RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 KIZQ2M2Z5 673 aa11.85□□□□□ -0.51
COL4A1-205ENST00000615732 SPOUT1Q5T280 376 aaKnown RBP11.85□□□□□ -0.51
COL4A1-205ENST00000615732 SPATA1Q5VX52 437 aa11.85□□□□□ -0.51
COL4A1-205ENST00000615732 CNNM4Q6P4Q7 775 aa11.85□□□□□ -0.51
COL4A1-205ENST00000615732 ABHD15Q6UXT9 468 aa11.85□□□□□ -0.51
COL4A1-205ENST00000615732 RBM23Q86U06 439 aaKnown RBP11.85□□□□□ -0.51
COL4A1-205ENST00000615732 SMYD4Q8IYR2 804 aaPredicted RBP11.85□□□□□ -0.51
COL4A1-205ENST00000615732 PRSS33Q8NF86 280 aa11.85□□□□□ -0.51
COL4A1-205ENST00000615732 SPPL3Q8TCT6 385 aa11.85□□□□□ -0.51
COL4A1-205ENST00000615732 ATP8B4Q8TF62 1192 aa11.85□□□□□ -0.51
COL4A1-205ENST00000615732 POF1BQ8WVV4 589 aa11.85□□□□□ -0.51
COL4A1-205ENST00000615732 NELFBQ8WX92 580 aa11.85□□□□□ -0.51
COL4A1-205ENST00000615732 EDAQ92838 391 aa11.85□□□□□ -0.51
COL4A1-205ENST00000615732 OSMRQ99650 979 aa11.85□□□□□ -0.51
COL4A1-205ENST00000615732 XPO4Q9C0E2 1151 aaKnown RBP11.85□□□□□ -0.51
COL4A1-205ENST00000615732 ERVK-5Q9HDB9 667 aa11.85□□□□□ -0.51
COL4A1-205ENST00000615732 ZNF302Q9NR11 478 aa11.85□□□□□ -0.51
COL4A1-205ENST00000615732 BMP2KQ9NSY1 1161 aaPredicted RBP11.85□□□□□ -0.51
COL4A1-205ENST00000615732 FANCLQ9NW38 375 aa11.85□□□□□ -0.51
COL4A1-205ENST00000615732 BARX2Q9UMQ3 279 aaPredicted RBP11.85□□□□□ -0.51
COL4A1-205ENST00000615732 GDAQ9Y2T3 454 aa11.85□□□□□ -0.51
COL4A1-205ENST00000615732 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.85□□□□□ -0.51
COL4A1-205ENST00000615732 KMT2EQ8IZD2 1858 aa11.85□□□□□ -0.51
COL4A1-205ENST00000615732 IGKV6D-21A0A0A0MT36 114 aa11.84□□□□□ -0.51
COL4A1-205ENST00000615732 DENND3A2RUS2 1198 aa11.84□□□□□ -0.51
COL4A1-205ENST00000615732 TBKBP1A7MCY6 615 aa11.84□□□□□ -0.51
COL4A1-205ENST00000615732 PPP1R3GB7ZBB8 358 aa11.84□□□□□ -0.51
COL4A1-205ENST00000615732 IPO5O00410 1097 aaKnown RBP11.84□□□□□ -0.51
COL4A1-205ENST00000615732 PSMA7O14818 248 aa11.84□□□□□ -0.51
COL4A1-205ENST00000615732 DHX15O43143 795 aaKnown RBP11.84□□□□□ -0.51
COL4A1-205ENST00000615732 KLRC4O43908 158 aa11.84□□□□□ -0.51
COL4A1-205ENST00000615732 HBP1O60381 514 aa11.84□□□□□ -0.51
COL4A1-205ENST00000615732 GAS7O60861 476 aa11.84□□□□□ -0.51
COL4A1-205ENST00000615732 RPS6KA5O75582 802 aa11.84□□□□□ -0.51
COL4A1-205ENST00000615732 RHOBTB3O94955 611 aa11.84□□□□□ -0.51
COL4A1-205ENST00000615732 ATG7O95352 703 aa11.84□□□□□ -0.51
COL4A1-205ENST00000615732 C22orf31O95567 290 aa11.84□□□□□ -0.51
COL4A1-205ENST00000615732 CD44P16070 742 aaKnown RBP11.84□□□□□ -0.51
COL4A1-205ENST00000615732 ATP4AP20648 1035 aa11.84□□□□□ -0.51
COL4A1-205ENST00000615732 CLCN3P51790 818 aa11.84□□□□□ -0.51
COL4A1-205ENST00000615732 HYIQ5T013 277 aa11.84□□□□□ -0.51
COL4A1-205ENST00000615732 FAM102BQ5T8I3 360 aa11.84□□□□□ -0.51
COL4A1-205ENST00000615732 LRCH2Q5VUJ6 765 aa11.84□□□□□ -0.51
COL4A1-205ENST00000615732 SWSAP1Q6NVH7 229 aa11.84□□□□□ -0.51
COL4A1-205ENST00000615732 MIS18BP1Q6P0N0 1132 aa11.84□□□□□ -0.51
COL4A1-205ENST00000615732 UNC13DQ70J99 1090 aa11.84□□□□□ -0.51
COL4A1-205ENST00000615732 FAM228AQ86W67 206 aa11.84□□□□□ -0.51
COL4A1-205ENST00000615732 KIAA0319LQ8IZA0 1049 aa11.84□□□□□ -0.51
COL4A1-205ENST00000615732 EFHBQ8N7U6 833 aa11.84□□□□□ -0.51
COL4A1-205ENST00000615732 SMRP1Q8NCR6 262 aa11.84□□□□□ -0.51
COL4A1-205ENST00000615732 ANKRD20A12PQ8NF67 263 aa11.84□□□□□ -0.51
COL4A1-205ENST00000615732 LRRC15Q8TF66 581 aa11.84□□□□□ -0.51
COL4A1-205ENST00000615732 LENG9Q96B70 501 aa11.84□□□□□ -0.51
COL4A1-205ENST00000615732 ZNF668Q96K58 619 aaPredicted RBP11.84□□□□□ -0.51
COL4A1-205ENST00000615732 ADAM2Q99965 735 aa11.84□□□□□ -0.51
COL4A1-205ENST00000615732 ZNF577Q9BSK1 485 aa11.84□□□□□ -0.51
COL4A1-205ENST00000615732 TEKT3Q9BXF9 490 aa11.84□□□□□ -0.51
COL4A1-205ENST00000615732 BLOC1S4Q9NUP1 217 aa11.84□□□□□ -0.51
COL4A1-205ENST00000615732 TCEAL9Q9UHQ7 104 aa11.84□□□□□ -0.51
COL4A1-205ENST00000615732 RWDD2AQ9UIY3 292 aa11.84□□□□□ -0.51
COL4A1-205ENST00000615732 ST3GAL5Q9UNP4 418 aa11.84□□□□□ -0.51
COL4A1-205ENST00000615732 KIAA1024Q9UPX6 916 aa11.84□□□□□ -0.51
COL4A1-205ENST00000615732 SQORQ9Y6N5 450 aa11.84□□□□□ -0.51
COL4A1-205ENST00000615732 LOXHD1Q8IVV2 1947 aa11.84□□□□□ -0.51
COL4A1-205ENST00000615732 PVALEFA0A1B0GWK0 134 aa11.83□□□□□ -0.52
COL4A1-205ENST00000615732 TMEM221A6NGB7 291 aa11.83□□□□□ -0.52
COL4A1-205ENST00000615732 LOC730098B7Z3J9 87 aa11.83□□□□□ -0.52
COL4A1-205ENST00000615732 M0R296 226 aa11.83□□□□□ -0.52
COL4A1-205ENST00000615732 KRT18P05783 430 aaKnown RBP11.83□□□□□ -0.52
COL4A1-205ENST00000615732 PLA2G4BP0C869 781 aa11.83□□□□□ -0.52
COL4A1-205ENST00000615732 FGFR1P11362 822 aa11.83□□□□□ -0.52
COL4A1-205ENST00000615732 ATP1A3P13637 1013 aa11.83□□□□□ -0.52
COL4A1-205ENST00000615732 IDEP14735 1019 aa11.83□□□□□ -0.52
COL4A1-205ENST00000615732 SLC26A2P50443 739 aa11.83□□□□□ -0.52
COL4A1-205ENST00000615732 GSDMDP57764 484 aa11.83□□□□□ -0.52
COL4A1-205ENST00000615732 SPAG1Q07617 926 aa11.83□□□□□ -0.52
COL4A1-205ENST00000615732 COASYQ13057 564 aa11.83□□□□□ -0.52
COL4A1-205ENST00000615732 IER5LQ5T953 404 aa11.83□□□□□ -0.52
COL4A1-205ENST00000615732 TRIM67Q6ZTA4 783 aa11.83□□□□□ -0.52
COL4A1-205ENST00000615732 NIPA1Q7RTP0 329 aa11.83□□□□□ -0.52
COL4A1-205ENST00000615732 CCDC186Q7Z3E2 898 aa11.83□□□□□ -0.52
COL4A1-205ENST00000615732 TMC6Q7Z403 805 aa11.83□□□□□ -0.52
COL4A1-205ENST00000615732 LRRC71Q8N4P6 559 aa11.83□□□□□ -0.52
COL4A1-205ENST00000615732 METTL13Q8N6R0 699 aa11.83□□□□□ -0.52
COL4A1-205ENST00000615732 PPP2R3CQ969Q6 453 aa11.83□□□□□ -0.52
COL4A1-205ENST00000615732 PCDHB7Q9Y5E2 793 aa11.83□□□□□ -0.52
COL4A1-205ENST00000615732 COL1A2P08123 1366 aa11.82□□□□□ -0.52
COL4A1-205ENST00000615732 BICDL2A1A5D9 508 aa11.82□□□□□ -0.52
COL4A1-205ENST00000615732 MYMKA6NI61 221 aa11.82□□□□□ -0.52
COL4A1-205ENST00000615732 PER2O15055 1255 aa11.82□□□□□ -0.52
COL4A1-205ENST00000615732 CHMP2AO43633 222 aa11.82□□□□□ -0.52
COL4A1-205ENST00000615732 NRDCO43847 1150 aa11.82□□□□□ -0.52
COL4A1-205ENST00000615732 MED24O75448 989 aa11.82□□□□□ -0.52
COL4A1-205ENST00000615732 PBX3P40426 434 aa11.82□□□□□ -0.52
COL4A1-205ENST00000615732 PRCPP42785 496 aa11.82□□□□□ -0.52
COL4A1-205ENST00000615732 CBX2Q14781 532 aaPredicted RBP11.82□□□□□ -0.52
COL4A1-205ENST00000615732 FILIP1LQ4L180 1135 aa11.82□□□□□ -0.52
COL4A1-205ENST00000615732 ZNF484Q5JVG2 852 aa11.82□□□□□ -0.52
COL4A1-205ENST00000615732 DYMQ7RTS9 669 aa11.82□□□□□ -0.52
COL4A1-205ENST00000615732 BMP8AQ7Z5Y6 402 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms