RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 CCDC169A6NNP5 214 aa27.44■■□□□ 1.98
PMS1-220ENST00000618056 N4BP3O15049 544 aa27.44■■□□□ 1.98
PMS1-220ENST00000618056 F13A1P00488 732 aa27.44■■□□□ 1.98
PMS1-220ENST00000618056 ARSHQ5FYA8 562 aa27.44■■□□□ 1.98
PMS1-220ENST00000618056 TCEAL5Q5H9L2 206 aa27.44■■□□□ 1.98
PMS1-220ENST00000618056 CDR2LQ86X02 465 aaPredicted RBP27.44■■□□□ 1.98
PMS1-220ENST00000618056 SPRYD3Q8NCJ5 442 aa27.44■■□□□ 1.98
PMS1-220ENST00000618056 RAD54LQ92698 747 aa27.44■■□□□ 1.98
PMS1-220ENST00000618056 SYMPKQ92797 1274 aaKnown RBP27.44■■□□□ 1.98
PMS1-220ENST00000618056 HLA-CQ95604 372 aa27.44■■□□□ 1.98
PMS1-220ENST00000618056 CLIC6Q96NY7 704 aa27.44■■□□□ 1.98
PMS1-220ENST00000618056 RNF39Q9H2S5 420 aa27.44■■□□□ 1.98
PMS1-220ENST00000618056 NXF3Q9H4D5 531 aaKnown RBP27.44■■□□□ 1.98
PMS1-220ENST00000618056 PDZD7Q9H5P4 517 aa27.44■■□□□ 1.98
PMS1-220ENST00000618056 TMEM134Q9H6X4 195 aa27.44■■□□□ 1.98
PMS1-220ENST00000618056 SPG21Q9NZD8 308 aa27.44■■□□□ 1.98
PMS1-220ENST00000618056 HES2Q9Y543 173 aa27.44■■□□□ 1.98
PMS1-220ENST00000618056 TRIP11Q15643 1979 aa27.43■■□□□ 1.98
PMS1-220ENST00000618056 K7ERI5 159 aa27.43■■□□□ 1.98
PMS1-220ENST00000618056 NPTXRO95502 500 aa27.43■■□□□ 1.98
PMS1-220ENST00000618056 ALDH7A1P49419 539 aaKnown RBP27.43■■□□□ 1.98
PMS1-220ENST00000618056 COL19A1Q14993 1142 aa27.43■■□□□ 1.98
PMS1-220ENST00000618056 SPECC1Q5M775 1068 aa27.43■■□□□ 1.98
PMS1-220ENST00000618056 SLC39A11Q8N1S5 342 aa27.43■■□□□ 1.98
PMS1-220ENST00000618056 SPIRE2Q8WWL2 714 aa27.43■■□□□ 1.98
PMS1-220ENST00000618056 NRDE2Q9H7Z3 1164 aa27.43■■□□□ 1.98
PMS1-220ENST00000618056 KMT5AQ9NQR1 393 aa27.43■■□□□ 1.98
PMS1-220ENST00000618056 EDN1P05305 212 aa27.42■■□□□ 1.98
PMS1-220ENST00000618056 PLS3P13797 630 aa27.42■■□□□ 1.98
PMS1-220ENST00000618056 PBX3P40426 434 aa27.42■■□□□ 1.98
PMS1-220ENST00000618056 BCAR1P56945 870 aa27.42■■□□□ 1.98
PMS1-220ENST00000618056 MRPS5P82675 430 aaKnown RBP27.42■■□□□ 1.98
PMS1-220ENST00000618056 RNASELQ05823 741 aaKnown RBP27.42■■□□□ 1.98
PMS1-220ENST00000618056 RAD51AP2Q09MP3 1159 aa27.42■■□□□ 1.98
PMS1-220ENST00000618056 PKP1Q13835 747 aa27.42■■□□□ 1.98
PMS1-220ENST00000618056 STK38Q15208 465 aa27.42■■□□□ 1.98
PMS1-220ENST00000618056 MRPS27Q92552 414 aaKnown RBP27.42■■□□□ 1.98
PMS1-220ENST00000618056 ODF2LQ9ULJ1 636 aa27.42■■□□□ 1.98
PMS1-220ENST00000618056 GIT1Q9Y2X7 761 aa27.42■■□□□ 1.98
PMS1-220ENST00000618056 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP27.41■■□□□ 1.98
PMS1-220ENST00000618056 SFI1A8K8P3 1242 aa27.41■■□□□ 1.98
PMS1-220ENST00000618056 YEATS4O95619 227 aa27.41■■□□□ 1.98
PMS1-220ENST00000618056 LIG1P18858 919 aa27.41■■□□□ 1.98
PMS1-220ENST00000618056 TXLNAP40222 546 aa27.41■■□□□ 1.98
PMS1-220ENST00000618056 AFF1P51825 1210 aaKnown RBP27.41■■□□□ 1.98
PMS1-220ENST00000618056 MCM6Q14566 821 aa27.41■■□□□ 1.98
PMS1-220ENST00000618056 AAK1Q2M2I8 961 aa27.41■■□□□ 1.98
PMS1-220ENST00000618056 GPBP1Q86WP2 473 aa27.41■■□□□ 1.98
PMS1-220ENST00000618056 LARP4BQ92615 738 aaKnown RBP27.41■■□□□ 1.98
PMS1-220ENST00000618056 ASB2Q96Q27 587 aa27.41■■□□□ 1.98
PMS1-220ENST00000618056 TLR9Q9NR96 1032 aa27.41■■□□□ 1.98
PMS1-220ENST00000618056 STK17AQ9UEE5 414 aa27.41■■□□□ 1.98
PMS1-220ENST00000618056 CCDC39Q9UFE4 941 aa27.41■■□□□ 1.98
PMS1-220ENST00000618056 ARL5CA6NH57 179 aa27.4■■□□□ 1.98
PMS1-220ENST00000618056 SPTLC2O15270 562 aa27.4■■□□□ 1.98
PMS1-220ENST00000618056 NCK2O43639 380 aa27.4■■□□□ 1.98
PMS1-220ENST00000618056 ZC3H11AO75152 810 aaKnown RBP eCLIP27.4■■□□□ 1.98
PMS1-220ENST00000618056 PPP6R2O75170 966 aa27.4■■□□□ 1.98
PMS1-220ENST00000618056 IRS1P35568 1242 aa27.4■■□□□ 1.98
PMS1-220ENST00000618056 DDIT3P35638 169 aa27.4■■□□□ 1.98
PMS1-220ENST00000618056 KRT17Q04695 432 aa27.4■■□□□ 1.98
PMS1-220ENST00000618056 TMEM132AQ24JP5 1023 aa27.4■■□□□ 1.98
PMS1-220ENST00000618056 NT5DC1Q5TFE4 455 aa27.4■■□□□ 1.98
PMS1-220ENST00000618056 FOXD4L5Q5VV16 416 aaPredicted RBP27.4■■□□□ 1.98
PMS1-220ENST00000618056 PDE12Q6L8Q7 609 aaKnown RBP27.4■■□□□ 1.98
PMS1-220ENST00000618056 FOXD4L4Q8WXT5 416 aaPredicted RBP27.4■■□□□ 1.98
PMS1-220ENST00000618056 ADPGKQ9BRR6 497 aa27.4■■□□□ 1.98
PMS1-220ENST00000618056 TFIP11Q9UBB9 837 aaKnown RBP27.4■■□□□ 1.98
PMS1-220ENST00000618056 PUF60Q9UHX1 559 aaKnown RBP27.4■■□□□ 1.98
PMS1-220ENST00000618056 TCF20Q9UGU0 1960 aaKnown RBP27.39■■□□□ 1.98
PMS1-220ENST00000618056 TFF2Q03403 129 aa27.39■■□□□ 1.98
PMS1-220ENST00000618056 TJAP1Q5JTD0 557 aa27.39■■□□□ 1.98
PMS1-220ENST00000618056 TAS1R3Q7RTX0 852 aa27.39■■□□□ 1.98
PMS1-220ENST00000618056 ZNF280BQ86YH2 543 aa27.39■■□□□ 1.98
PMS1-220ENST00000618056 PPP2R3CQ969Q6 453 aa27.39■■□□□ 1.98
PMS1-220ENST00000618056 GAD1Q99259 594 aa27.39■■□□□ 1.98
PMS1-220ENST00000618056 REEP2Q9BRK0 252 aa27.39■■□□□ 1.98
PMS1-220ENST00000618056 APOL6Q9BWW8 343 aa27.39■■□□□ 1.98
PMS1-220ENST00000618056 UBE2ZQ9H832 354 aaPredicted RBP27.39■■□□□ 1.98
PMS1-220ENST00000618056 LARSQ9P2J5 1176 aaKnown RBP27.39■■□□□ 1.98
PMS1-220ENST00000618056 USP20Q9Y2K6 914 aa27.39■■□□□ 1.98
PMS1-220ENST00000618056 CITO14578 2027 aa27.39■■□□□ 1.97
PMS1-220ENST00000618056 NPHP3-ACAD11A0A0J9YXS1 232 aa27.38■■□□□ 1.97
PMS1-220ENST00000618056 GALTP07902 379 aa27.38■■□□□ 1.97
PMS1-220ENST00000618056 MLH1P40692 756 aa27.38■■□□□ 1.97
PMS1-220ENST00000618056 SMTNP53814 917 aa27.38■■□□□ 1.97
PMS1-220ENST00000618056 ATF7IP2Q5U623 682 aa27.38■■□□□ 1.97
PMS1-220ENST00000618056 ATL3Q6DD88 541 aa27.38■■□□□ 1.97
PMS1-220ENST00000618056 KCNN1Q92952 543 aa27.38■■□□□ 1.97
PMS1-220ENST00000618056 PABPC5Q96DU9 382 aaKnown RBP27.38■■□□□ 1.97
PMS1-220ENST00000618056 DNAJB4Q9UDY4 337 aa27.38■■□□□ 1.97
PMS1-220ENST00000618056 FSCN2O14926 492 aa27.38■■□□□ 1.97
PMS1-220ENST00000618056 SLC16A4O15374 487 aa27.38■■□□□ 1.97
PMS1-220ENST00000618056 B4GALT3O60512 393 aa27.38■■□□□ 1.97
PMS1-220ENST00000618056 DDHD2O94830 711 aa27.38■■□□□ 1.97
PMS1-220ENST00000618056 CSPG5O95196 566 aa27.38■■□□□ 1.97
PMS1-220ENST00000618056 POMCP01189 267 aa27.38■■□□□ 1.97
PMS1-220ENST00000618056 ZNF131P52739 623 aa27.38■■□□□ 1.97
PMS1-220ENST00000618056 DHX8Q14562 1220 aaKnown RBP27.38■■□□□ 1.97
PMS1-220ENST00000618056 DCAF4L1Q3SXM0 396 aa27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms