RNA–Protein interactions for RNA: ENST00000615517.4

MUC1-227, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 951 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-227ENST00000615517 ALDH2P05091 517 aa7.8□□□□□ -1.16
MUC1-227ENST00000615517 CXCL12P48061 93 aa7.8□□□□□ -1.16
MUC1-227ENST00000615517 GLUD2P49448 558 aa7.8□□□□□ -1.16
MUC1-227ENST00000615517 NOVA1P51513 510 aaKnown RBP7.8□□□□□ -1.16
MUC1-227ENST00000615517 CCR3P51677 355 aa7.8□□□□□ -1.16
MUC1-227ENST00000615517 DSG1Q02413 1049 aa7.8□□□□□ -1.16
MUC1-227ENST00000615517 ZNF252P-AS1Q0IIN9 211 aa7.8□□□□□ -1.16
MUC1-227ENST00000615517 SWSAP1Q6NVH7 229 aa7.8□□□□□ -1.16
MUC1-227ENST00000615517 EFCAB12Q6NXP0 572 aa7.8□□□□□ -1.16
MUC1-227ENST00000615517 PDXDC2PQ6P474 469 aa7.8□□□□□ -1.16
MUC1-227ENST00000615517 ELMSAN1Q6PJG2 1045 aa7.8□□□□□ -1.16
MUC1-227ENST00000615517 GLB1LQ6UWU2 654 aa7.8□□□□□ -1.16
MUC1-227ENST00000615517 AGMOQ6ZNB7 445 aa7.8□□□□□ -1.16
MUC1-227ENST00000615517 TRMT1LQ7Z2T5 733 aaKnown RBP7.8□□□□□ -1.16
MUC1-227ENST00000615517 GLYCTKQ8IVS8 523 aa7.8□□□□□ -1.16
MUC1-227ENST00000615517 C12orf50Q8NA57 414 aaPredicted RBP7.8□□□□□ -1.16
MUC1-227ENST00000615517 RSPH1Q8WYR4 309 aa7.8□□□□□ -1.16
MUC1-227ENST00000615517 B3GALT6Q96L58 329 aa7.8□□□□□ -1.16
MUC1-227ENST00000615517 SDF4Q9BRK5 362 aa7.8□□□□□ -1.16
MUC1-227ENST00000615517 UBAC1Q9BSL1 405 aa7.8□□□□□ -1.16
MUC1-227ENST00000615517 TRAIPQ9BWF2 469 aa7.8□□□□□ -1.16
MUC1-227ENST00000615517 LMAN1LQ9HAT1 526 aa7.8□□□□□ -1.16
MUC1-227ENST00000615517 AGO4Q9HCK5 861 aaKnown RBP7.8□□□□□ -1.16
MUC1-227ENST00000615517 ZNF302Q9NR11 478 aa7.8□□□□□ -1.16
MUC1-227ENST00000615517 C2orf42Q9NWW7 574 aa7.8□□□□□ -1.16
MUC1-227ENST00000615517 PCDHA6Q9UN73 950 aa7.8□□□□□ -1.16
MUC1-227ENST00000615517 FAN1Q9Y2M0 1017 aa7.8□□□□□ -1.16
MUC1-227ENST00000615517 MRPS17Q9Y2R5 130 aaKnown RBP7.8□□□□□ -1.16
MUC1-227ENST00000615517 PCDHA8Q9Y5H6 950 aa7.8□□□□□ -1.16
MUC1-227ENST00000615517 GON4LQ3T8J9 2241 aa7.8□□□□□ -1.16
MUC1-227ENST00000615517 THADAQ6YHU6 1953 aa7.8□□□□□ -1.16
MUC1-227ENST00000615517 NRG2O14511 850 aaPredicted RBP7.79□□□□□ -1.16
MUC1-227ENST00000615517 ZNF623O75123 536 aa7.79□□□□□ -1.16
MUC1-227ENST00000615517 EPN2O95208 641 aa7.79□□□□□ -1.16
MUC1-227ENST00000615517 C1RP00736 705 aa7.79□□□□□ -1.16
MUC1-227ENST00000615517 CAPNS1P04632 268 aa7.79□□□□□ -1.16
MUC1-227ENST00000615517 MS4A1P11836 297 aa7.79□□□□□ -1.16
MUC1-227ENST00000615517 RPL17P18621 184 aaKnown RBP7.79□□□□□ -1.16
MUC1-227ENST00000615517 CNR2P34972 360 aa7.79□□□□□ -1.16
MUC1-227ENST00000615517 TROAPQ12815 778 aa7.79□□□□□ -1.16
MUC1-227ENST00000615517 PPP2R5DQ14738 602 aa7.79□□□□□ -1.16
MUC1-227ENST00000615517 PLA2G2CQ5R387 149 aa7.79□□□□□ -1.16
MUC1-227ENST00000615517 FAM160B1Q5W0V3 765 aa7.79□□□□□ -1.16
MUC1-227ENST00000615517 HEATR6Q6AI08 1181 aaKnown RBP7.79□□□□□ -1.16
MUC1-227ENST00000615517 C19orf48Q6RUI8 117 aa7.79□□□□□ -1.16
MUC1-227ENST00000615517 LONP2Q86WA8 852 aa7.79□□□□□ -1.16
MUC1-227ENST00000615517 NPAS3Q8IXF0 933 aa7.79□□□□□ -1.16
MUC1-227ENST00000615517 MBOAT7Q96N66 472 aa7.79□□□□□ -1.16
MUC1-227ENST00000615517 TMEM175Q9BSA9 504 aa7.79□□□□□ -1.16
MUC1-227ENST00000615517 IER2Q9BTL4 223 aa7.79□□□□□ -1.16
MUC1-227ENST00000615517 PSTPIP2Q9H939 334 aa7.79□□□□□ -1.16
MUC1-227ENST00000615517 CHST12Q9NRB3 414 aa7.79□□□□□ -1.16
MUC1-227ENST00000615517 CHST7Q9NS84 486 aa7.79□□□□□ -1.16
MUC1-227ENST00000615517 FAM105AQ9NUU6 356 aa7.79□□□□□ -1.16
MUC1-227ENST00000615517 SSX2IPQ9Y2D8 614 aa7.79□□□□□ -1.16
MUC1-227ENST00000615517 PRG3Q9Y2Y8 225 aaPredicted RBP7.79□□□□□ -1.16
MUC1-227ENST00000615517 MAFBQ9Y5Q3 323 aaPredicted RBP7.79□□□□□ -1.16
MUC1-227ENST00000615517 KALRNO60229 2985 aa7.78□□□□□ -1.16
MUC1-227ENST00000615517 DHX15O43143 795 aaKnown RBP7.78□□□□□ -1.16
MUC1-227ENST00000615517 ECI2O75521 394 aa7.78□□□□□ -1.16
MUC1-227ENST00000615517 POMCP01189 267 aa7.78□□□□□ -1.16
MUC1-227ENST00000615517 CHRNB1P11230 501 aa7.78□□□□□ -1.16
MUC1-227ENST00000615517 RAP1GAPP47736 663 aa7.78□□□□□ -1.16
MUC1-227ENST00000615517 DRP2Q13474 957 aa7.78□□□□□ -1.16
MUC1-227ENST00000615517 WDR44Q5JSH3 913 aa7.78□□□□□ -1.16
MUC1-227ENST00000615517 RNF43Q68DV7 783 aa7.78□□□□□ -1.16
MUC1-227ENST00000615517 TWF2Q6IBS0 349 aaKnown RBP7.78□□□□□ -1.16
MUC1-227ENST00000615517 TANGO2Q6ICL3 276 aa7.78□□□□□ -1.16
MUC1-227ENST00000615517 TCEAL6Q6IPX3 200 aa7.78□□□□□ -1.16
MUC1-227ENST00000615517 CEP68Q76N32 757 aa7.78□□□□□ -1.16
MUC1-227ENST00000615517 PDZD3Q86UT5 571 aa7.78□□□□□ -1.16
MUC1-227ENST00000615517 COLGALT2Q8IYK4 626 aa7.78□□□□□ -1.16
MUC1-227ENST00000615517 ADAM32Q8TC27 787 aa7.78□□□□□ -1.16
MUC1-227ENST00000615517 ING5Q8WYH8 240 aa7.78□□□□□ -1.16
MUC1-227ENST00000615517 TCEAL3Q969E4 200 aa7.78□□□□□ -1.16
MUC1-227ENST00000615517 KIF12Q96FN5 646 aa7.78□□□□□ -1.16
MUC1-227ENST00000615517 MAP7D2Q96T17 732 aa7.78□□□□□ -1.16
MUC1-227ENST00000615517 KRT23Q9C075 422 aa7.78□□□□□ -1.16
MUC1-227ENST00000615517 LY9Q9HBG7 655 aa7.78□□□□□ -1.16
MUC1-227ENST00000615517 HCFC1R1Q9NWW0 138 aa7.78□□□□□ -1.16
MUC1-227ENST00000615517 GPSM3Q9Y4H4 160 aa7.78□□□□□ -1.16
MUC1-227ENST00000615517 TRIP11Q15643 1979 aa7.78□□□□□ -1.16
MUC1-227ENST00000615517 URB1O60287 2271 aaKnown RBP7.78□□□□□ -1.16
MUC1-227ENST00000615517 CFAP46Q8IYW2 2715 aa7.78□□□□□ -1.16
MUC1-227ENST00000615517 ADAMTS9Q9P2N4 1935 aa7.78□□□□□ -1.16
MUC1-227ENST00000615517 HECTD1Q9ULT8 2610 aa7.77□□□□□ -1.17
MUC1-227ENST00000615517 MEIS1O00470 390 aa7.77□□□□□ -1.17
MUC1-227ENST00000615517 MAN2B1O00754 1011 aa7.77□□□□□ -1.17
MUC1-227ENST00000615517 CCL16O15467 120 aa7.77□□□□□ -1.17
MUC1-227ENST00000615517 MAGEB2O15479 319 aa7.77□□□□□ -1.17
MUC1-227ENST00000615517 PAPSS2O95340 614 aaPredicted RBP7.77□□□□□ -1.17
MUC1-227ENST00000615517 FCARP24071 287 aa7.77□□□□□ -1.17
MUC1-227ENST00000615517 SH3PXD2AQ5TCZ1 1133 aa7.77□□□□□ -1.17
MUC1-227ENST00000615517 C20orf194Q5TEA3 1177 aa7.77□□□□□ -1.17
MUC1-227ENST00000615517 KIAA1211LQ6NV74 962 aa7.77□□□□□ -1.17
MUC1-227ENST00000615517 MIS18BP1Q6P0N0 1132 aa7.77□□□□□ -1.17
MUC1-227ENST00000615517 MRPL10Q7Z7H8 261 aaKnown RBP7.77□□□□□ -1.17
MUC1-227ENST00000615517 CKAP2LQ8IYA6 745 aa7.77□□□□□ -1.17
MUC1-227ENST00000615517 SPEM1Q8N4L4 309 aa7.77□□□□□ -1.17
MUC1-227ENST00000615517 NLRP7Q8WX94 980 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms