RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 CCDC34Q96HJ3 373 aa9.71□□□□□ -0.86
SMAD4-217ENST00000611848 ADAM2Q99965 735 aa9.71□□□□□ -0.86
SMAD4-217ENST00000611848 PBX4Q9BYU1 374 aa9.71□□□□□ -0.86
SMAD4-217ENST00000611848 XPO4Q9C0E2 1151 aaKnown RBP9.71□□□□□ -0.86
SMAD4-217ENST00000611848 CUEDC2Q9H467 287 aa9.71□□□□□ -0.86
SMAD4-217ENST00000611848 IFNKQ9P0W0 207 aa9.71□□□□□ -0.86
SMAD4-217ENST00000611848 DACH1Q9UI36 760 aa9.71□□□□□ -0.86
SMAD4-217ENST00000611848 ODF2LQ9ULJ1 636 aa9.71□□□□□ -0.86
SMAD4-217ENST00000611848 PCDHA11Q9Y5I1 949 aa9.71□□□□□ -0.86
SMAD4-217ENST00000611848 TMEM265A0A087WTH1 108 aa9.7□□□□□ -0.86
SMAD4-217ENST00000611848 INO80B-WBP1J3KQ70 363 aa9.7□□□□□ -0.86
SMAD4-217ENST00000611848 SOX1O00570 391 aaPredicted RBP9.7□□□□□ -0.86
SMAD4-217ENST00000611848 MGEA5O60502 916 aa9.7□□□□□ -0.86
SMAD4-217ENST00000611848 SMC2O95347 1197 aa9.7□□□□□ -0.86
SMAD4-217ENST00000611848 STAG3L1P0CL83 205 aa9.7□□□□□ -0.86
SMAD4-217ENST00000611848 FGFR4P22455 802 aa9.7□□□□□ -0.86
SMAD4-217ENST00000611848 AXLP30530 894 aa9.7□□□□□ -0.86
SMAD4-217ENST00000611848 FXR1P51114 621 aaKnown RBP eCLIP9.7□□□□□ -0.86
SMAD4-217ENST00000611848 FAM189BP81408 668 aa9.7□□□□□ -0.86
SMAD4-217ENST00000611848 MBTD1Q05BQ5 628 aa9.7□□□□□ -0.86
SMAD4-217ENST00000611848 MAPK7Q13164 816 aa9.7□□□□□ -0.86
SMAD4-217ENST00000611848 E2F4Q16254 413 aa9.7□□□□□ -0.86
SMAD4-217ENST00000611848 ARSHQ5FYA8 562 aa9.7□□□□□ -0.86
SMAD4-217ENST00000611848 NPAS4Q8IUM7 802 aa9.7□□□□□ -0.86
SMAD4-217ENST00000611848 DAW1Q8N136 415 aa9.7□□□□□ -0.86
SMAD4-217ENST00000611848 PDILTQ8N807 584 aa9.7□□□□□ -0.86
SMAD4-217ENST00000611848 IQUBQ8NA54 791 aa9.7□□□□□ -0.86
SMAD4-217ENST00000611848 DEPTORQ8TB45 409 aa9.7□□□□□ -0.86
SMAD4-217ENST00000611848 ENOX1Q8TC92 643 aaKnown RBP9.7□□□□□ -0.86
SMAD4-217ENST00000611848 BSNDQ8WZ55 320 aa9.7□□□□□ -0.86
SMAD4-217ENST00000611848 PAGE5Q96GU1 130 aa9.7□□□□□ -0.86
SMAD4-217ENST00000611848 PRIMPOLQ96LW4 560 aa9.7□□□□□ -0.86
SMAD4-217ENST00000611848 RAD9AQ99638 391 aa9.7□□□□□ -0.86
SMAD4-217ENST00000611848 ZBED2Q9BTP6 218 aa9.7□□□□□ -0.86
SMAD4-217ENST00000611848 MINDY3Q9H8M7 445 aa9.7□□□□□ -0.86
SMAD4-217ENST00000611848 KCND1Q9NSA2 647 aa9.7□□□□□ -0.86
SMAD4-217ENST00000611848 PRMT7Q9NVM4 692 aaPredicted RBP9.7□□□□□ -0.86
SMAD4-217ENST00000611848 INSL6Q9Y581 213 aa9.7□□□□□ -0.86
SMAD4-217ENST00000611848 PHLPP2Q6ZVD8 1323 aa9.69□□□□□ -0.86
SMAD4-217ENST00000611848 C9IYK1 514 aa9.69□□□□□ -0.86
SMAD4-217ENST00000611848 CBFA2T2O43439 604 aa9.69□□□□□ -0.86
SMAD4-217ENST00000611848 TLL1O43897 1013 aa9.69□□□□□ -0.86
SMAD4-217ENST00000611848 ERLIN2O94905 339 aa9.69□□□□□ -0.86
SMAD4-217ENST00000611848 KRT18P05783 430 aaKnown RBP9.69□□□□□ -0.86
SMAD4-217ENST00000611848 SKIP12755 728 aa9.69□□□□□ -0.86
SMAD4-217ENST00000611848 DNAJB2P25686 324 aa9.69□□□□□ -0.86
SMAD4-217ENST00000611848 ERCC5P28715 1186 aaPredicted RBP9.69□□□□□ -0.86
SMAD4-217ENST00000611848 EFNA5P52803 228 aa9.69□□□□□ -0.86
SMAD4-217ENST00000611848 RABGGTBP53611 331 aa9.69□□□□□ -0.86
SMAD4-217ENST00000611848 SMTNP53814 917 aa9.69□□□□□ -0.86
SMAD4-217ENST00000611848 PEX3P56589 373 aa9.69□□□□□ -0.86
SMAD4-217ENST00000611848 CCZ1BP86790 482 aa9.69□□□□□ -0.86
SMAD4-217ENST00000611848 CCZ1P86791 482 aaPredicted RBP9.69□□□□□ -0.86
SMAD4-217ENST00000611848 RAD51AP2Q09MP3 1159 aa9.69□□□□□ -0.86
SMAD4-217ENST00000611848 DPYDQ12882 1025 aa9.69□□□□□ -0.86
SMAD4-217ENST00000611848 GIT2Q14161 759 aa9.69□□□□□ -0.86
SMAD4-217ENST00000611848 ARID5BQ14865 1188 aa9.69□□□□□ -0.86
SMAD4-217ENST00000611848 FAM187BQ17R55 369 aa9.69□□□□□ -0.86
SMAD4-217ENST00000611848 TWF2Q6IBS0 349 aaKnown RBP9.69□□□□□ -0.86
SMAD4-217ENST00000611848 GRAMD1CQ8IYS0 662 aa9.69□□□□□ -0.86
SMAD4-217ENST00000611848 SPIRE2Q8WWL2 714 aa9.69□□□□□ -0.86
SMAD4-217ENST00000611848 DHX58Q96C10 678 aa9.69□□□□□ -0.86
SMAD4-217ENST00000611848 TIFAQ96CG3 184 aa9.69□□□□□ -0.86
SMAD4-217ENST00000611848 LRCH3Q96II8 777 aa9.69□□□□□ -0.86
SMAD4-217ENST00000611848 REEP2Q9BRK0 252 aa9.69□□□□□ -0.86
SMAD4-217ENST00000611848 NTPCRQ9BSD7 190 aaKnown RBP9.69□□□□□ -0.86
SMAD4-217ENST00000611848 TRAIPQ9BWF2 469 aa9.69□□□□□ -0.86
SMAD4-217ENST00000611848 LRRC27Q9C0I9 530 aa9.69□□□□□ -0.86
SMAD4-217ENST00000611848 FZD8Q9H461 694 aa9.69□□□□□ -0.86
SMAD4-217ENST00000611848 ELAC1Q9H777 363 aaKnown RBP9.69□□□□□ -0.86
SMAD4-217ENST00000611848 MAGEF1Q9HAY2 307 aa9.69□□□□□ -0.86
SMAD4-217ENST00000611848 POLD4Q9HCU8 107 aa9.69□□□□□ -0.86
SMAD4-217ENST00000611848 AGPAT5Q9NUQ2 364 aa9.69□□□□□ -0.86
SMAD4-217ENST00000611848 LARSQ9P2J5 1176 aaKnown RBP9.69□□□□□ -0.86
SMAD4-217ENST00000611848 PIN4Q9Y237 131 aaKnown RBP9.69□□□□□ -0.86
SMAD4-217ENST00000611848 A0A0U1RQF3 1178 aa9.68□□□□□ -0.86
SMAD4-217ENST00000611848 CCDC169A6NNP5 214 aa9.68□□□□□ -0.86
SMAD4-217ENST00000611848 H0YCG3 227 aa9.68□□□□□ -0.86
SMAD4-217ENST00000611848 RBAK-RBAKDNI3L0D1 243 aa9.68□□□□□ -0.86
SMAD4-217ENST00000611848 ACKR2O00590 384 aa9.68□□□□□ -0.86
SMAD4-217ENST00000611848 FAM13AO94988 1023 aa9.68□□□□□ -0.86
SMAD4-217ENST00000611848 UPP2O95045 317 aa9.68□□□□□ -0.86
SMAD4-217ENST00000611848 ATP1A3P13637 1013 aa9.68□□□□□ -0.86
SMAD4-217ENST00000611848 PLS3P13797 630 aa9.68□□□□□ -0.86
SMAD4-217ENST00000611848 ZNF18P17022 549 aa9.68□□□□□ -0.86
SMAD4-217ENST00000611848 SCP2P22307 547 aa9.68□□□□□ -0.86
SMAD4-217ENST00000611848 PBX2P40425 430 aa9.68□□□□□ -0.86
SMAD4-217ENST00000611848 NPTX2P47972 431 aa9.68□□□□□ -0.86
SMAD4-217ENST00000611848 RAB27AP51159 221 aa9.68□□□□□ -0.86
SMAD4-217ENST00000611848 ZNF131P52739 623 aa9.68□□□□□ -0.86
SMAD4-217ENST00000611848 HTRA4P83105 476 aaPredicted RBP9.68□□□□□ -0.86
SMAD4-217ENST00000611848 AMPD3Q01432 767 aa9.68□□□□□ -0.86
SMAD4-217ENST00000611848 MAPK6Q16659 721 aa9.68□□□□□ -0.86
SMAD4-217ENST00000611848 FAM117BQ6P1L5 589 aa9.68□□□□□ -0.86
SMAD4-217ENST00000611848 NOTUMQ6P988 496 aa9.68□□□□□ -0.86
SMAD4-217ENST00000611848 TMCO2Q7Z6W1 182 aaPredicted RBP9.68□□□□□ -0.86
SMAD4-217ENST00000611848 FILIP1Q7Z7B0 1213 aa9.68□□□□□ -0.86
SMAD4-217ENST00000611848 CRIPAKQ8N1N5 446 aa9.68□□□□□ -0.86
SMAD4-217ENST00000611848 CCDC150Q8NCX0 1101 aa9.68□□□□□ -0.86
SMAD4-217ENST00000611848 CCDC51Q96ER9 411 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms