RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 TMPRSS15P98073 1019 aa11.63□□□□□ -0.55
CDC42EP3-206ENST00000611976 MEA1Q16626 185 aa11.63□□□□□ -0.55
CDC42EP3-206ENST00000611976 ANKRD20A4Q4UJ75 823 aa11.63□□□□□ -0.55
CDC42EP3-206ENST00000611976 ANKRD20A8PQ5CZ79 823 aa11.63□□□□□ -0.55
CDC42EP3-206ENST00000611976 ANKRD20A2Q5SQ80 823 aa11.63□□□□□ -0.55
CDC42EP3-206ENST00000611976 ANKRD20A1Q5TYW2 823 aa11.63□□□□□ -0.55
CDC42EP3-206ENST00000611976 CYFIP1Q7L576 1253 aa11.63□□□□□ -0.55
CDC42EP3-206ENST00000611976 HAUS6Q7Z4H7 955 aa11.63□□□□□ -0.55
CDC42EP3-206ENST00000611976 DEPDC1BQ8WUY9 529 aa11.63□□□□□ -0.55
CDC42EP3-206ENST00000611976 ARHGEF1Q92888 912 aaKnown RBP11.63□□□□□ -0.55
CDC42EP3-206ENST00000611976 RNF25Q96BH1 459 aaPredicted RBP11.63□□□□□ -0.55
CDC42EP3-206ENST00000611976 NXF1Q9UBU9 619 aaKnown RBP11.63□□□□□ -0.55
CDC42EP3-206ENST00000611976 DMGDHQ9UI17 866 aaKnown RBP11.63□□□□□ -0.55
CDC42EP3-206ENST00000611976 TTLL3Q9Y4R7 772 aa11.63□□□□□ -0.55
CDC42EP3-206ENST00000611976 A0A087X0T9 212 aa11.63□□□□□ -0.55
CDC42EP3-206ENST00000611976 H0Y3Z8 333 aa11.63□□□□□ -0.55
CDC42EP3-206ENST00000611976 P4HA2O15460 535 aa11.63□□□□□ -0.55
CDC42EP3-206ENST00000611976 FAM228BP0C875 321 aa11.63□□□□□ -0.55
CDC42EP3-206ENST00000611976 PSMC5P62195 406 aa11.63□□□□□ -0.55
CDC42EP3-206ENST00000611976 GPS1Q13098 491 aa11.63□□□□□ -0.55
CDC42EP3-206ENST00000611976 WDR75Q8IWA0 830 aaKnown RBP11.63□□□□□ -0.55
CDC42EP3-206ENST00000611976 ST13P4Q8IZP2 240 aaPredicted RBP11.63□□□□□ -0.55
CDC42EP3-206ENST00000611976 TTC16Q8NEE8 873 aa11.63□□□□□ -0.55
CDC42EP3-206ENST00000611976 FAF2Q96CS3 445 aa11.63□□□□□ -0.55
CDC42EP3-206ENST00000611976 MASTLQ96GX5 879 aa11.63□□□□□ -0.55
CDC42EP3-206ENST00000611976 FAM213AQ9BRX8 229 aa11.63□□□□□ -0.55
CDC42EP3-206ENST00000611976 CENPKQ9BS16 269 aa11.63□□□□□ -0.55
CDC42EP3-206ENST00000611976 JMJD4Q9H9V9 463 aa11.63□□□□□ -0.55
CDC42EP3-206ENST00000611976 INO80B-WBP1J3KQ70 363 aa11.62□□□□□ -0.55
CDC42EP3-206ENST00000611976 APBA3O96018 575 aa11.62□□□□□ -0.55
CDC42EP3-206ENST00000611976 GNA15P30679 374 aa11.62□□□□□ -0.55
CDC42EP3-206ENST00000611976 ARL4AP40617 200 aa11.62□□□□□ -0.55
CDC42EP3-206ENST00000611976 ARFIP2P53365 341 aa11.62□□□□□ -0.55
CDC42EP3-206ENST00000611976 PRPSAP1Q14558 356 aa11.62□□□□□ -0.55
CDC42EP3-206ENST00000611976 CEP55Q53EZ4 464 aa11.62□□□□□ -0.55
CDC42EP3-206ENST00000611976 GPD1LQ8N335 351 aa11.62□□□□□ -0.55
CDC42EP3-206ENST00000611976 SERPINI1Q99574 410 aa11.62□□□□□ -0.55
CDC42EP3-206ENST00000611976 INO80BQ9C086 356 aaPredicted RBP11.62□□□□□ -0.55
CDC42EP3-206ENST00000611976 RGL1Q9NZL6 768 aa11.62□□□□□ -0.55
CDC42EP3-206ENST00000611976 NYAP2Q9P242 653 aa11.62□□□□□ -0.55
CDC42EP3-206ENST00000611976 MON2Q7Z3U7 1717 aa11.62□□□□□ -0.55
CDC42EP3-206ENST00000611976 CYP26A1O43174 497 aa11.62□□□□□ -0.55
CDC42EP3-206ENST00000611976 SPAG7O75391 227 aa11.62□□□□□ -0.55
CDC42EP3-206ENST00000611976 ELF1P32519 619 aa11.62□□□□□ -0.55
CDC42EP3-206ENST00000611976 ECE1P42892 770 aa11.62□□□□□ -0.55
CDC42EP3-206ENST00000611976 TAP1Q03518 808 aa11.62□□□□□ -0.55
CDC42EP3-206ENST00000611976 MEI1Q5TIA1 1274 aa11.62□□□□□ -0.55
CDC42EP3-206ENST00000611976 OR6B2Q6IFH4 312 aa11.62□□□□□ -0.55
CDC42EP3-206ENST00000611976 COL23A1Q86Y22 540 aaPredicted RBP11.62□□□□□ -0.55
CDC42EP3-206ENST00000611976 ZBED8Q8IZ13 594 aa11.62□□□□□ -0.55
CDC42EP3-206ENST00000611976 PROCA1Q8NCQ7 364 aaPredicted RBP11.62□□□□□ -0.55
CDC42EP3-206ENST00000611976 A0A087X0B3 334 aa11.62□□□□□ -0.55
CDC42EP3-206ENST00000611976 KRT7P08729 469 aa11.62□□□□□ -0.55
CDC42EP3-206ENST00000611976 PDIA2Q13087 525 aaKnown RBP11.62□□□□□ -0.55
CDC42EP3-206ENST00000611976 ZC3H18Q86VM9 953 aaKnown RBP11.62□□□□□ -0.55
CDC42EP3-206ENST00000611976 PASD1Q8IV76 773 aa11.62□□□□□ -0.55
CDC42EP3-206ENST00000611976 AGGF1Q8N302 714 aaeCLIP11.62□□□□□ -0.55
CDC42EP3-206ENST00000611976 AENQ8WTP8 325 aaKnown RBP11.62□□□□□ -0.55
CDC42EP3-206ENST00000611976 CELF4Q9BZC1 486 aaKnown RBP11.62□□□□□ -0.55
CDC42EP3-206ENST00000611976 PPARGC1AQ9UBK2 798 aaKnown RBP11.62□□□□□ -0.55
CDC42EP3-206ENST00000611976 RPS6KA2Q15349 733 aa11.62□□□□□ -0.55
CDC42EP3-206ENST00000611976 ZBTB33Q86T24 672 aa11.62□□□□□ -0.55
CDC42EP3-206ENST00000611976 HACE1Q8IYU2 909 aa11.62□□□□□ -0.55
CDC42EP3-206ENST00000611976 MED10Q9BTT4 135 aa11.62□□□□□ -0.55
CDC42EP3-206ENST00000611976 CXorf56Q9H5V9 222 aa11.62□□□□□ -0.55
CDC42EP3-206ENST00000611976 PARVAQ9NVD7 372 aa11.62□□□□□ -0.55
CDC42EP3-206ENST00000611976 INTS13Q9NVM9 706 aa11.62□□□□□ -0.55
CDC42EP3-206ENST00000611976 TTC7AQ9ULT0 858 aaPredicted RBP11.62□□□□□ -0.55
CDC42EP3-206ENST00000611976 A0A0A6YYK5 440 aaPredicted RBP11.61□□□□□ -0.55
CDC42EP3-206ENST00000611976 SLC37A4O43826 429 aa11.61□□□□□ -0.55
CDC42EP3-206ENST00000611976 SCP2P22307 547 aa11.61□□□□□ -0.55
CDC42EP3-206ENST00000611976 CCND1P24385 295 aa11.61□□□□□ -0.55
CDC42EP3-206ENST00000611976 MMEL1Q495T6 779 aa11.61□□□□□ -0.55
CDC42EP3-206ENST00000611976 PABPC3Q9H361 631 aaKnown RBP11.61□□□□□ -0.55
CDC42EP3-206ENST00000611976 VCPKMTQ9H867 229 aa11.61□□□□□ -0.55
CDC42EP3-206ENST00000611976 HSPBP1Q9NZL4 362 aa11.61□□□□□ -0.55
CDC42EP3-206ENST00000611976 FAM205AQ6ZU69 1335 aa11.61□□□□□ -0.55
CDC42EP3-206ENST00000611976 FAM196BA6NMK8 535 aa11.61□□□□□ -0.55
CDC42EP3-206ENST00000611976 CES2O00748 559 aa11.61□□□□□ -0.55
CDC42EP3-206ENST00000611976 SRGAP2BP0DMP2 458 aa11.61□□□□□ -0.55
CDC42EP3-206ENST00000611976 PMS1P54277 932 aaKnown RBP11.61□□□□□ -0.55
CDC42EP3-206ENST00000611976 RAD23BP54727 409 aa11.61□□□□□ -0.55
CDC42EP3-206ENST00000611976 POLE2P56282 527 aa11.61□□□□□ -0.55
CDC42EP3-206ENST00000611976 SNRPFP62306 86 aaKnown RBP11.61□□□□□ -0.55
CDC42EP3-206ENST00000611976 RC3H1Q5TC82 1133 aaKnown RBP11.61□□□□□ -0.55
CDC42EP3-206ENST00000611976 NUDCD1Q96RS6 583 aa11.61□□□□□ -0.55
CDC42EP3-206ENST00000611976 CYP26B1Q9NR63 512 aa11.61□□□□□ -0.55
CDC42EP3-206ENST00000611976 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.61□□□□□ -0.55
CDC42EP3-206ENST00000611976 ALG6Q9Y672 507 aa11.61□□□□□ -0.55
CDC42EP3-206ENST00000611976 GPR75-ASB3A0A0A6YYF3 556 aa11.61□□□□□ -0.55
CDC42EP3-206ENST00000611976 EZH2Q15910 746 aaKnown RBP11.61□□□□□ -0.55
CDC42EP3-206ENST00000611976 LONRF1Q17RB8 773 aa11.61□□□□□ -0.55
CDC42EP3-206ENST00000611976 CAPRIN2Q6IMN6 1127 aaKnown RBP11.61□□□□□ -0.55
CDC42EP3-206ENST00000611976 BZW1Q7L1Q6 419 aaKnown RBP11.61□□□□□ -0.55
CDC42EP3-206ENST00000611976 SP8Q8IXZ3 490 aa11.61□□□□□ -0.55
CDC42EP3-206ENST00000611976 RIBC1Q8N443 379 aaPredicted RBP11.61□□□□□ -0.55
CDC42EP3-206ENST00000611976 HSPH1Q92598 858 aa11.61□□□□□ -0.55
CDC42EP3-206ENST00000611976 TRABDQ9H4I3 376 aa11.61□□□□□ -0.55
CDC42EP3-206ENST00000611976 ASNSD1Q9NWL6 643 aa11.61□□□□□ -0.55
CDC42EP3-206ENST00000611976 CSADQ9Y600 493 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms