RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 PTPAQ15257 358 aa17.66■□□□□ 0.42
BRCA1-228ENST00000618469 NAALADL2Q58DX5 795 aa17.66■□□□□ 0.42
BRCA1-228ENST00000618469 CDR2LQ86X02 465 aaPredicted RBP17.66■□□□□ 0.42
BRCA1-228ENST00000618469 SPRYD3Q8NCJ5 442 aa17.66■□□□□ 0.42
BRCA1-228ENST00000618469 PBXIP1Q96AQ6 731 aa17.66■□□□□ 0.42
BRCA1-228ENST00000618469 CALML4Q96GE6 196 aa17.66■□□□□ 0.42
BRCA1-228ENST00000618469 EIF2AQ9BY44 585 aaKnown RBP17.66■□□□□ 0.42
BRCA1-228ENST00000618469 ZSCAN16Q9H4T2 348 aaPredicted RBP17.66■□□□□ 0.42
BRCA1-228ENST00000618469 PRMT7Q9NVM4 692 aaPredicted RBP17.66■□□□□ 0.42
BRCA1-228ENST00000618469 CNTNAP2Q9UHC6 1331 aa17.66■□□□□ 0.42
BRCA1-228ENST00000618469 PRKCBP05771 671 aa17.65■□□□□ 0.42
BRCA1-228ENST00000618469 MAPK6Q16659 721 aa17.65■□□□□ 0.42
BRCA1-228ENST00000618469 TMEM132AQ24JP5 1023 aa17.65■□□□□ 0.42
BRCA1-228ENST00000618469 CTC1Q2NKJ3 1217 aa17.65■□□□□ 0.42
BRCA1-228ENST00000618469 HERC4Q5GLZ8 1057 aaPredicted RBP17.65■□□□□ 0.42
BRCA1-228ENST00000618469 FOXD4L5Q5VV16 416 aaPredicted RBP17.65■□□□□ 0.42
BRCA1-228ENST00000618469 RINT1Q6NUQ1 792 aa17.65■□□□□ 0.42
BRCA1-228ENST00000618469 PPP4R3CPQ6ZMV5 832 aa17.65■□□□□ 0.42
BRCA1-228ENST00000618469 FOXD4L4Q8WXT5 416 aaPredicted RBP17.65■□□□□ 0.42
BRCA1-228ENST00000618469 PRIMPOLQ96LW4 560 aa17.65■□□□□ 0.42
BRCA1-228ENST00000618469 DRC1Q96MC2 740 aa17.65■□□□□ 0.42
BRCA1-228ENST00000618469 ZNF558Q96NG5 402 aa17.65■□□□□ 0.42
BRCA1-228ENST00000618469 USP28Q96RU2 1077 aa17.65■□□□□ 0.42
BRCA1-228ENST00000618469 TRIM6Q9C030 488 aaPredicted RBP17.65■□□□□ 0.42
BRCA1-228ENST00000618469 CSRNP2Q9H175 543 aa17.65■□□□□ 0.42
BRCA1-228ENST00000618469 RSAD1Q9HA92 442 aa17.65■□□□□ 0.42
BRCA1-228ENST00000618469 IPPQ9Y573 584 aa17.65■□□□□ 0.42
BRCA1-228ENST00000618469 MYH11P35749 1972 aa17.65■□□□□ 0.42
BRCA1-228ENST00000618469 TMEM221A6NGB7 291 aa17.64■□□□□ 0.41
BRCA1-228ENST00000618469 M0R296 226 aa17.64■□□□□ 0.41
BRCA1-228ENST00000618469 SLC26A4O43511 780 aa17.64■□□□□ 0.41
BRCA1-228ENST00000618469 ZC3H11AO75152 810 aaKnown RBP eCLIP17.64■□□□□ 0.41
BRCA1-228ENST00000618469 FGF18O76093 207 aa17.64■□□□□ 0.41
BRCA1-228ENST00000618469 NPTXRO95502 500 aa17.64■□□□□ 0.41
BRCA1-228ENST00000618469 PLA2G4BP0C869 781 aa17.64■□□□□ 0.41
BRCA1-228ENST00000618469 PLCG1P19174 1290 aa17.64■□□□□ 0.41
BRCA1-228ENST00000618469 NCLP19338 710 aaKnown RBP17.64■□□□□ 0.41
BRCA1-228ENST00000618469 DNAJB1P25685 340 aa17.64■□□□□ 0.41
BRCA1-228ENST00000618469 RAD51AP2Q09MP3 1159 aa17.64■□□□□ 0.41
BRCA1-228ENST00000618469 DMP1Q13316 513 aaPredicted RBP17.64■□□□□ 0.41
BRCA1-228ENST00000618469 KARSQ15046 597 aaKnown RBP17.64■□□□□ 0.41
BRCA1-228ENST00000618469 NOMO2Q5JPE7 1267 aa17.64■□□□□ 0.41
BRCA1-228ENST00000618469 SLC27A1Q6PCB7 646 aa17.64■□□□□ 0.41
BRCA1-228ENST00000618469 KCNT2Q6UVM3 1135 aa17.64■□□□□ 0.41
BRCA1-228ENST00000618469 AGMOQ6ZNB7 445 aa17.64■□□□□ 0.41
BRCA1-228ENST00000618469 C1orf186Q6ZWK4 172 aa17.64■□□□□ 0.41
BRCA1-228ENST00000618469 DAW1Q8N136 415 aa17.64■□□□□ 0.41
BRCA1-228ENST00000618469 KCTD17Q8N5Z5 321 aa17.64■□□□□ 0.41
BRCA1-228ENST00000618469 SMG8Q8ND04 991 aaKnown RBP17.64■□□□□ 0.41
BRCA1-228ENST00000618469 SPPL3Q8TCT6 385 aa17.64■□□□□ 0.41
BRCA1-228ENST00000618469 URGCPQ8TCY9 931 aa17.64■□□□□ 0.41
BRCA1-228ENST00000618469 POF1BQ8WVV4 589 aa17.64■□□□□ 0.41
BRCA1-228ENST00000618469 RSPH1Q8WYR4 309 aa17.64■□□□□ 0.41
BRCA1-228ENST00000618469 EDAQ92838 391 aa17.64■□□□□ 0.41
BRCA1-228ENST00000618469 APOL6Q9BWW8 343 aa17.64■□□□□ 0.41
BRCA1-228ENST00000618469 CCDC113Q9H0I3 377 aa17.64■□□□□ 0.41
BRCA1-228ENST00000618469 NXF3Q9H4D5 531 aaKnown RBP17.64■□□□□ 0.41
BRCA1-228ENST00000618469 TBC1D13Q9NVG8 400 aa17.64■□□□□ 0.41
BRCA1-228ENST00000618469 CD207Q9UJ71 328 aa17.64■□□□□ 0.41
BRCA1-228ENST00000618469 FBXO2Q9UK22 296 aaPredicted RBP17.64■□□□□ 0.41
BRCA1-228ENST00000618469 HES2Q9Y543 173 aa17.64■□□□□ 0.41
BRCA1-228ENST00000618469 CCDC169A6NNP5 214 aa17.63■□□□□ 0.41
BRCA1-228ENST00000618469 OFD1O75665 1012 aa17.63■□□□□ 0.41
BRCA1-228ENST00000618469 ITGA4P13612 1032 aa17.63■□□□□ 0.41
BRCA1-228ENST00000618469 GUCY2CP25092 1073 aa17.63■□□□□ 0.41
BRCA1-228ENST00000618469 PPM1AP35813 382 aa17.63■□□□□ 0.41
BRCA1-228ENST00000618469 NDUFV1P49821 464 aa17.63■□□□□ 0.41
BRCA1-228ENST00000618469 SLC12A3P55017 1021 aa17.63■□□□□ 0.41
BRCA1-228ENST00000618469 PEX3P56589 373 aa17.63■□□□□ 0.41
BRCA1-228ENST00000618469 RNASELQ05823 741 aaKnown RBP17.63■□□□□ 0.41
BRCA1-228ENST00000618469 MAPK7Q13164 816 aa17.63■□□□□ 0.41
BRCA1-228ENST00000618469 SMAD4Q13485 552 aaKnown RBP17.63■□□□□ 0.41
BRCA1-228ENST00000618469 PRPF4BQ13523 1007 aaKnown RBP17.63■□□□□ 0.41
BRCA1-228ENST00000618469 CAMK1Q14012 370 aa17.63■□□□□ 0.41
BRCA1-228ENST00000618469 FAM187BQ17R55 369 aa17.63■□□□□ 0.41
BRCA1-228ENST00000618469 SPECC1Q5M775 1068 aa17.63■□□□□ 0.41
BRCA1-228ENST00000618469 MRPL10Q7Z7H8 261 aaKnown RBP17.63■□□□□ 0.41
BRCA1-228ENST00000618469 ADGRD2Q7Z7M1 963 aa17.63■□□□□ 0.41
BRCA1-228ENST00000618469 SYT2Q8N9I0 419 aaPredicted RBP17.63■□□□□ 0.41
BRCA1-228ENST00000618469 CNNM3Q8NE01 707 aa17.63■□□□□ 0.41
BRCA1-228ENST00000618469 LRRC15Q8TF66 581 aa17.63■□□□□ 0.41
BRCA1-228ENST00000618469 TIPINQ9BVW5 301 aa17.63■□□□□ 0.41
BRCA1-228ENST00000618469 GBP3Q9H0R5 595 aa17.63■□□□□ 0.41
BRCA1-228ENST00000618469 FZD8Q9H461 694 aa17.63■□□□□ 0.41
BRCA1-228ENST00000618469 USP34Q70CQ2 3546 aa17.63■□□□□ 0.41
BRCA1-228ENST00000618469 PHLPP2Q6ZVD8 1323 aa17.63■□□□□ 0.41
BRCA1-228ENST00000618469 A0A1B0GUA9 196 aa17.62■□□□□ 0.41
BRCA1-228ENST00000618469 TTLL13PA6NNM8 815 aa17.62■□□□□ 0.41
BRCA1-228ENST00000618469 N4BP3O15049 544 aa17.62■□□□□ 0.41
BRCA1-228ENST00000618469 EDN1P05305 212 aa17.62■□□□□ 0.41
BRCA1-228ENST00000618469 MLH1P40692 756 aa17.62■□□□□ 0.41
BRCA1-228ENST00000618469 NPTX2P47972 431 aa17.62■□□□□ 0.41
BRCA1-228ENST00000618469 EFNA5P52803 228 aa17.62■□□□□ 0.41
BRCA1-228ENST00000618469 CACNB1Q02641 598 aaPredicted RBP17.62■□□□□ 0.41
BRCA1-228ENST00000618469 TCF15Q12870 199 aa17.62■□□□□ 0.41
BRCA1-228ENST00000618469 DHX8Q14562 1220 aaKnown RBP17.62■□□□□ 0.41
BRCA1-228ENST00000618469 TRIM67Q6ZTA4 783 aa17.62■□□□□ 0.41
BRCA1-228ENST00000618469 HACE1Q8IYU2 909 aa17.62■□□□□ 0.41
BRCA1-228ENST00000618469 CLIC6Q96NY7 704 aa17.62■□□□□ 0.41
BRCA1-228ENST00000618469 POP1Q99575 1024 aaKnown RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms