RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 TJAP1Q5JTD0 557 aa11.83□□□□□ -0.51
CCDC144B-208ENST00000618081 CDKL3Q8IVW4 592 aaPredicted RBP11.83□□□□□ -0.51
CCDC144B-208ENST00000618081 RUBCNLQ9H714 662 aa11.83□□□□□ -0.51
CCDC144B-208ENST00000618081 NFU1Q9UMS0 254 aa11.83□□□□□ -0.51
CCDC144B-208ENST00000618081 CTIFO43310 598 aaKnown RBP11.83□□□□□ -0.52
CCDC144B-208ENST00000618081 GGPS1O95749 300 aa11.83□□□□□ -0.52
CCDC144B-208ENST00000618081 SERPINB10P48595 397 aa11.83□□□□□ -0.52
CCDC144B-208ENST00000618081 ANO4Q32M45 955 aa11.83□□□□□ -0.52
CCDC144B-208ENST00000618081 DDIASQ8IXT1 998 aa11.83□□□□□ -0.52
CCDC144B-208ENST00000618081 POLR3FQ9H1D9 316 aaPredicted RBP11.83□□□□□ -0.52
CCDC144B-208ENST00000618081 LSM7Q9UK45 103 aaKnown RBP11.83□□□□□ -0.52
CCDC144B-208ENST00000618081 PCDHB6Q9Y5E3 794 aa11.83□□□□□ -0.52
CCDC144B-208ENST00000618081 GUCY2CP25092 1073 aa11.83□□□□□ -0.52
CCDC144B-208ENST00000618081 TLR7Q9NYK1 1049 aaKnown RBP11.83□□□□□ -0.52
CCDC144B-208ENST00000618081 RRP15Q9Y3B9 282 aaKnown RBP11.83□□□□□ -0.52
CCDC144B-208ENST00000618081 KBTBD13C9JR72 458 aa11.83□□□□□ -0.52
CCDC144B-208ENST00000618081 RNF135Q8IUD6 432 aa11.83□□□□□ -0.52
CCDC144B-208ENST00000618081 PPHLN1Q8NEY8 458 aaKnown RBP11.83□□□□□ -0.52
CCDC144B-208ENST00000618081 OSBPL3Q9H4L5 887 aa11.83□□□□□ -0.52
CCDC144B-208ENST00000618081 ADAMTS1Q9UHI8 967 aa11.83□□□□□ -0.52
CCDC144B-208ENST00000618081 RASGRF1Q13972 1273 aa11.83□□□□□ -0.52
CCDC144B-208ENST00000618081 PODNQ7Z5L7 613 aa11.83□□□□□ -0.52
CCDC144B-208ENST00000618081 ZNF564Q8TBZ8 553 aaPredicted RBP11.83□□□□□ -0.52
CCDC144B-208ENST00000618081 KIF12Q96FN5 646 aa11.83□□□□□ -0.52
CCDC144B-208ENST00000618081 PLAAQ9Y263 795 aa11.83□□□□□ -0.52
CCDC144B-208ENST00000618081 RALBP11234 206 aa11.83□□□□□ -0.52
CCDC144B-208ENST00000618081 SPATA2LQ8IUW3 424 aaPredicted RBP11.83□□□□□ -0.52
CCDC144B-208ENST00000618081 SYNDIG1Q9H7V2 258 aa11.83□□□□□ -0.52
CCDC144B-208ENST00000618081 TRPC7Q9HCX4 862 aa11.83□□□□□ -0.52
CCDC144B-208ENST00000618081 RBAKQ9NYW8 714 aaPredicted RBP11.83□□□□□ -0.52
CCDC144B-208ENST00000618081 STK36Q9NRP7 1315 aa11.83□□□□□ -0.52
CCDC144B-208ENST00000618081 RCSD1Q6JBY9 416 aa11.83□□□□□ -0.52
CCDC144B-208ENST00000618081 ZNF579Q8NAF0 562 aaKnown RBP11.83□□□□□ -0.52
CCDC144B-208ENST00000618081 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.82□□□□□ -0.52
CCDC144B-208ENST00000618081 KNOP1Q1ED39 458 aaKnown RBP11.82□□□□□ -0.52
CCDC144B-208ENST00000618081 FAM102AQ5T9C2 384 aaPredicted RBP11.82□□□□□ -0.52
CCDC144B-208ENST00000618081 TMEM106CQ9BVX2 250 aa11.82□□□□□ -0.52
CCDC144B-208ENST00000618081 ZSCAN32Q9NX65 697 aa11.82□□□□□ -0.52
CCDC144B-208ENST00000618081 CYP2E1P05181 493 aaPredicted RBP11.82□□□□□ -0.52
CCDC144B-208ENST00000618081 KRT16P08779 473 aa11.82□□□□□ -0.52
CCDC144B-208ENST00000618081 PDCLQ13371 301 aa11.82□□□□□ -0.52
CCDC144B-208ENST00000618081 PROSER3Q2NL68 480 aa11.82□□□□□ -0.52
CCDC144B-208ENST00000618081 FASTKD1Q53R41 847 aaKnown RBP11.82□□□□□ -0.52
CCDC144B-208ENST00000618081 PKN3Q6P5Z2 889 aa11.82□□□□□ -0.52
CCDC144B-208ENST00000618081 ACAD9Q9H845 621 aa11.82□□□□□ -0.52
CCDC144B-208ENST00000618081 ADGRL3Q9HAR2 1447 aa11.82□□□□□ -0.52
CCDC144B-208ENST00000618081 RNF103-CHMP3A0A140T963 221 aa11.82□□□□□ -0.52
CCDC144B-208ENST00000618081 TLR2O60603 784 aa11.82□□□□□ -0.52
CCDC144B-208ENST00000618081 CDC25AP30304 524 aa11.82□□□□□ -0.52
CCDC144B-208ENST00000618081 SNF8Q96H20 258 aa11.82□□□□□ -0.52
CCDC144B-208ENST00000618081 YIPF2Q9BWQ6 316 aa11.82□□□□□ -0.52
CCDC144B-208ENST00000618081 RAVER2Q9HCJ3 691 aaKnown RBP11.82□□□□□ -0.52
CCDC144B-208ENST00000618081 ARHGAP31Q2M1Z3 1444 aa11.82□□□□□ -0.52
CCDC144B-208ENST00000618081 SPDYE5A6NIY4 337 aa11.82□□□□□ -0.52
CCDC144B-208ENST00000618081 ASB14A6NK59 587 aa11.82□□□□□ -0.52
CCDC144B-208ENST00000618081 PSMD3O43242 534 aa11.82□□□□□ -0.52
CCDC144B-208ENST00000618081 SKOR1P84550 965 aa11.82□□□□□ -0.52
CCDC144B-208ENST00000618081 E2F5Q15329 346 aa11.82□□□□□ -0.52
CCDC144B-208ENST00000618081 SPDYE7PQ495Y7 208 aa11.82□□□□□ -0.52
CCDC144B-208ENST00000618081 RARS2Q5T160 578 aaKnown RBP11.82□□□□□ -0.52
CCDC144B-208ENST00000618081 CCNYL1Q8N7R7 359 aa11.82□□□□□ -0.52
CCDC144B-208ENST00000618081 STKLD1Q8NE28 680 aa11.82□□□□□ -0.52
CCDC144B-208ENST00000618081 B4GALNT2Q8NHY0 566 aa11.82□□□□□ -0.52
CCDC144B-208ENST00000618081 NDEL1Q9GZM8 345 aa11.82□□□□□ -0.52
CCDC144B-208ENST00000618081 MAP3K4Q9Y6R4 1608 aa11.82□□□□□ -0.52
CCDC144B-208ENST00000618081 SUPT3HO75486 399 aa11.82□□□□□ -0.52
CCDC144B-208ENST00000618081 GCLMP48507 274 aa11.82□□□□□ -0.52
CCDC144B-208ENST00000618081 ABCE1P61221 599 aaKnown RBP11.82□□□□□ -0.52
CCDC144B-208ENST00000618081 SPON2Q9BUD6 331 aa11.82□□□□□ -0.52
CCDC144B-208ENST00000618081 JPH1Q9HDC5 661 aaPredicted RBP11.82□□□□□ -0.52
CCDC144B-208ENST00000618081 RRAGDQ9NQL2 400 aaPredicted RBP11.82□□□□□ -0.52
CCDC144B-208ENST00000618081 BFARQ9NZS9 450 aa11.82□□□□□ -0.52
CCDC144B-208ENST00000618081 C5orf58C9J3I9 102 aa11.82□□□□□ -0.52
CCDC144B-208ENST00000618081 BLVRAP53004 296 aa11.82□□□□□ -0.52
CCDC144B-208ENST00000618081 EIF2B5Q13144 721 aaKnown RBP11.82□□□□□ -0.52
CCDC144B-208ENST00000618081 CCDC85BQ15834 202 aaPredicted RBP11.82□□□□□ -0.52
CCDC144B-208ENST00000618081 C11orf57Q6ZUT1 292 aaPredicted RBP11.82□□□□□ -0.52
CCDC144B-208ENST00000618081 SEPT12Q8IYM1 358 aa11.82□□□□□ -0.52
CCDC144B-208ENST00000618081 HIPK4Q8NE63 616 aa11.82□□□□□ -0.52
CCDC144B-208ENST00000618081 CYP2D7A0A087X1C5 515 aa11.82□□□□□ -0.52
CCDC144B-208ENST00000618081 UBXN8O00124 270 aa11.82□□□□□ -0.52
CCDC144B-208ENST00000618081 PFKFB3Q16875 520 aaPredicted RBP11.82□□□□□ -0.52
CCDC144B-208ENST00000618081 SDE2Q6IQ49 451 aa11.82□□□□□ -0.52
CCDC144B-208ENST00000618081 CATSPER1Q8NEC5 780 aa11.82□□□□□ -0.52
CCDC144B-208ENST00000618081 CCDC90BQ9GZT6 254 aa11.82□□□□□ -0.52
CCDC144B-208ENST00000618081 RCOR1Q9UKL0 485 aa11.82□□□□□ -0.52
CCDC144B-208ENST00000618081 CCDC78A2IDD5 438 aa11.81□□□□□ -0.52
CCDC144B-208ENST00000618081 IL10P22301 178 aa11.81□□□□□ -0.52
CCDC144B-208ENST00000618081 ATP11CQ8NB49 1132 aa11.81□□□□□ -0.52
CCDC144B-208ENST00000618081 RAD54LQ92698 747 aa11.81□□□□□ -0.52
CCDC144B-208ENST00000618081 ZFYVE19Q96K21 471 aa11.81□□□□□ -0.52
CCDC144B-208ENST00000618081 FAM129AQ9BZQ8 928 aa11.81□□□□□ -0.52
CCDC144B-208ENST00000618081 MYH11P35749 1972 aa11.81□□□□□ -0.52
CCDC144B-208ENST00000618081 PFASO15067 1338 aa11.81□□□□□ -0.52
CCDC144B-208ENST00000618081 ZNF335Q9H4Z2 1342 aaPredicted RBP11.81□□□□□ -0.52
CCDC144B-208ENST00000618081 CCDC195A0A1B0GUA6 201 aa11.81□□□□□ -0.52
CCDC144B-208ENST00000618081 STXBP3O00186 592 aa11.81□□□□□ -0.52
CCDC144B-208ENST00000618081 ADRA2BP18089 450 aa11.81□□□□□ -0.52
CCDC144B-208ENST00000618081 EFNA5P52803 228 aa11.81□□□□□ -0.52
CCDC144B-208ENST00000618081 MAP3K7CLP57077 242 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms