RNA–Protein interactions for RNA: ENST00000612455.1

CCND3-222, Transcript of cyclin D3, human

Gene CCND3, Length 536 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCND3-222	ENST00000612455	FSCN2	O14926	492 aa		18.42	■□□□□ 0.54
CCND3-222	ENST00000612455	N4BP3	O15049	544 aa		18.42	■□□□□ 0.54
CCND3-222	ENST00000612455	NCK2	O43639	380 aa		18.42	■□□□□ 0.54
CCND3-222	ENST00000612455	DDHD2	O94830	711 aa		18.42	■□□□□ 0.54
CCND3-222	ENST00000612455	PLCG1	P19174	1290 aa		18.42	■□□□□ 0.54
CCND3-222	ENST00000612455	IRS1	P35568	1242 aa		18.42	■□□□□ 0.54
CCND3-222	ENST00000612455	DDIT3	P35638	169 aa		18.42	■□□□□ 0.54
CCND3-222	ENST00000612455	BCAR1	P56945	870 aa		18.42	■□□□□ 0.54
CCND3-222	ENST00000612455	PRPF4B	Q13523	1007 aa	Known RBP	18.42	■□□□□ 0.54
CCND3-222	ENST00000612455	TJAP1	Q5JTD0	557 aa		18.42	■□□□□ 0.54
CCND3-222	ENST00000612455	NT5DC1	Q5TFE4	455 aa		18.42	■□□□□ 0.54
CCND3-222	ENST00000612455	PDE12	Q6L8Q7	609 aa	Known RBP	18.42	■□□□□ 0.54
CCND3-222	ENST00000612455	TAS1R3	Q7RTX0	852 aa		18.42	■□□□□ 0.54
CCND3-222	ENST00000612455	ZNF280B	Q86YH2	543 aa		18.42	■□□□□ 0.54
CCND3-222	ENST00000612455	RAD54L	Q92698	747 aa		18.42	■□□□□ 0.54
CCND3-222	ENST00000612455	KCNN1	Q92952	543 aa		18.42	■□□□□ 0.54
CCND3-222	ENST00000612455	ZNF396	Q96N95	335 aa	Predicted RBP	18.42	■□□□□ 0.54
CCND3-222	ENST00000612455	KIFC3	Q9BVG8	833 aa		18.42	■□□□□ 0.54
CCND3-222	ENST00000612455	PDZD7	Q9H5P4	517 aa		18.42	■□□□□ 0.54
CCND3-222	ENST00000612455	MIOS	Q9NXC5	875 aa		18.42	■□□□□ 0.54
CCND3-222	ENST00000612455	HES2	Q9Y543	173 aa		18.42	■□□□□ 0.54
CCND3-222	ENST00000612455	ZMYM2	Q9UBW7	1377 aa		18.42	■□□□□ 0.54
CCND3-222	ENST00000612455	XIRP2	A4UGR9	3374 aa		18.41	■□□□□ 0.54
CCND3-222	ENST00000612455	CCDC169	A6NNP5	214 aa		18.41	■□□□□ 0.54
CCND3-222	ENST00000612455	B4GALT3	O60512	393 aa		18.41	■□□□□ 0.54
CCND3-222	ENST00000612455	NPTXR	O95502	500 aa		18.41	■□□□□ 0.54
CCND3-222	ENST00000612455	F13A1	P00488	732 aa		18.41	■□□□□ 0.54
CCND3-222	ENST00000612455	SSB	P05455	408 aa	Known RBP eCLIP	18.41	■□□□□ 0.54
CCND3-222	ENST00000612455	GALT	P07902	379 aa		18.41	■□□□□ 0.54
CCND3-222	ENST00000612455	PLS3	P13797	630 aa		18.41	■□□□□ 0.54
CCND3-222	ENST00000612455	PBX3	P40426	434 aa		18.41	■□□□□ 0.54
CCND3-222	ENST00000612455	ALDH7A1	P49419	539 aa	Known RBP	18.41	■□□□□ 0.54
CCND3-222	ENST00000612455	ERVFC1	P60507	584 aa		18.41	■□□□□ 0.54
CCND3-222	ENST00000612455	TFF2	Q03403	129 aa		18.41	■□□□□ 0.54
CCND3-222	ENST00000612455	HYAL1	Q12794	435 aa		18.41	■□□□□ 0.54
CCND3-222	ENST00000612455	MCM6	Q14566	821 aa		18.41	■□□□□ 0.54
CCND3-222	ENST00000612455	CTC1	Q2NKJ3	1217 aa		18.41	■□□□□ 0.54
CCND3-222	ENST00000612455	SPECC1	Q5M775	1068 aa		18.41	■□□□□ 0.54
CCND3-222	ENST00000612455	KRI1	Q8N9T8	703 aa	Known RBP	18.41	■□□□□ 0.54
CCND3-222	ENST00000612455	GSTCD	Q8NEC7	633 aa		18.41	■□□□□ 0.54
CCND3-222	ENST00000612455	URGCP	Q8TCY9	931 aa		18.41	■□□□□ 0.54
CCND3-222	ENST00000612455	SYMPK	Q92797	1274 aa	Known RBP	18.41	■□□□□ 0.54
CCND3-222	ENST00000612455	NXF3	Q9H4D5	531 aa	Known RBP	18.41	■□□□□ 0.54
CCND3-222	ENST00000612455	KMT5A	Q9NQR1	393 aa		18.41	■□□□□ 0.54
CCND3-222	ENST00000612455	TFIP11	Q9UBB9	837 aa	Known RBP	18.41	■□□□□ 0.54
CCND3-222	ENST00000612455	PUF60	Q9UHX1	559 aa	Known RBP	18.41	■□□□□ 0.54
CCND3-222	ENST00000612455	INPP5F	Q9Y2H2	1132 aa		18.41	■□□□□ 0.54
CCND3-222	ENST00000612455	USP20	Q9Y2K6	914 aa		18.41	■□□□□ 0.54
CCND3-222	ENST00000612455	NPHP3-ACAD11	A0A0J9YXS1	232 aa		18.4	■□□□□ 0.54
CCND3-222	ENST00000612455	ARL5C	A6NH57	179 aa		18.4	■□□□□ 0.54
CCND3-222	ENST00000612455	PPP6R2	O75170	966 aa		18.4	■□□□□ 0.54
CCND3-222	ENST00000612455	BMP1	P13497	986 aa		18.4	■□□□□ 0.54
CCND3-222	ENST00000612455	KRT17	Q04695	432 aa		18.4	■□□□□ 0.54
CCND3-222	ENST00000612455	DMP1	Q13316	513 aa	Predicted RBP	18.4	■□□□□ 0.54
CCND3-222	ENST00000612455	PKP1	Q13835	747 aa		18.4	■□□□□ 0.54
CCND3-222	ENST00000612455	GIT2	Q14161	759 aa		18.4	■□□□□ 0.54
CCND3-222	ENST00000612455	AAK1	Q2M2I8	961 aa		18.4	■□□□□ 0.54
CCND3-222	ENST00000612455	EEF1DP3	Q658K8	133 aa		18.4	■□□□□ 0.54
CCND3-222	ENST00000612455	HACE1	Q8IYU2	909 aa		18.4	■□□□□ 0.54
CCND3-222	ENST00000612455	SPRYD3	Q8NCJ5	442 aa		18.4	■□□□□ 0.54
CCND3-222	ENST00000612455	PABPC5	Q96DU9	382 aa	Known RBP	18.4	■□□□□ 0.54
CCND3-222	ENST00000612455	GAD1	Q99259	594 aa		18.4	■□□□□ 0.54
CCND3-222	ENST00000612455	TMEM175	Q9BSA9	504 aa		18.4	■□□□□ 0.54
CCND3-222	ENST00000612455	TRIM6	Q9C030	488 aa	Predicted RBP	18.4	■□□□□ 0.54
CCND3-222	ENST00000612455	UBE2Z	Q9H832	354 aa	Predicted RBP	18.4	■□□□□ 0.54
CCND3-222	ENST00000612455	PTPRH	Q9HD43	1115 aa		18.4	■□□□□ 0.54
CCND3-222	ENST00000612455	TLR9	Q9NR96	1032 aa		18.4	■□□□□ 0.54
CCND3-222	ENST00000612455	DNAJB4	Q9UDY4	337 aa		18.4	■□□□□ 0.54
CCND3-222	ENST00000612455	ODF2L	Q9ULJ1	636 aa		18.4	■□□□□ 0.54
CCND3-222	ENST00000612455	TNFSF13B	Q9Y275	285 aa		18.4	■□□□□ 0.54
CCND3-222	ENST00000612455	TDRD15	B5MCY1	1934 aa	Known RBP	18.4	■□□□□ 0.54
CCND3-222	ENST00000612455	PHLPP2	Q6ZVD8	1323 aa		18.4	■□□□□ 0.54
CCND3-222	ENST00000612455	NT5C1B-RDH14	C9J2C7	533 aa		18.39	■□□□□ 0.53
CCND3-222	ENST00000612455	SPTLC2	O15270	562 aa		18.39	■□□□□ 0.53
CCND3-222	ENST00000612455	YEATS4	O95619	227 aa		18.39	■□□□□ 0.53
CCND3-222	ENST00000612455	SLC11A1	P49279	550 aa		18.39	■□□□□ 0.53
CCND3-222	ENST00000612455	ZNF131	P52739	623 aa		18.39	■□□□□ 0.53
CCND3-222	ENST00000612455	RNASEL	Q05823	741 aa	Known RBP	18.39	■□□□□ 0.53
CCND3-222	ENST00000612455	DSC1	Q08554	894 aa		18.39	■□□□□ 0.53
CCND3-222	ENST00000612455	RAD51AP2	Q09MP3	1159 aa		18.39	■□□□□ 0.53
CCND3-222	ENST00000612455	ADAM15	Q13444	863 aa		18.39	■□□□□ 0.53
CCND3-222	ENST00000612455	ATL3	Q6DD88	541 aa		18.39	■□□□□ 0.53
CCND3-222	ENST00000612455	ADGRD2	Q7Z7M1	963 aa		18.39	■□□□□ 0.53
CCND3-222	ENST00000612455	GPBP1	Q86WP2	473 aa		18.39	■□□□□ 0.53
CCND3-222	ENST00000612455	TMEM161B	Q8NDZ6	487 aa		18.39	■□□□□ 0.53
CCND3-222	ENST00000612455	LARP4B	Q92615	738 aa	Known RBP	18.39	■□□□□ 0.53
CCND3-222	ENST00000612455	IGSF21	Q96ID5	467 aa		18.39	■□□□□ 0.53
CCND3-222	ENST00000612455	ACO2	Q99798	780 aa	Known RBP	18.39	■□□□□ 0.53
CCND3-222	ENST00000612455	COL25A1	Q9BXS0	654 aa	Predicted RBP	18.39	■□□□□ 0.53
CCND3-222	ENST00000612455	STK17A	Q9UEE5	414 aa		18.39	■□□□□ 0.53
CCND3-222	ENST00000612455	CCDC39	Q9UFE4	941 aa		18.39	■□□□□ 0.53
CCND3-222	ENST00000612455	SLC16A4	O15374	487 aa		18.38	■□□□□ 0.53
CCND3-222	ENST00000612455	ZC3H11A	O75152	810 aa	Known RBP eCLIP	18.38	■□□□□ 0.53
CCND3-222	ENST00000612455	POMC	P01189	267 aa		18.38	■□□□□ 0.53
CCND3-222	ENST00000612455	ALDH2	P05091	517 aa		18.38	■□□□□ 0.53
CCND3-222	ENST00000612455	LIG1	P18858	919 aa		18.38	■□□□□ 0.53
CCND3-222	ENST00000612455	AKAP5	P24588	427 aa		18.38	■□□□□ 0.53
CCND3-222	ENST00000612455	LTBR	P36941	435 aa		18.38	■□□□□ 0.53
CCND3-222	ENST00000612455	SMTN	P53814	917 aa		18.38	■□□□□ 0.53
CCND3-222	ENST00000612455	STK38	Q15208	465 aa		18.38	■□□□□ 0.53

Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms