RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 PBX1P40424 430 aa14.84□□□□□ -0.03
CNOT3-210ENST00000618939 MAPK6Q16659 721 aa14.84□□□□□ -0.03
CNOT3-210ENST00000618939 DARS2Q6PI48 645 aaKnown RBP14.84□□□□□ -0.03
CNOT3-210ENST00000618939 CYFIP1Q7L576 1253 aa14.84□□□□□ -0.03
CNOT3-210ENST00000618939 JAMLQ86YT9 394 aa14.84□□□□□ -0.03
CNOT3-210ENST00000618939 ACER1Q8TDN7 264 aa14.84□□□□□ -0.03
CNOT3-210ENST00000618939 LPAR1Q92633 364 aa14.84□□□□□ -0.03
CNOT3-210ENST00000618939 CARD9Q9H257 536 aa14.84□□□□□ -0.03
CNOT3-210ENST00000618939 RPAP3Q9H6T3 665 aaPredicted RBP14.84□□□□□ -0.03
CNOT3-210ENST00000618939 MLXIPLQ9NP71 852 aa14.84□□□□□ -0.03
CNOT3-210ENST00000618939 DDX4Q9NQI0 724 aaKnown RBP14.84□□□□□ -0.03
CNOT3-210ENST00000618939 KCNH7Q9NS40 1196 aa14.84□□□□□ -0.03
CNOT3-210ENST00000618939 RBAKQ9NYW8 714 aaPredicted RBP14.84□□□□□ -0.03
CNOT3-210ENST00000618939 LMO7Q8WWI1 1683 aa14.84□□□□□ -0.03
CNOT3-210ENST00000618939 MEFVO15553 781 aaPredicted RBP14.84□□□□□ -0.03
CNOT3-210ENST00000618939 CALB1P05937 261 aa14.84□□□□□ -0.03
CNOT3-210ENST00000618939 PSMC6P62333 389 aa14.84□□□□□ -0.03
CNOT3-210ENST00000618939 KRT17Q04695 432 aa14.84□□□□□ -0.03
CNOT3-210ENST00000618939 ZNF667Q5HYK9 610 aa14.84□□□□□ -0.03
CNOT3-210ENST00000618939 OR6B2Q6IFH4 312 aa14.84□□□□□ -0.03
CNOT3-210ENST00000618939 TRIM72Q6ZMU5 477 aa14.84□□□□□ -0.03
CNOT3-210ENST00000618939 ZNF571Q7Z3V5 609 aaPredicted RBP14.84□□□□□ -0.03
CNOT3-210ENST00000618939 TBC1D1Q86TI0 1168 aaPredicted RBP14.84□□□□□ -0.03
CNOT3-210ENST00000618939 GMCL1Q96IK5 515 aa14.84□□□□□ -0.03
CNOT3-210ENST00000618939 RPF1Q9H9Y2 349 aaKnown RBP14.84□□□□□ -0.03
CNOT3-210ENST00000618939 ZNF302Q9NR11 478 aa14.84□□□□□ -0.03
CNOT3-210ENST00000618939 FBXO28Q9NVF7 368 aa14.84□□□□□ -0.03
CNOT3-210ENST00000618939 HOXC10Q9NYD6 342 aa14.84□□□□□ -0.03
CNOT3-210ENST00000618939 PIM2Q9P1W9 311 aa14.84□□□□□ -0.03
CNOT3-210ENST00000618939 TTC7AQ9ULT0 858 aaPredicted RBP14.84□□□□□ -0.03
CNOT3-210ENST00000618939 MT-ND3P03897 115 aa14.84□□□□□ -0.03
CNOT3-210ENST00000618939 BRAFP15056 766 aa14.84□□□□□ -0.03
CNOT3-210ENST00000618939 ECE1P42892 770 aa14.84□□□□□ -0.03
CNOT3-210ENST00000618939 ZNF473Q8WTR7 871 aaKnown RBP14.84□□□□□ -0.03
CNOT3-210ENST00000618939 SNF8Q96H20 258 aa14.84□□□□□ -0.03
CNOT3-210ENST00000618939 ERP44Q9BS26 406 aa14.84□□□□□ -0.03
CNOT3-210ENST00000618939 PITPNM3Q9BZ71 974 aa14.84□□□□□ -0.03
CNOT3-210ENST00000618939 RGPD1P0DJD0 1748 aa14.83□□□□□ -0.04
CNOT3-210ENST00000618939 P4HA2O15460 535 aa14.83□□□□□ -0.04
CNOT3-210ENST00000618939 DGAT1O75907 488 aa14.83□□□□□ -0.04
CNOT3-210ENST00000618939 COMTP21964 271 aa14.83□□□□□ -0.04
CNOT3-210ENST00000618939 RHBDL3P58872 404 aa14.83□□□□□ -0.04
CNOT3-210ENST00000618939 BAATQ14032 418 aaPredicted RBP14.83□□□□□ -0.04
CNOT3-210ENST00000618939 PLA2G4FQ68DD2 849 aa14.83□□□□□ -0.04
CNOT3-210ENST00000618939 WDR59Q6PJI9 974 aa14.83□□□□□ -0.04
CNOT3-210ENST00000618939 GBP7Q8N8V2 638 aaPredicted RBP14.83□□□□□ -0.04
CNOT3-210ENST00000618939 AGBL1Q96MI9 1066 aa14.83□□□□□ -0.04
CNOT3-210ENST00000618939 SIK3Q9Y2K2 1263 aa14.83□□□□□ -0.04
CNOT3-210ENST00000618939 TTLL3Q9Y4R7 772 aa14.83□□□□□ -0.04
CNOT3-210ENST00000618939 GUCY2CP25092 1073 aa14.83□□□□□ -0.04
CNOT3-210ENST00000618939 Q4G0T1 1027 aa14.83□□□□□ -0.04
CNOT3-210ENST00000618939 CCDC38Q502W7 563 aa14.83□□□□□ -0.04
CNOT3-210ENST00000618939 RSBN1LQ6PCB5 846 aaPredicted RBP14.83□□□□□ -0.04
CNOT3-210ENST00000618939 MICAL1Q8TDZ2 1067 aa14.83□□□□□ -0.04
CNOT3-210ENST00000618939 ARL8AQ96BM9 186 aa14.83□□□□□ -0.04
CNOT3-210ENST00000618939 TLR10Q9BXR5 811 aa14.83□□□□□ -0.04
CNOT3-210ENST00000618939 ACAD9Q9H845 621 aa14.83□□□□□ -0.04
CNOT3-210ENST00000618939 SLC9A2Q9UBY0 812 aa14.83□□□□□ -0.04
CNOT3-210ENST00000618939 CAPN9O14815 690 aa14.83□□□□□ -0.04
CNOT3-210ENST00000618939 ARL1P40616 181 aaPredicted RBP14.83□□□□□ -0.04
CNOT3-210ENST00000618939 MAP7D1Q3KQU3 841 aa14.83□□□□□ -0.04
CNOT3-210ENST00000618939 SDCCAG8Q86SQ7 713 aaPredicted RBP14.83□□□□□ -0.04
CNOT3-210ENST00000618939 HVCN1Q96D96 273 aa14.83□□□□□ -0.04
CNOT3-210ENST00000618939 HSD3B7Q9H2F3 369 aa14.83□□□□□ -0.04
CNOT3-210ENST00000618939 UNC45AQ9H3U1 944 aa14.83□□□□□ -0.04
CNOT3-210ENST00000618939 JPH1Q9HDC5 661 aaPredicted RBP14.83□□□□□ -0.04
CNOT3-210ENST00000618939 TACC3Q9Y6A5 838 aa14.83□□□□□ -0.04
CNOT3-210ENST00000618939 PRPSAP2O60256 369 aa14.82□□□□□ -0.04
CNOT3-210ENST00000618939 ZNF699Q32M78 642 aa14.82□□□□□ -0.04
CNOT3-210ENST00000618939 MEI1Q5TIA1 1274 aa14.82□□□□□ -0.04
CNOT3-210ENST00000618939 ICE2Q659A1 982 aa14.82□□□□□ -0.04
CNOT3-210ENST00000618939 FAM47EQ6ZV65 393 aa14.82□□□□□ -0.04
CNOT3-210ENST00000618939 PRMT6Q96LA8 375 aaPredicted RBP14.82□□□□□ -0.04
CNOT3-210ENST00000618939 THAP2Q9H0W7 228 aa14.82□□□□□ -0.04
CNOT3-210ENST00000618939 AIPL1Q9NZN9 384 aa14.82□□□□□ -0.04
CNOT3-210ENST00000618939 FOXN3O00409 490 aaPredicted RBP14.82□□□□□ -0.04
CNOT3-210ENST00000618939 MAP2K7O14733 419 aa14.82□□□□□ -0.04
CNOT3-210ENST00000618939 HSD17B3P37058 310 aa14.82□□□□□ -0.04
CNOT3-210ENST00000618939 NPEPPSP55786 919 aa14.82□□□□□ -0.04
CNOT3-210ENST00000618939 MTMR2Q13614 643 aa14.82□□□□□ -0.04
CNOT3-210ENST00000618939 SPARCL1Q14515 664 aa14.82□□□□□ -0.04
CNOT3-210ENST00000618939 LRRC31Q6UY01 552 aa14.82□□□□□ -0.04
CNOT3-210ENST00000618939 SESTD1Q86VW0 696 aa14.82□□□□□ -0.04
CNOT3-210ENST00000618939 FAM149B1Q96BN6 582 aa14.82□□□□□ -0.04
CNOT3-210ENST00000618939 FAM167AQ96KS9 214 aa14.82□□□□□ -0.04
CNOT3-210ENST00000618939 TXLNGQ9NUQ3 528 aa14.82□□□□□ -0.04
CNOT3-210ENST00000618939 FBXO40Q9UH90 709 aa14.82□□□□□ -0.04
CNOT3-210ENST00000618939 WDR91A4D1P6 747 aa14.82□□□□□ -0.04
CNOT3-210ENST00000618939 SEC24CP53992 1094 aa14.82□□□□□ -0.04
CNOT3-210ENST00000618939 LRRC14Q15048 493 aa14.82□□□□□ -0.04
CNOT3-210ENST00000618939 AGBL2Q5U5Z8 902 aa14.82□□□□□ -0.04
CNOT3-210ENST00000618939 NKX2-3Q8TAU0 364 aa14.82□□□□□ -0.04
CNOT3-210ENST00000618939 PPP4R1Q8TF05 950 aa14.82□□□□□ -0.04
CNOT3-210ENST00000618939 PSPC1Q8WXF1 523 aaKnown RBP14.82□□□□□ -0.04
CNOT3-210ENST00000618939 HEXIM2Q96MH2 286 aaKnown RBP14.82□□□□□ -0.04
CNOT3-210ENST00000618939 TMEM39BQ9GZU3 492 aa14.82□□□□□ -0.04
CNOT3-210ENST00000618939 IP6K2Q9UHH9 426 aa14.82□□□□□ -0.04
CNOT3-210ENST00000618939 ZNRF3Q9ULT6 936 aa14.82□□□□□ -0.04
CNOT3-210ENST00000618939 ZBTB22O15209 634 aa14.82□□□□□ -0.04
CNOT3-210ENST00000618939 ATMINO43313 823 aaPredicted RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms