RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 LRRC34Q8IZ02 419 aa20■□□□□ 0.79
SPAST-203ENST00000615843 RAPGEF5Q92565 580 aa20■□□□□ 0.79
SPAST-203ENST00000615843 C9orf72Q96LT7 481 aa20■□□□□ 0.79
SPAST-203ENST00000615843 PAGR1Q9BTK6 254 aa20■□□□□ 0.79
SPAST-203ENST00000615843 ASNSD1Q9NWL6 643 aa20■□□□□ 0.79
SPAST-203ENST00000615843 PDS5AQ29RF7 1337 aaKnown RBP20■□□□□ 0.79
SPAST-203ENST00000615843 XPOTO43592 962 aaKnown RBP20■□□□□ 0.79
SPAST-203ENST00000615843 TNFAIP1Q13829 316 aa20■□□□□ 0.79
SPAST-203ENST00000615843 ZBTB10Q96DT7 871 aa20■□□□□ 0.79
SPAST-203ENST00000615843 MTBPQ96DY7 904 aa20■□□□□ 0.79
SPAST-203ENST00000615843 APOL6Q9BWW8 343 aa20■□□□□ 0.79
SPAST-203ENST00000615843 STRIP2Q9ULQ0 834 aa20■□□□□ 0.79
SPAST-203ENST00000615843 H3BRJ5 948 aa19.99■□□□□ 0.79
SPAST-203ENST00000615843 K7ERI5 159 aa19.99■□□□□ 0.79
SPAST-203ENST00000615843 RHPN2Q8IUC4 686 aa19.99■□□□□ 0.79
SPAST-203ENST00000615843 ADAM33Q9BZ11 813 aa19.99■□□□□ 0.79
SPAST-203ENST00000615843 KIF9Q9HAQ2 790 aa19.99■□□□□ 0.79
SPAST-203ENST00000615843 LRRC7Q96NW7 1537 aa19.99■□□□□ 0.79
SPAST-203ENST00000615843 RTN2O75298 545 aa19.99■□□□□ 0.79
SPAST-203ENST00000615843 CYLC2Q14093 348 aaPredicted RBP19.99■□□□□ 0.79
SPAST-203ENST00000615843 PADI6Q6TGC4 694 aa19.99■□□□□ 0.79
SPAST-203ENST00000615843 FAM20AQ96MK3 541 aa19.99■□□□□ 0.79
SPAST-203ENST00000615843 CELF4Q9BZC1 486 aaKnown RBP19.99■□□□□ 0.79
SPAST-203ENST00000615843 LRRC4Q9HBW1 653 aa19.99■□□□□ 0.79
SPAST-203ENST00000615843 USP17L15C9J2P7 530 aa19.99■□□□□ 0.79
SPAST-203ENST00000615843 USP17L13C9JLJ4 530 aa19.99■□□□□ 0.79
SPAST-203ENST00000615843 USP17L11C9JVI0 530 aa19.99■□□□□ 0.79
SPAST-203ENST00000615843 USP17L18D6R9N7 530 aa19.99■□□□□ 0.79
SPAST-203ENST00000615843 USP17L22D6RA61 530 aa19.99■□□□□ 0.79
SPAST-203ENST00000615843 USP17L17D6RBQ6 530 aa19.99■□□□□ 0.79
SPAST-203ENST00000615843 USP17L19D6RCP7 530 aa19.99■□□□□ 0.79
SPAST-203ENST00000615843 USP17L20D6RJB6 530 aa19.99■□□□□ 0.79
SPAST-203ENST00000615843 TDP2O95551 362 aa19.99■□□□□ 0.79
SPAST-203ENST00000615843 ANP32DO95626 131 aa19.99■□□□□ 0.79
SPAST-203ENST00000615843 KRT7P08729 469 aa19.99■□□□□ 0.79
SPAST-203ENST00000615843 USP17L24Q0WX57 530 aa19.99■□□□□ 0.79
SPAST-203ENST00000615843 USP17L6PQ6QN14 398 aa19.99■□□□□ 0.79
SPAST-203ENST00000615843 APLFQ8IW19 511 aaPredicted RBP19.99■□□□□ 0.79
SPAST-203ENST00000615843 TEX2Q8IWB9 1127 aa19.99■□□□□ 0.79
SPAST-203ENST00000615843 NCLNQ969V3 563 aa19.99■□□□□ 0.79
SPAST-203ENST00000615843 ERP44Q9BS26 406 aa19.99■□□□□ 0.79
SPAST-203ENST00000615843 PHF20Q9BVI0 1012 aa19.99■□□□□ 0.79
SPAST-203ENST00000615843 CTDNEP1O95476 244 aa19.99■□□□□ 0.79
SPAST-203ENST00000615843 LDHAP00338 332 aaKnown RBP19.99■□□□□ 0.79
SPAST-203ENST00000615843 PPP1R18Q6NYC8 613 aa19.99■□□□□ 0.79
SPAST-203ENST00000615843 RSRC2Q7L4I2 434 aaKnown RBP19.99■□□□□ 0.79
SPAST-203ENST00000615843 SEL1LQ9UBV2 794 aa19.99■□□□□ 0.79
SPAST-203ENST00000615843 NQO1P15559 274 aaKnown RBP19.99■□□□□ 0.79
SPAST-203ENST00000615843 PRELPP51888 382 aa19.99■□□□□ 0.79
SPAST-203ENST00000615843 ERVK-24P63145 666 aa19.99■□□□□ 0.79
SPAST-203ENST00000615843 DDX56Q9NY93 547 aaKnown RBP19.99■□□□□ 0.79
SPAST-203ENST00000615843 SMARCA1P28370 1054 aa19.98■□□□□ 0.79
SPAST-203ENST00000615843 SNAP25P60880 206 aa19.98■□□□□ 0.79
SPAST-203ENST00000615843 ELOA2Q8IYF1 753 aaPredicted RBP19.98■□□□□ 0.79
SPAST-203ENST00000615843 C7orf25Q9BPX7 421 aa19.98■□□□□ 0.79
SPAST-203ENST00000615843 KLK7P49862 253 aa19.98■□□□□ 0.79
SPAST-203ENST00000615843 STK4Q13043 487 aa19.98■□□□□ 0.79
SPAST-203ENST00000615843 CASKIN2Q8WXE0 1202 aa19.98■□□□□ 0.79
SPAST-203ENST00000615843 CDHR1Q96JP9 859 aa19.98■□□□□ 0.79
SPAST-203ENST00000615843 THTPAQ9BU02 230 aa19.98■□□□□ 0.79
SPAST-203ENST00000615843 PCSK1NQ9UHG2 260 aa19.98■□□□□ 0.79
SPAST-203ENST00000615843 PPP1R12AO14974 1030 aaPredicted RBP19.98■□□□□ 0.79
SPAST-203ENST00000615843 ARHGDIAP52565 204 aa19.98■□□□□ 0.79
SPAST-203ENST00000615843 TRIP10Q15642 601 aa19.98■□□□□ 0.79
SPAST-203ENST00000615843 ANKS1AQ92625 1134 aa19.98■□□□□ 0.79
SPAST-203ENST00000615843 KLHL8Q9P2G9 620 aaPredicted RBP19.98■□□□□ 0.79
SPAST-203ENST00000615843 PDP2Q9P2J9 529 aa19.98■□□□□ 0.79
SPAST-203ENST00000615843 ACADSP16219 412 aa19.98■□□□□ 0.79
SPAST-203ENST00000615843 ROR1Q01973 937 aa19.98■□□□□ 0.79
SPAST-203ENST00000615843 SLC29A2Q14542 456 aa19.98■□□□□ 0.79
SPAST-203ENST00000615843 SH3RF3Q8TEJ3 882 aaPredicted RBP19.98■□□□□ 0.79
SPAST-203ENST00000615843 GCOM2Q9BZD3 368 aaPredicted RBP19.98■□□□□ 0.79
SPAST-203ENST00000615843 KIAA1586Q9HCI6 787 aa19.98■□□□□ 0.79
SPAST-203ENST00000615843 TBC1D23Q9NUY8 699 aa19.98■□□□□ 0.79
SPAST-203ENST00000615843 TMEM51Q9NW97 253 aa19.98■□□□□ 0.79
SPAST-203ENST00000615843 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.97■□□□□ 0.79
SPAST-203ENST00000615843 EMSYQ7Z589 1322 aa19.97■□□□□ 0.79
SPAST-203ENST00000615843 PDXKO00764 312 aa19.97■□□□□ 0.79
SPAST-203ENST00000615843 CLDN3O15551 220 aa19.97■□□□□ 0.79
SPAST-203ENST00000615843 PSAPP07602 524 aa19.97■□□□□ 0.79
SPAST-203ENST00000615843 UCHL3P15374 230 aa19.97■□□□□ 0.79
SPAST-203ENST00000615843 BARGINQ6ZT62 677 aa19.97■□□□□ 0.79
SPAST-203ENST00000615843 ALKBH8Q96BT7 664 aaKnown RBP19.97■□□□□ 0.79
SPAST-203ENST00000615843 PALMDQ9NP74 551 aa19.97■□□□□ 0.79
SPAST-203ENST00000615843 PSMC3IPQ9P2W1 217 aaPredicted RBP19.97■□□□□ 0.79
SPAST-203ENST00000615843 SLC9A2Q9UBY0 812 aa19.97■□□□□ 0.79
SPAST-203ENST00000615843 KIF1BO60333 1816 aa19.97■□□□□ 0.79
SPAST-203ENST00000615843 ITIH4Q14624 930 aa19.97■□□□□ 0.79
SPAST-203ENST00000615843 P3H1Q32P28 736 aa19.97■□□□□ 0.79
SPAST-203ENST00000615843 ZBTB18Q99592 522 aa19.97■□□□□ 0.79
SPAST-203ENST00000615843 DHX36Q9H2U1 1008 aaKnown RBP19.97■□□□□ 0.79
SPAST-203ENST00000615843 DCP1AQ9NPI6 582 aaPredicted RBP19.97■□□□□ 0.79
SPAST-203ENST00000615843 KLRC1P26715 233 aa19.97■□□□□ 0.79
SPAST-203ENST00000615843 ZNF667Q5HYK9 610 aa19.97■□□□□ 0.79
SPAST-203ENST00000615843 HABP4Q5JVS0 413 aaKnown RBP19.97■□□□□ 0.79
SPAST-203ENST00000615843 NIM1KQ8IY84 436 aa19.97■□□□□ 0.79
SPAST-203ENST00000615843 GIMAP8Q8ND71 665 aaPredicted RBP19.97■□□□□ 0.79
SPAST-203ENST00000615843 HIC2Q96JB3 615 aa19.97■□□□□ 0.79
SPAST-203ENST00000615843 UBE4BO95155 1302 aa19.97■□□□□ 0.79
SPAST-203ENST00000615843 B2RBV5 119 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms