RNA–Protein interactions for RNA: ENST00000612683.1

FDPS-221, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene FDPS, Length 1,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-221ENST00000612683 VN1R3Q9BXE9 311 aa16.41■□□□□ 0.22
FDPS-221ENST00000612683 CSRNP2Q9H175 543 aa16.41■□□□□ 0.22
FDPS-221ENST00000612683 RNF39Q9H2S5 420 aa16.41■□□□□ 0.22
FDPS-221ENST00000612683 STK39Q9UEW8 545 aa16.41■□□□□ 0.22
FDPS-221ENST00000612683 DBR1Q9UK59 544 aaKnown RBP16.41■□□□□ 0.22
FDPS-221ENST00000612683 HES2Q9Y543 173 aa16.41■□□□□ 0.22
FDPS-221ENST00000612683 IPPQ9Y573 584 aa16.41■□□□□ 0.22
FDPS-221ENST00000612683 XRCC6P12956 609 aaKnown RBP eCLIP16.4■□□□□ 0.22
FDPS-221ENST00000612683 ARL2P36404 184 aa16.4■□□□□ 0.22
FDPS-221ENST00000612683 RARRES1P49788 294 aa16.4■□□□□ 0.22
FDPS-221ENST00000612683 GUCY1B3Q02153 619 aa16.4■□□□□ 0.22
FDPS-221ENST00000612683 TMC5Q6UXY8 1006 aa16.4■□□□□ 0.22
FDPS-221ENST00000612683 MAEAQ7L5Y9 396 aa16.4■□□□□ 0.22
FDPS-221ENST00000612683 IFNLR1Q8IU57 520 aaPredicted RBP16.4■□□□□ 0.22
FDPS-221ENST00000612683 KREMEN2Q8NCW0 462 aa16.4■□□□□ 0.22
FDPS-221ENST00000612683 CCDC51Q96ER9 411 aa16.4■□□□□ 0.22
FDPS-221ENST00000612683 ASIC4Q96FT7 647 aa16.4■□□□□ 0.22
FDPS-221ENST00000612683 MTMR9Q96QG7 549 aa16.4■□□□□ 0.22
FDPS-221ENST00000612683 GAD1Q99259 594 aa16.4■□□□□ 0.22
FDPS-221ENST00000612683 TRIM6Q9C030 488 aaPredicted RBP16.4■□□□□ 0.22
FDPS-221ENST00000612683 MRPL17Q9NRX2 175 aaKnown RBP16.4■□□□□ 0.22
FDPS-221ENST00000612683 MIOSQ9NXC5 875 aa16.4■□□□□ 0.22
FDPS-221ENST00000612683 PRG3Q9Y2Y8 225 aaPredicted RBP16.4■□□□□ 0.22
FDPS-221ENST00000612683 TRIOO75962 3097 aa16.4■□□□□ 0.22
FDPS-221ENST00000612683 ZNF318Q5VUA4 2279 aa16.4■□□□□ 0.22
FDPS-221ENST00000612683 ARL5CA6NH57 179 aa16.39■□□□□ 0.21
FDPS-221ENST00000612683 C2CD2LO14523 706 aa16.39■□□□□ 0.21
FDPS-221ENST00000612683 CNPP09543 421 aaKnown RBP16.39■□□□□ 0.21
FDPS-221ENST00000612683 ARF4P18085 180 aaPredicted RBP16.39■□□□□ 0.21
FDPS-221ENST00000612683 GLRA2P23416 452 aa16.39■□□□□ 0.21
FDPS-221ENST00000612683 MCM7P33993 719 aa16.39■□□□□ 0.21
FDPS-221ENST00000612683 MRE11P49959 708 aa16.39■□□□□ 0.21
FDPS-221ENST00000612683 MBTD1Q05BQ5 628 aa16.39■□□□□ 0.21
FDPS-221ENST00000612683 CAPSQ13938 189 aa16.39■□□□□ 0.21
FDPS-221ENST00000612683 SAFBQ15424 915 aaKnown RBP eCLIP16.39■□□□□ 0.21
FDPS-221ENST00000612683 KIAA1841Q6NSI8 718 aa16.39■□□□□ 0.21
FDPS-221ENST00000612683 COLGALT2Q8IYK4 626 aa16.39■□□□□ 0.21
FDPS-221ENST00000612683 POLR3FQ9H1D9 316 aaPredicted RBP16.39■□□□□ 0.21
FDPS-221ENST00000612683 TMEM60Q9H2L4 133 aa16.39■□□□□ 0.21
FDPS-221ENST00000612683 LIMD1Q9UGP4 676 aa16.39■□□□□ 0.21
FDPS-221ENST00000612683 POTEMA6NI47 508 aa16.38■□□□□ 0.21
FDPS-221ENST00000612683 USO1O60763 962 aaKnown RBP16.38■□□□□ 0.21
FDPS-221ENST00000612683 LILRB3O75022 631 aa16.38■□□□□ 0.21
FDPS-221ENST00000612683 NR1I2O75469 434 aa16.38■□□□□ 0.21
FDPS-221ENST00000612683 SEC24BO95487 1268 aa16.38■□□□□ 0.21
FDPS-221ENST00000612683 SOD2P04179 222 aa16.38■□□□□ 0.21
FDPS-221ENST00000612683 MLH1P40692 756 aa16.38■□□□□ 0.21
FDPS-221ENST00000612683 CLCN4P51793 760 aa16.38■□□□□ 0.21
FDPS-221ENST00000612683 ERICH6BQ5W0A0 696 aa16.38■□□□□ 0.21
FDPS-221ENST00000612683 TAS1R1Q7RTX1 841 aa16.38■□□□□ 0.21
FDPS-221ENST00000612683 HACE1Q8IYU2 909 aa16.38■□□□□ 0.21
FDPS-221ENST00000612683 PLCD3Q8N3E9 789 aa16.38■□□□□ 0.21
FDPS-221ENST00000612683 TDRD5Q8NAT2 981 aaKnown RBP16.38■□□□□ 0.21
FDPS-221ENST00000612683 PRSS33Q8NF86 280 aa16.38■□□□□ 0.21
FDPS-221ENST00000612683 ZFP42Q96MM3 310 aa16.38■□□□□ 0.21
FDPS-221ENST00000612683 PRRX2Q99811 253 aa16.38■□□□□ 0.21
FDPS-221ENST00000612683 SORCS3Q9UPU3 1222 aa16.38■□□□□ 0.21
FDPS-221ENST00000612683 SSX2IPQ9Y2D8 614 aa16.38■□□□□ 0.21
FDPS-221ENST00000612683 GIT1Q9Y2X7 761 aa16.38■□□□□ 0.21
FDPS-221ENST00000612683 ARID2Q68CP9 1835 aa16.38■□□□□ 0.21
FDPS-221ENST00000612683 LRRIQ4A6NIV6 560 aa16.37■□□□□ 0.21
FDPS-221ENST00000612683 B4GALT5O43286 388 aa16.37■□□□□ 0.21
FDPS-221ENST00000612683 URODP06132 367 aa16.37■□□□□ 0.21
FDPS-221ENST00000612683 SPATA31C1P0DKV0 1188 aa16.37■□□□□ 0.21
FDPS-221ENST00000612683 AVPR2P30518 371 aa16.37■□□□□ 0.21
FDPS-221ENST00000612683 SCNN1GP51170 649 aa16.37■□□□□ 0.21
FDPS-221ENST00000612683 MTMR3Q13615 1198 aa16.37■□□□□ 0.21
FDPS-221ENST00000612683 ZNF174Q15697 407 aa16.37■□□□□ 0.21
FDPS-221ENST00000612683 AMHR2Q16671 573 aa16.37■□□□□ 0.21
FDPS-221ENST00000612683 GPR149Q86SP6 731 aa16.37■□□□□ 0.21
FDPS-221ENST00000612683 CDR2LQ86X02 465 aaPredicted RBP16.37■□□□□ 0.21
FDPS-221ENST00000612683 CATSPER3Q86XQ3 398 aa16.37■□□□□ 0.21
FDPS-221ENST00000612683 UBALD2Q8IYN6 164 aa16.37■□□□□ 0.21
FDPS-221ENST00000612683 ZDHHC14Q8IZN3 488 aa16.37■□□□□ 0.21
FDPS-221ENST00000612683 FEZF2Q8TBJ5 459 aa16.37■□□□□ 0.21
FDPS-221ENST00000612683 COLEC11Q9BWP8 271 aa16.37■□□□□ 0.21
FDPS-221ENST00000612683 NFKBIZQ9BYH8 718 aa16.37■□□□□ 0.21
FDPS-221ENST00000612683 SFXN1Q9H9B4 322 aa16.37■□□□□ 0.21
FDPS-221ENST00000612683 TUFT1Q9NNX1 390 aa16.37■□□□□ 0.21
FDPS-221ENST00000612683 GPRC5CQ9NQ84 441 aa16.37■□□□□ 0.21
FDPS-221ENST00000612683 MARCH5Q9NX47 278 aa16.37■□□□□ 0.21
FDPS-221ENST00000612683 PARP2Q9UGN5 583 aa16.37■□□□□ 0.21
FDPS-221ENST00000612683 LIMCH1Q9UPQ0 1083 aa16.37■□□□□ 0.21
FDPS-221ENST00000612683 INPPL1O15357 1258 aa16.36■□□□□ 0.21
FDPS-221ENST00000612683 NPTXRO95502 500 aa16.36■□□□□ 0.21
FDPS-221ENST00000612683 BRD1O95696 1058 aa16.36■□□□□ 0.21
FDPS-221ENST00000612683 PDGFBP01127 241 aaPredicted RBP16.36■□□□□ 0.21
FDPS-221ENST00000612683 ASGR2P07307 311 aa16.36■□□□□ 0.21
FDPS-221ENST00000612683 AKAP5P24588 427 aa16.36■□□□□ 0.21
FDPS-221ENST00000612683 PTPN5P54829 565 aa16.36■□□□□ 0.21
FDPS-221ENST00000612683 VCPP55072 806 aaKnown RBP16.36■□□□□ 0.21
FDPS-221ENST00000612683 DSC1Q08554 894 aa16.36■□□□□ 0.21
FDPS-221ENST00000612683 ST3GAL1Q11201 340 aa16.36■□□□□ 0.21
FDPS-221ENST00000612683 SLC27A1Q6PCB7 646 aa16.36■□□□□ 0.21
FDPS-221ENST00000612683 CCDC83Q8IWF9 413 aa16.36■□□□□ 0.21
FDPS-221ENST00000612683 C8orf76Q96K31 380 aa16.36■□□□□ 0.21
FDPS-221ENST00000612683 NACC1Q96RE7 527 aa16.36■□□□□ 0.21
FDPS-221ENST00000612683 RPS6KC1Q96S38 1066 aa16.36■□□□□ 0.21
FDPS-221ENST00000612683 HERC2P3Q9BVR0 1158 aa16.36■□□□□ 0.21
FDPS-221ENST00000612683 NXF3Q9H4D5 531 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms