000619898 FERMT1Q9BQL6 677 aa13.13□□□□□ -0.31
SPCS1-206ENST00000619898 FAM213AQ9BRX8 229 aa13.13□□□□□ -0.31
SPCS1-206ENST00000619898 TRPC6Q9Y210 931 aa13.13□□□□□ -0.31
SPCS1-206ENST00000619898 MYH2Q9UKX2 1941 aa13.13□□□□□ -0.31
SPCS1-206ENST00000619898 GOLGA8MH3BSY2 632 aa13.13□□□□□ -0.31
SPCS1-206ENST00000619898 NOL4O94818 638 aa13.13□□□□□ -0.31
SPCS1-206ENST00000619898 TAL1P17542 331 aaPredicted RBP13.13□□□□□ -0.31
SPCS1-206ENST00000619898 MSH2P43246 934 aa13.13□□□□□ -0.31
SPCS1-206ENST00000619898 CENPUQ71F23 418 aa13.13□□□□□ -0.31
SPCS1-206ENST00000619898 PRPF38AQ8NAV1 312 aaKnown RBP13.13□□□□□ -0.31
SPCS1-206ENST00000619898 GEMIN8Q9NWZ8 242 aaKnown RBP13.13□□□□□ -0.31
SPCS1-206ENST00000619898 CPSF2Q9P2I0 782 aaKnown RBP13.13□□□□□ -0.31
SPCS1-206ENST00000619898 UVRAGQ9P2Y5 699 aa13.13□□□□□ -0.31
SPCS1-206ENST00000619898 POLLQ9UGP5 575 aa13.13□□□□□ -0.31
SPCS1-206ENST00000619898 CCDC160A6NGH7 325 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms