RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 PFASO15067 1338 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 F8W8V4 182 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 COPEO14579 308 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 CYP2D6P10635 497 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 JAK3P52333 1124 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 SNAP25P60880 206 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 TFAMQ00059 246 aaKnown RBP3.24□□□□□ -1.89
LPP-221ENST00000618621 C16orf87Q6PH81 154 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 MYCBPAPQ8TBZ2 947 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 RFFLQ8WZ73 363 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 VPS39Q96JC1 886 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 TLR10Q9BXR5 811 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 CD248Q9HCU0 757 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 RBM12Q9NTZ6 932 aaKnown RBP3.24□□□□□ -1.89
LPP-221ENST00000618621 STRIP2Q9ULQ0 834 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 SATB2Q9UPW6 733 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 CFAP43Q8NDM7 1665 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 SLC16A3O15427 465 aaKnown RBP3.24□□□□□ -1.89
LPP-221ENST00000618621 RPS6KA4O75676 772 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 MARK3P27448 753 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 EEF1DP29692 281 aaKnown RBP3.24□□□□□ -1.89
LPP-221ENST00000618621 POLGP54098 1239 aaPredicted RBP3.24□□□□□ -1.89
LPP-221ENST00000618621 GPS1Q13098 491 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 PDIA6Q15084 440 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 LLGL1Q15334 1064 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 TMEM35BQ8NCS4 154 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 EHD4Q9H223 541 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 TAF1DQ9H5J8 278 aaPredicted RBP3.24□□□□□ -1.89
LPP-221ENST00000618621 SENP1Q9P0U3 644 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 PPARGC1AQ9UBK2 798 aaKnown RBP3.24□□□□□ -1.89
LPP-221ENST00000618621 K7ERI5 159 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 STX1BP61266 288 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 AP2B1P63010 937 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 DAB2IPQ5VWQ8 1189 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 PPP1R18Q6NYC8 613 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 DEPDC1BQ8WUY9 529 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 CAVIN3Q969G5 261 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 TMBIM4Q9HC24 238 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 GGA2Q9UJY4 613 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 SAT1P21673 171 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 RAD23BP54727 409 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 HERVK_113P62684 666 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 ERVK-24P63145 666 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 TRIP13Q15645 432 aaPredicted RBP3.24□□□□□ -1.89
LPP-221ENST00000618621 KLHDC7AQ5VTJ3 777 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 PDXDC2PQ6P474 469 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 RSBN1LQ6PCB5 846 aaPredicted RBP3.24□□□□□ -1.89
LPP-221ENST00000618621 ISCA1Q9BUE6 129 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 MSTO1Q9BUK6 570 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 ISCUQ9H1K1 167 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 ATP6V0A4Q9HBG4 840 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 GVINP1Q7Z2Y8 2422 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 A2ML1A8K2U0 1454 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 INO80B-WBP1J3KQ70 363 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 PIK3R2O00459 728 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 TLR3O15455 904 aaKnown RBP3.24□□□□□ -1.89
LPP-221ENST00000618621 KRT10P13645 584 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 ARFIP2P53365 341 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 HDLBPQ00341 1268 aaKnown RBP3.24□□□□□ -1.89
LPP-221ENST00000618621 ICA1Q05084 483 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 GRAPQ13588 217 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 RASSF3Q86WH2 238 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 RTKN2Q8IZC4 609 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 GRAPLQ8TC17 118 aaPredicted RBP3.24□□□□□ -1.89
LPP-221ENST00000618621 CASKIN2Q8WXE0 1202 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 MTBPQ96DY7 904 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 INO80BQ9C086 356 aaPredicted RBP3.24□□□□□ -1.89
LPP-221ENST00000618621 SLC38A10Q9HBR0 1119 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 FAM217BQ9NTX9 383 aaPredicted RBP3.24□□□□□ -1.89
LPP-221ENST00000618621 UVRAGQ9P2Y5 699 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 FAM237AA0A1B0GTK4 181 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 LRRIQ4A6NIV6 560 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 FNTAP49354 379 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 COASYQ13057 564 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 ZBTB17Q13105 803 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 SCARF1Q14162 830 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 TMED2Q15363 201 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 ARL13BQ3SXY8 428 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 EIF1ADQ8N9N8 165 aaKnown RBP3.24□□□□□ -1.89
LPP-221ENST00000618621 GFM2Q969S9 779 aaKnown RBP3.24□□□□□ -1.89
LPP-221ENST00000618621 SERPINB12Q96P63 405 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 MED15Q96RN5 788 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 ERGIC2Q96RQ1 377 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 UBXN6Q9BZV1 441 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 MYH10P35580 1976 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 IGF2BP3O00425 579 aaKnown RBP eCLIP3.24□□□□□ -1.896e-6■■■□□ 17.8
LPP-221ENST00000618621 RTN2O75298 545 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 IL10P22301 178 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 MORF4L2Q15014 288 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 TTI2Q6NXR4 508 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 STX18Q9P2W9 335 aaKnown RBP3.24□□□□□ -1.89
LPP-221ENST00000618621 FAM8A1Q9UBU6 413 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 CSADQ9Y600 493 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 A0A0G2JND7 137 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 LRRIQ3A6PVS8 624 aaPredicted RBP3.24□□□□□ -1.89
LPP-221ENST00000618621 NT5DC1Q5TFE4 455 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 TRIM59Q8IWR1 403 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 SPICE1Q8N0Z3 855 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 RNF139Q8WU17 664 aa3.24□□□□□ -1.89
LPP-221ENST00000618621 HDAC11Q96DB2 347 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms