RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 ZHX2Q9Y6X8 837 aa11.73□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 ACTN1P12814 892 aa11.73□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 EZRP15311 586 aaKnown RBP11.73□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 GTF2H1P32780 548 aa11.73□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 COPB2P35606 906 aa11.73□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 ALKBH5Q6P6C2 394 aaKnown RBP11.73□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 TPCN2Q8NHX9 752 aa11.73□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 KCNV2Q8TDN2 545 aa11.73□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 SEC14L1Q92503 715 aa11.73□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 SPAG5Q96R06 1193 aa11.73□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 ZNF341Q9BYN7 854 aa11.73□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 ZNF219Q9P2Y4 722 aaPredicted RBP11.73□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 ZNF233A6NK53 670 aa11.72□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 KCNK3O14649 394 aa11.72□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 TAL1P17542 331 aaPredicted RBP11.72□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 PPATQ06203 517 aa11.72□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 DHX9Q08211 1270 aaKnown RBP11.72□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 BIRC2Q13490 618 aa11.72□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 QPCTQ16769 361 aa11.72□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 ACCSLQ4AC99 568 aa11.72□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 EPC2Q52LR7 807 aa11.72□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 ODR4Q5SWX8 454 aa11.72□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 CD302Q8IX05 232 aa11.72□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 USP38Q8NB14 1042 aa11.72□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 HES6Q96HZ4 224 aa11.72□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 KCNG1Q9UIX4 513 aa11.72□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 COQ4Q9Y3A0 265 aa11.72□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 LCTP09848 1927 aa11.72□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 DICER1Q9UPY3 1922 aaKnown RBP11.72□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 FZD9O00144 591 aa11.72□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 DDX3XO00571 662 aaKnown RBP eCLIP11.72□□□□□ -0.531e-8■■■■□ 23.1
SENP3-EIF4A1-201ENST00000614237 MTA2O94776 668 aa11.72□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 PSMC5P62195 406 aa11.72□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 SNCBQ16143 134 aa11.72□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 KRT71Q3SY84 523 aa11.72□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 NOL9Q5SY16 702 aaKnown RBP11.72□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 CDAN1Q8IWY9 1227 aa11.72□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 MYCBPAPQ8TBZ2 947 aa11.72□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 FBXL18Q96ME1 805 aa11.72□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.72□□□□□ -0.536e-9■■■■■ 163.7
SENP3-EIF4A1-201ENST00000614237 PDLIM7Q9NR12 457 aa11.72□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 PXMP2Q9NR77 195 aa11.72□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 FBXO28Q9NVF7 368 aa11.72□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 AJAP1Q9UKB5 411 aaPredicted RBP11.72□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 PPP2R3BQ9Y5P8 575 aa11.72□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 CHUKO15111 745 aa11.72□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 DKC1O60832 514 aaKnown RBP eCLIP11.72□□□□□ -0.531e-323■■■■■ 31.9
SENP3-EIF4A1-201ENST00000614237 SEPT11Q9NVA2 429 aaKnown RBP11.72□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 SSC5DA1L4H1 1573 aa11.72□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 ASTN2O75129 1339 aaPredicted RBP11.71□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 DCDC2CA8MYV0 355 aa11.71□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 CCDC188H7C350 402 aa11.71□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 LGR5O75473 907 aa11.71□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 ZC2HC1CQ53FD0 456 aaPredicted RBP11.71□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 TRIM68Q6AZZ1 485 aa11.71□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 ILDR2Q71H61 639 aa11.71□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 IFT20Q8IY31 132 aa11.71□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 INTS2Q9H0H0 1204 aaKnown RBP11.71□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 DDX47Q9H0S4 455 aaKnown RBP11.71□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 C19orf81C9J6K1 198 aa11.71□□□□□ -0.54
SENP3-EIF4A1-201ENST00000614237 NFIBO00712 420 aa11.71□□□□□ -0.54
SENP3-EIF4A1-201ENST00000614237 ZBED4O75132 1171 aa11.71□□□□□ -0.54
SENP3-EIF4A1-201ENST00000614237 STBD1O95210 358 aa11.71□□□□□ -0.54
SENP3-EIF4A1-201ENST00000614237 VIMP08670 466 aaKnown RBP11.71□□□□□ -0.54
SENP3-EIF4A1-201ENST00000614237 H2AFZP0C0S5 128 aa11.71□□□□□ -0.54
SENP3-EIF4A1-201ENST00000614237 MTMR1Q13613 665 aa11.71□□□□□ -0.54
SENP3-EIF4A1-201ENST00000614237 SPDYCQ5MJ68 293 aa11.71□□□□□ -0.54
SENP3-EIF4A1-201ENST00000614237 H2AFVQ71UI9 128 aa11.71□□□□□ -0.54
SENP3-EIF4A1-201ENST00000614237 VSIG10LQ86VR7 867 aa11.71□□□□□ -0.54
SENP3-EIF4A1-201ENST00000614237 MORC4Q8TE76 937 aa11.71□□□□□ -0.54
SENP3-EIF4A1-201ENST00000614237 TAF4BQ92750 862 aa11.71□□□□□ -0.54
SENP3-EIF4A1-201ENST00000614237 PDCD2LQ9BRP1 358 aa11.71□□□□□ -0.54
SENP3-EIF4A1-201ENST00000614237 TAOK3Q9H2K8 898 aa11.71□□□□□ -0.54
SENP3-EIF4A1-201ENST00000614237 DONSONQ9NYP3 566 aa11.71□□□□□ -0.54
SENP3-EIF4A1-201ENST00000614237 A6NNZ2 444 aa11.7□□□□□ -0.54
SENP3-EIF4A1-201ENST00000614237 WDR64B1ANS9 1081 aa11.7□□□□□ -0.54
SENP3-EIF4A1-201ENST00000614237 CLGNO14967 610 aa11.7□□□□□ -0.54
SENP3-EIF4A1-201ENST00000614237 ZBTB39O15060 712 aa11.7□□□□□ -0.54
SENP3-EIF4A1-201ENST00000614237 BAG6P46379 1132 aa11.7□□□□□ -0.54
SENP3-EIF4A1-201ENST00000614237 PPP2R5EQ16537 467 aa11.7□□□□□ -0.54
SENP3-EIF4A1-201ENST00000614237 TUBB8Q3ZCM7 444 aa11.7□□□□□ -0.54
SENP3-EIF4A1-201ENST00000614237 C1orf220Q5T0J3 134 aa11.7□□□□□ -0.54
SENP3-EIF4A1-201ENST00000614237 DCAF15Q66K64 600 aa11.7□□□□□ -0.54
SENP3-EIF4A1-201ENST00000614237 LNX1Q8TBB1 728 aaPredicted RBP11.7□□□□□ -0.54
SENP3-EIF4A1-201ENST00000614237 ISCUQ9H1K1 167 aa11.7□□□□□ -0.54
SENP3-EIF4A1-201ENST00000614237 BCAS3Q9H6U6 928 aa11.7□□□□□ -0.54
SENP3-EIF4A1-201ENST00000614237 AS3MTQ9HBK9 375 aa11.7□□□□□ -0.54
SENP3-EIF4A1-201ENST00000614237 VWA5AO00534 786 aa11.7□□□□□ -0.54
SENP3-EIF4A1-201ENST00000614237 CLIC2O15247 247 aa11.7□□□□□ -0.54
SENP3-EIF4A1-201ENST00000614237 EVI5O60447 810 aa11.7□□□□□ -0.54
SENP3-EIF4A1-201ENST00000614237 SHOX2O60902 331 aaPredicted RBP11.7□□□□□ -0.54
SENP3-EIF4A1-201ENST00000614237 VCAM1P19320 739 aa11.7□□□□□ -0.54
SENP3-EIF4A1-201ENST00000614237 YWHABP31946 246 aaKnown RBP11.7□□□□□ -0.54
SENP3-EIF4A1-201ENST00000614237 PTGISQ16647 500 aa11.7□□□□□ -0.54
SENP3-EIF4A1-201ENST00000614237 CBWD6Q4V339 395 aa11.7□□□□□ -0.54
SENP3-EIF4A1-201ENST00000614237 CCDC38Q502W7 563 aa11.7□□□□□ -0.54
SENP3-EIF4A1-201ENST00000614237 CBWD3Q5JTY5 395 aa11.7□□□□□ -0.54
SENP3-EIF4A1-201ENST00000614237 CBWD5Q5RIA9 395 aa11.7□□□□□ -0.54
SENP3-EIF4A1-201ENST00000614237 MIGA2Q7L4E1 593 aa11.7□□□□□ -0.54
SENP3-EIF4A1-201ENST00000614237 SCYL3Q8IZE3 742 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms