RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 C15orf41Q9Y2V0 281 aa15.87■□□□□ 0.13
COL5A1-208ENST00000618395 B2RBV5 119 aa15.87■□□□□ 0.13
COL5A1-208ENST00000618395 LMBR1LQ6UX01 489 aa15.87■□□□□ 0.13
COL5A1-208ENST00000618395 LIMA1Q9UHB6 759 aaKnown RBP15.87■□□□□ 0.13
COL5A1-208ENST00000618395 PCF11O94913 1555 aaKnown RBP15.87■□□□□ 0.13
COL5A1-208ENST00000618395 OR52Z1P0C646 297 aa15.87■□□□□ 0.13
COL5A1-208ENST00000618395 POTEIP0CG38 1075 aa15.87■□□□□ 0.13
COL5A1-208ENST00000618395 PDHBP11177 359 aa15.87■□□□□ 0.13
COL5A1-208ENST00000618395 ARL4AP40617 200 aa15.87■□□□□ 0.13
COL5A1-208ENST00000618395 SLC39A14Q15043 492 aa15.87■□□□□ 0.13
COL5A1-208ENST00000618395 NCF4Q15080 339 aa15.87■□□□□ 0.13
COL5A1-208ENST00000618395 TINF2Q9BSI4 451 aa15.87■□□□□ 0.13
COL5A1-208ENST00000618395 VPS11Q9H270 941 aa15.87■□□□□ 0.13
COL5A1-208ENST00000618395 EPC1Q9H2F5 836 aa15.87■□□□□ 0.13
COL5A1-208ENST00000618395 DNAJC12Q9UKB3 198 aa15.87■□□□□ 0.13
COL5A1-208ENST00000618395 HBS1LQ9Y450 684 aaKnown RBP15.87■□□□□ 0.13
COL5A1-208ENST00000618395 ESYT3A0FGR9 886 aa15.87■□□□□ 0.13
COL5A1-208ENST00000618395 PTPN21Q16825 1174 aa15.87■□□□□ 0.13
COL5A1-208ENST00000618395 THOC7Q6I9Y2 204 aaKnown RBP15.87■□□□□ 0.13
COL5A1-208ENST00000618395 LRRC31Q6UY01 552 aa15.87■□□□□ 0.13
COL5A1-208ENST00000618395 XPO6Q96QU8 1125 aaKnown RBP15.87■□□□□ 0.13
COL5A1-208ENST00000618395 IMPAD1Q9NX62 359 aa15.87■□□□□ 0.13
COL5A1-208ENST00000618395 CCNCP24863 283 aa15.87■□□□□ 0.13
COL5A1-208ENST00000618395 ARID5BQ14865 1188 aa15.87■□□□□ 0.13
COL5A1-208ENST00000618395 DIS3LQ8TF46 1054 aaKnown RBP15.87■□□□□ 0.13
COL5A1-208ENST00000618395 TRIM51Q9BSJ1 452 aa15.87■□□□□ 0.13
COL5A1-208ENST00000618395 CACNA2D2Q9NY47 1150 aa15.87■□□□□ 0.13
COL5A1-208ENST00000618395 CDH16O75309 829 aa15.87■□□□□ 0.13
COL5A1-208ENST00000618395 KRT74Q7RTS7 529 aa15.87■□□□□ 0.13
COL5A1-208ENST00000618395 ZNF554Q86TJ5 538 aa15.87■□□□□ 0.13
COL5A1-208ENST00000618395 TRABDQ9H4I3 376 aa15.87■□□□□ 0.13
COL5A1-208ENST00000618395 CYP26B1Q9NR63 512 aa15.87■□□□□ 0.13
COL5A1-208ENST00000618395 UVRAGQ9P2Y5 699 aa15.87■□□□□ 0.13
COL5A1-208ENST00000618395 STOML2Q9UJZ1 356 aa15.87■□□□□ 0.13
COL5A1-208ENST00000618395 FAM26FQ5R3K3 315 aa15.86■□□□□ 0.13
COL5A1-208ENST00000618395 GALNT17Q6IS24 598 aa15.86■□□□□ 0.13
COL5A1-208ENST00000618395 CYTH3O43739 400 aa15.86■□□□□ 0.13
COL5A1-208ENST00000618395 CCNYL1Q8N7R7 359 aa15.86■□□□□ 0.13
COL5A1-208ENST00000618395 LENG1Q96BZ8 264 aaPredicted RBP15.86■□□□□ 0.13
COL5A1-208ENST00000618395 ATF4P18848 351 aaPredicted RBP15.86■□□□□ 0.13
COL5A1-208ENST00000618395 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.86■□□□□ 0.13
COL5A1-208ENST00000618395 HDHD2Q9H0R4 259 aa15.86■□□□□ 0.13
COL5A1-208ENST00000618395 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.86■□□□□ 0.13
COL5A1-208ENST00000618395 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.86■□□□□ 0.13
COL5A1-208ENST00000618395 FBXO28Q9NVF7 368 aa15.86■□□□□ 0.13
COL5A1-208ENST00000618395 TNFRSF21O75509 655 aa15.86■□□□□ 0.13
COL5A1-208ENST00000618395 FAM45AQ8TCE6 357 aa15.86■□□□□ 0.13
COL5A1-208ENST00000618395 AK8Q96MA6 479 aa15.86■□□□□ 0.13
COL5A1-208ENST00000618395 DSCC1Q9BVC3 393 aa15.86■□□□□ 0.13
COL5A1-208ENST00000618395 C2CD2Q9Y426 696 aa15.86■□□□□ 0.13
COL5A1-208ENST00000618395 GUCA1CO95843 209 aa15.86■□□□□ 0.13
COL5A1-208ENST00000618395 ARHGEF37A1IGU5 675 aa15.86■□□□□ 0.13
COL5A1-208ENST00000618395 GOLGA8SH3BPF8 625 aa15.86■□□□□ 0.13
COL5A1-208ENST00000618395 RBM41Q96IZ5 413 aaKnown RBP15.86■□□□□ 0.13
COL5A1-208ENST00000618395 MAP3K13O43283 966 aa15.85■□□□□ 0.13
COL5A1-208ENST00000618395 ARMCX5Q6P1M9 558 aa15.85■□□□□ 0.13
COL5A1-208ENST00000618395 TTC13Q8NBP0 860 aa15.85■□□□□ 0.13
COL5A1-208ENST00000618395 APPL2Q8NEU8 664 aa15.85■□□□□ 0.13
COL5A1-208ENST00000618395 JDP2Q8WYK2 163 aa15.85■□□□□ 0.13
COL5A1-208ENST00000618395 VPS50Q96JG6 964 aa15.85■□□□□ 0.13
COL5A1-208ENST00000618395 PPCSQ9HAB8 311 aa15.85■□□□□ 0.13
COL5A1-208ENST00000618395 PRPSAP2O60256 369 aa15.85■□□□□ 0.13
COL5A1-208ENST00000618395 PIK3R1P27986 724 aa15.85■□□□□ 0.13
COL5A1-208ENST00000618395 CCDC153Q494R4 210 aa15.85■□□□□ 0.13
COL5A1-208ENST00000618395 BNIPLQ7Z465 357 aa15.85■□□□□ 0.13
COL5A1-208ENST00000618395 KIFC1Q9BW19 673 aa15.85■□□□□ 0.13
COL5A1-208ENST00000618395 APPL1Q9UKG1 709 aa15.85■□□□□ 0.13
COL5A1-208ENST00000618395 SCAF11Q99590 1463 aaKnown RBP15.85■□□□□ 0.13
COL5A1-208ENST00000618395 GNB5O14775 395 aa15.85■□□□□ 0.13
COL5A1-208ENST00000618395 KRT77Q7Z794 578 aa15.85■□□□□ 0.13
COL5A1-208ENST00000618395 COPG2Q9UBF2 871 aa15.85■□□□□ 0.13
COL5A1-208ENST00000618395 LCMT1Q9UIC8 334 aa15.85■□□□□ 0.13
COL5A1-208ENST00000618395 AIM2O14862 343 aa15.85■□□□□ 0.13
COL5A1-208ENST00000618395 MED7O43513 233 aa15.85■□□□□ 0.13
COL5A1-208ENST00000618395 PTPREP23469 700 aa15.85■□□□□ 0.13
COL5A1-208ENST00000618395 GPS1Q13098 491 aa15.85■□□□□ 0.13
COL5A1-208ENST00000618395 PACS2Q86VP3 889 aa15.85■□□□□ 0.13
COL5A1-208ENST00000618395 CCSER2Q9H7U1 834 aa15.85■□□□□ 0.13
COL5A1-208ENST00000618395 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.85■□□□□ 0.13
COL5A1-208ENST00000618395 ATXN10Q9UBB4 475 aa15.85■□□□□ 0.13
COL5A1-208ENST00000618395 MYO1GB0I1T2 1018 aa15.85■□□□□ 0.13
COL5A1-208ENST00000618395 DDX39AO00148 427 aaKnown RBP15.85■□□□□ 0.13
COL5A1-208ENST00000618395 COPAP53621 1224 aa15.85■□□□□ 0.13
COL5A1-208ENST00000618395 CCDC137Q6PK04 289 aaKnown RBP15.85■□□□□ 0.13
COL5A1-208ENST00000618395 DDIASQ8IXT1 998 aa15.85■□□□□ 0.13
COL5A1-208ENST00000618395 BLIDQ8IZY5 108 aa15.85■□□□□ 0.13
COL5A1-208ENST00000618395 ZNF710Q8N1W2 664 aa15.85■□□□□ 0.13
COL5A1-208ENST00000618395 MNTQ99583 582 aa15.85■□□□□ 0.13
COL5A1-208ENST00000618395 HDAC6Q9UBN7 1215 aa15.85■□□□□ 0.13
COL5A1-208ENST00000618395 BTBD3Q9Y2F9 522 aa15.85■□□□□ 0.13
COL5A1-208ENST00000618395 ALKBH5Q6P6C2 394 aaKnown RBP15.85■□□□□ 0.13
COL5A1-208ENST00000618395 RALBP11234 206 aa15.84■□□□□ 0.13
COL5A1-208ENST00000618395 ATP4AP20648 1035 aa15.84■□□□□ 0.13
COL5A1-208ENST00000618395 FGFR4P22455 802 aa15.84■□□□□ 0.13
COL5A1-208ENST00000618395 CASP5P51878 434 aa15.84■□□□□ 0.13
COL5A1-208ENST00000618395 PPP4R3CPQ6ZMV5 832 aa15.84■□□□□ 0.13
COL5A1-208ENST00000618395 MSL3Q8N5Y2 521 aaKnown RBP15.84■□□□□ 0.13
COL5A1-208ENST00000618395 C8orf58Q8NAV2 365 aa15.84■□□□□ 0.13
COL5A1-208ENST00000618395 FAM58BPP0C7Q3 252 aa15.84■□□□□ 0.13
COL5A1-208ENST00000618395 LAYNQ6UX15 382 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms