RNA–Protein interactions for RNA: ENST00000611689.4

GRIA3-205, Transcript of glutamate ionotropic receptor AMPA type subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GRIA3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA3-205ENST00000611689 BICD1Q96G01 975 aa17.04■□□□□ 0.32
GRIA3-205ENST00000611689 GTPBP4Q9BZE4 634 aaKnown RBP17.04■□□□□ 0.32
GRIA3-205ENST00000611689 IKZF4Q9H2S9 585 aa17.04■□□□□ 0.32
GRIA3-205ENST00000611689 PDZD7Q9H5P4 517 aa17.04■□□□□ 0.32
GRIA3-205ENST00000611689 TMEM206Q9H813 350 aa17.04■□□□□ 0.32
GRIA3-205ENST00000611689 EXOC7Q9UPT5 735 aa17.04■□□□□ 0.32
GRIA3-205ENST00000611689 TNFSF13BQ9Y275 285 aa17.04■□□□□ 0.32
GRIA3-205ENST00000611689 TET1Q8NFU7 2136 aa17.03■□□□□ 0.32
GRIA3-205ENST00000611689 UBE4BO95155 1302 aa17.03■□□□□ 0.32
GRIA3-205ENST00000611689 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.03■□□□□ 0.32
GRIA3-205ENST00000611689 ANKRD63C9JTQ0 380 aa17.03■□□□□ 0.32
GRIA3-205ENST00000611689 HNRNPDLO14979 420 aaKnown RBP17.03■□□□□ 0.32
GRIA3-205ENST00000611689 N4BP3O15049 544 aa17.03■□□□□ 0.32
GRIA3-205ENST00000611689 EFCAB14O75071 495 aa17.03■□□□□ 0.32
GRIA3-205ENST00000611689 TOM1L1O75674 476 aa17.03■□□□□ 0.32
GRIA3-205ENST00000611689 BMP6P22004 513 aa17.03■□□□□ 0.32
GRIA3-205ENST00000611689 PROZP22891 400 aa17.03■□□□□ 0.32
GRIA3-205ENST00000611689 LIG4P49917 911 aa17.03■□□□□ 0.32
GRIA3-205ENST00000611689 FAM189BP81408 668 aa17.03■□□□□ 0.32
GRIA3-205ENST00000611689 COBLL1Q53SF7 1204 aa17.03■□□□□ 0.32
GRIA3-205ENST00000611689 TWF2Q6IBS0 349 aaKnown RBP17.03■□□□□ 0.32
GRIA3-205ENST00000611689 SLC39A4Q6P5W5 647 aa17.03■□□□□ 0.32
GRIA3-205ENST00000611689 SLC27A1Q6PCB7 646 aa17.03■□□□□ 0.32
GRIA3-205ENST00000611689 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.03■□□□□ 0.32
GRIA3-205ENST00000611689 NELFCDQ8IXH7 590 aa17.03■□□□□ 0.32
GRIA3-205ENST00000611689 SYCP3Q8IZU3 236 aa17.03■□□□□ 0.32
GRIA3-205ENST00000611689 GUF1Q8N442 669 aaKnown RBP17.03■□□□□ 0.32
GRIA3-205ENST00000611689 SYAP1Q96A49 352 aaPredicted RBP17.03■□□□□ 0.32
GRIA3-205ENST00000611689 ZBTB45Q96K62 511 aaPredicted RBP17.03■□□□□ 0.32
GRIA3-205ENST00000611689 TRAIPQ9BWF2 469 aa17.03■□□□□ 0.32
GRIA3-205ENST00000611689 MAPK8IP1Q9UQF2 711 aa17.03■□□□□ 0.32
GRIA3-205ENST00000611689 C9IYK1 514 aa17.02■□□□□ 0.32
GRIA3-205ENST00000611689 ABLIM1O14639 778 aa17.02■□□□□ 0.32
GRIA3-205ENST00000611689 PRCPP42785 496 aa17.02■□□□□ 0.32
GRIA3-205ENST00000611689 KNOP1Q1ED39 458 aaKnown RBP17.02■□□□□ 0.32
GRIA3-205ENST00000611689 SLC24A5Q71RS6 500 aa17.02■□□□□ 0.32
GRIA3-205ENST00000611689 EIF2AQ9BY44 585 aaKnown RBP17.02■□□□□ 0.32
GRIA3-205ENST00000611689 UBE2OQ9C0C9 1292 aaKnown RBP17.02■□□□□ 0.32
GRIA3-205ENST00000611689 C1orf112Q9NSG2 853 aa17.02■□□□□ 0.32
GRIA3-205ENST00000611689 ZMYM2Q9UBW7 1377 aa17.02■□□□□ 0.31
GRIA3-205ENST00000611689 A0A0U1RQF3 1178 aa17.01■□□□□ 0.31
GRIA3-205ENST00000611689 TISP43B9A030 160 aa17.01■□□□□ 0.31
GRIA3-205ENST00000611689 TGFB1I1O43294 461 aa17.01■□□□□ 0.31
GRIA3-205ENST00000611689 KIF20AO95235 890 aa17.01■□□□□ 0.31
GRIA3-205ENST00000611689 NPTXRO95502 500 aa17.01■□□□□ 0.31
GRIA3-205ENST00000611689 BMP8BP34820 402 aa17.01■□□□□ 0.31
GRIA3-205ENST00000611689 WDR5P61964 334 aaKnown RBP17.01■□□□□ 0.31
GRIA3-205ENST00000611689 SHHQ15465 462 aa17.01■□□□□ 0.31
GRIA3-205ENST00000611689 C9orf50Q5SZB4 431 aa17.01■□□□□ 0.31
GRIA3-205ENST00000611689 RASIP1Q5U651 963 aa17.01■□□□□ 0.31
GRIA3-205ENST00000611689 MPZL3Q6UWV2 235 aa17.01■□□□□ 0.31
GRIA3-205ENST00000611689 ZBTB33Q86T24 672 aa17.01■□□□□ 0.31
GRIA3-205ENST00000611689 ADSSL1Q8N142 457 aa17.01■□□□□ 0.31
GRIA3-205ENST00000611689 TCHPQ9BT92 498 aa17.01■□□□□ 0.31
GRIA3-205ENST00000611689 HAPLN2Q9GZV7 340 aa17.01■□□□□ 0.31
GRIA3-205ENST00000611689 GBP3Q9H0R5 595 aa17.01■□□□□ 0.31
GRIA3-205ENST00000611689 CDT1Q9H211 546 aa17.01■□□□□ 0.31
GRIA3-205ENST00000611689 FAM105AQ9NUU6 356 aa17.01■□□□□ 0.31
GRIA3-205ENST00000611689 CXXC1Q9P0U4 656 aaPredicted RBP17.01■□□□□ 0.31
GRIA3-205ENST00000611689 PCDHB2Q9Y5E7 798 aa17.01■□□□□ 0.31
GRIA3-205ENST00000611689 STYXL1Q9Y6J8 313 aa17.01■□□□□ 0.31
GRIA3-205ENST00000611689 ZBBXA8MT70 800 aa17■□□□□ 0.31
GRIA3-205ENST00000611689 PPP1R3GB7ZBB8 358 aa17■□□□□ 0.31
GRIA3-205ENST00000611689 CLDN3O15551 220 aa17■□□□□ 0.31
GRIA3-205ENST00000611689 ZNF623O75123 536 aa17■□□□□ 0.31
GRIA3-205ENST00000611689 MCF2P10911 925 aa17■□□□□ 0.31
GRIA3-205ENST00000611689 CD44P16070 742 aaKnown RBP17■□□□□ 0.31
GRIA3-205ENST00000611689 ADSSP30520 456 aa17■□□□□ 0.31
GRIA3-205ENST00000611689 RAB27AP51159 221 aa17■□□□□ 0.31
GRIA3-205ENST00000611689 MCL1Q07820 350 aa17■□□□□ 0.31
GRIA3-205ENST00000611689 ZNF568Q3ZCX4 644 aa17■□□□□ 0.31
GRIA3-205ENST00000611689 SLFN12LQ6IEE8 588 aa17■□□□□ 0.31
GRIA3-205ENST00000611689 MRPL10Q7Z7H8 261 aaKnown RBP17■□□□□ 0.31
GRIA3-205ENST00000611689 ECHDC2Q86YB7 292 aa17■□□□□ 0.31
GRIA3-205ENST00000611689 CRIPAKQ8N1N5 446 aa17■□□□□ 0.31
GRIA3-205ENST00000611689 SMG8Q8ND04 991 aaKnown RBP17■□□□□ 0.31
GRIA3-205ENST00000611689 ADPGKQ9BRR6 497 aa17■□□□□ 0.31
GRIA3-205ENST00000611689 KCTD10Q9H3F6 313 aa17■□□□□ 0.31
GRIA3-205ENST00000611689 ANKFY1Q9P2R3 1169 aa17■□□□□ 0.31
GRIA3-205ENST00000611689 A0A0B4J269 797 aa16.99■□□□□ 0.31
GRIA3-205ENST00000611689 AMHP03971 560 aa16.99■□□□□ 0.31
GRIA3-205ENST00000611689 SKIP12755 728 aa16.99■□□□□ 0.31
GRIA3-205ENST00000611689 KCNJ6P48051 423 aa16.99■□□□□ 0.31
GRIA3-205ENST00000611689 NLRP12P59046 1061 aa16.99■□□□□ 0.31
GRIA3-205ENST00000611689 SNRPFP62306 86 aaKnown RBP16.99■□□□□ 0.31
GRIA3-205ENST00000611689 DEFB103AP81534 67 aa16.99■□□□□ 0.31
GRIA3-205ENST00000611689 NOLC1Q14978 699 aaKnown RBP eCLIP16.99■□□□□ 0.31
GRIA3-205ENST00000611689 DCAF4L1Q3SXM0 396 aa16.99■□□□□ 0.31
GRIA3-205ENST00000611689 APBB1IPQ7Z5R6 666 aaPredicted RBP16.99■□□□□ 0.31
GRIA3-205ENST00000611689 ZNF598Q86UK7 904 aaKnown RBP16.99■□□□□ 0.31
GRIA3-205ENST00000611689 TRIM6Q9C030 488 aaPredicted RBP16.99■□□□□ 0.31
GRIA3-205ENST00000611689 MTIF3Q9H2K0 278 aaKnown RBP16.99■□□□□ 0.31
GRIA3-205ENST00000611689 ELAC1Q9H777 363 aaKnown RBP16.99■□□□□ 0.31
GRIA3-205ENST00000611689 IPPQ9Y573 584 aa16.99■□□□□ 0.31
GRIA3-205ENST00000611689 SLC4A7Q9Y6M7 1214 aa16.99■□□□□ 0.31
GRIA3-205ENST00000611689 PDXKO00764 312 aa16.98■□□□□ 0.31
GRIA3-205ENST00000611689 TNRC18O15417 2968 aaPredicted RBP16.98■□□□□ 0.31
GRIA3-205ENST00000611689 LETM1O95202 739 aaPredicted RBP16.98■□□□□ 0.31
GRIA3-205ENST00000611689 EOMESO95936 686 aa16.98■□□□□ 0.31
GRIA3-205ENST00000611689 HARSP12081 509 aaKnown RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms