RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 WRAP73Q9P2S5 460 aaPredicted RBP16.27■□□□□ 0.19
PCDHGB1-202ENST00000611598 A8MUI8 341 aa16.26■□□□□ 0.19
PCDHGB1-202ENST00000611598 TISP43B9A030 160 aa16.26■□□□□ 0.19
PCDHGB1-202ENST00000611598 PDE6CP51160 858 aa16.26■□□□□ 0.19
PCDHGB1-202ENST00000611598 ALDH5A1P51649 535 aaPredicted RBP16.26■□□□□ 0.19
PCDHGB1-202ENST00000611598 IKQ13123 557 aaPredicted RBP16.26■□□□□ 0.19
PCDHGB1-202ENST00000611598 SIX1Q15475 284 aaPredicted RBP16.26■□□□□ 0.19
PCDHGB1-202ENST00000611598 SLC15A2Q16348 729 aa16.26■□□□□ 0.19
PCDHGB1-202ENST00000611598 NFIL3Q16649 462 aa16.26■□□□□ 0.19
PCDHGB1-202ENST00000611598 SIAH1Q8IUQ4 282 aa16.26■□□□□ 0.19
PCDHGB1-202ENST00000611598 CDC42EP4Q9H3Q1 356 aaKnown RBP16.26■□□□□ 0.19
PCDHGB1-202ENST00000611598 ECT2Q9H8V3 914 aa16.26■□□□□ 0.19
PCDHGB1-202ENST00000611598 EBF2Q9HAK2 575 aa16.26■□□□□ 0.19
PCDHGB1-202ENST00000611598 AAASQ9NRG9 546 aa16.26■□□□□ 0.19
PCDHGB1-202ENST00000611598 DNAJC17Q9NVM6 304 aaKnown RBP16.26■□□□□ 0.19
PCDHGB1-202ENST00000611598 PARP2Q9UGN5 583 aa16.26■□□□□ 0.19
PCDHGB1-202ENST00000611598 TMEM120BA0PK00 339 aa16.26■□□□□ 0.19
PCDHGB1-202ENST00000611598 TP73O15350 636 aa16.26■□□□□ 0.19
PCDHGB1-202ENST00000611598 EXOC3O60645 756 aa16.26■□□□□ 0.19
PCDHGB1-202ENST00000611598 HLA-DOAP06340 250 aa16.26■□□□□ 0.19
PCDHGB1-202ENST00000611598 NQO1P15559 274 aaKnown RBP16.26■□□□□ 0.19
PCDHGB1-202ENST00000611598 HSPA6P17066 643 aa16.26■□□□□ 0.19
PCDHGB1-202ENST00000611598 PAX7P23759 505 aa16.26■□□□□ 0.19
PCDHGB1-202ENST00000611598 CIITAP33076 1130 aa16.26■□□□□ 0.19
PCDHGB1-202ENST00000611598 TCP10Q12799 353 aa16.26■□□□□ 0.19
PCDHGB1-202ENST00000611598 SLMAPQ14BN4 828 aa16.26■□□□□ 0.19
PCDHGB1-202ENST00000611598 CLUL1Q15846 466 aa16.26■□□□□ 0.19
PCDHGB1-202ENST00000611598 CRY2Q49AN0 593 aa16.26■□□□□ 0.19
PCDHGB1-202ENST00000611598 MFSD5Q6N075 450 aa16.26■□□□□ 0.19
PCDHGB1-202ENST00000611598 VSTM1Q6UX27 236 aa16.26■□□□□ 0.19
PCDHGB1-202ENST00000611598 FBXO11Q86XK2 927 aa16.26■□□□□ 0.19
PCDHGB1-202ENST00000611598 CRAMP1Q96RY5 1269 aa16.26■□□□□ 0.19
PCDHGB1-202ENST00000611598 WDR18Q9BV38 432 aa16.26■□□□□ 0.19
PCDHGB1-202ENST00000611598 PNMA3Q9UL41 463 aa16.26■□□□□ 0.19
PCDHGB1-202ENST00000611598 USP15Q9Y4E8 981 aaPredicted RBP16.26■□□□□ 0.19
PCDHGB1-202ENST00000611598 IGLV3-22A0A075B6J6 115 aa16.25■□□□□ 0.19
PCDHGB1-202ENST00000611598 CFAP73A6NFT4 308 aa16.25■□□□□ 0.19
PCDHGB1-202ENST00000611598 IGF2BP3O00425 579 aaKnown RBP eCLIP16.25■□□□□ 0.19
PCDHGB1-202ENST00000611598 HGSO14964 777 aaPredicted RBP16.25■□□□□ 0.19
PCDHGB1-202ENST00000611598 GH1P01241 217 aa16.25■□□□□ 0.19
PCDHGB1-202ENST00000611598 GPC5P78333 572 aa16.25■□□□□ 0.19
PCDHGB1-202ENST00000611598 RIPK1Q13546 671 aa16.25■□□□□ 0.19
PCDHGB1-202ENST00000611598 ZNF268Q14587 947 aaPredicted RBP16.25■□□□□ 0.19
PCDHGB1-202ENST00000611598 NAA25Q14CX7 972 aa16.25■□□□□ 0.19
PCDHGB1-202ENST00000611598 ODR4Q5SWX8 454 aa16.25■□□□□ 0.19
PCDHGB1-202ENST00000611598 PAXIP1Q6ZW49 1069 aaPredicted RBP16.25■□□□□ 0.19
PCDHGB1-202ENST00000611598 TAOK1Q7L7X3 1001 aa16.25■□□□□ 0.19
PCDHGB1-202ENST00000611598 SLC13A5Q86YT5 568 aaPredicted RBP16.25■□□□□ 0.19
PCDHGB1-202ENST00000611598 TEX2Q8IWB9 1127 aa16.25■□□□□ 0.19
PCDHGB1-202ENST00000611598 ANKRD42Q8N9B4 389 aa16.25■□□□□ 0.19
PCDHGB1-202ENST00000611598 DCAF4Q8WV16 495 aa16.25■□□□□ 0.19
PCDHGB1-202ENST00000611598 ARHGEF2Q92974 986 aaKnown RBP16.25■□□□□ 0.19
PCDHGB1-202ENST00000611598 CD101Q93033 1021 aa16.25■□□□□ 0.19
PCDHGB1-202ENST00000611598 EMSYQ7Z589 1322 aa16.25■□□□□ 0.19
PCDHGB1-202ENST00000611598 SMCHD1A6NHR9 2005 aa16.25■□□□□ 0.19
PCDHGB1-202ENST00000611598 ANP32DO95626 131 aa16.25■□□□□ 0.19
PCDHGB1-202ENST00000611598 DLATP10515 647 aaKnown RBP16.25■□□□□ 0.19
PCDHGB1-202ENST00000611598 PPP2R5AQ15172 486 aa16.25■□□□□ 0.19
PCDHGB1-202ENST00000611598 ZKSCAN8Q15776 578 aaPredicted RBP16.25■□□□□ 0.19
PCDHGB1-202ENST00000611598 ZNF568Q3ZCX4 644 aa16.25■□□□□ 0.19
PCDHGB1-202ENST00000611598 TRAPPC3LQ5T215 181 aa16.25■□□□□ 0.19
PCDHGB1-202ENST00000611598 CRELD2Q6UXH1 353 aaPredicted RBP16.25■□□□□ 0.19
PCDHGB1-202ENST00000611598 OTOP1Q7RTM1 612 aa16.25■□□□□ 0.19
PCDHGB1-202ENST00000611598 GDAP1Q8TB36 358 aa16.25■□□□□ 0.19
PCDHGB1-202ENST00000611598 PCIF1Q9H4Z3 704 aa16.25■□□□□ 0.19
PCDHGB1-202ENST00000611598 PCDHAC2Q9Y5I4 1007 aa16.25■□□□□ 0.19
PCDHGB1-202ENST00000611598 SGPL1O95470 568 aa16.24■□□□□ 0.19
PCDHGB1-202ENST00000611598 CHKAP35790 457 aa16.24■□□□□ 0.19
PCDHGB1-202ENST00000611598 PPP3CAQ08209 521 aa16.24■□□□□ 0.19
PCDHGB1-202ENST00000611598 CRYMQ14894 314 aa16.24■□□□□ 0.19
PCDHGB1-202ENST00000611598 CYP1B1Q16678 543 aa16.24■□□□□ 0.19
PCDHGB1-202ENST00000611598 GALNTL6Q49A17 601 aa16.24■□□□□ 0.19
PCDHGB1-202ENST00000611598 NUGGCQ68CJ6 796 aa16.24■□□□□ 0.19
PCDHGB1-202ENST00000611598 EP400NLQ6ZTU2 488 aa16.24■□□□□ 0.19
PCDHGB1-202ENST00000611598 L3MBTL3Q96JM7 780 aaPredicted RBP16.24■□□□□ 0.19
PCDHGB1-202ENST00000611598 STMN4Q9H169 189 aaPredicted RBP16.24■□□□□ 0.19
PCDHGB1-202ENST00000611598 TRIM33Q9UPN9 1127 aa16.24■□□□□ 0.19
PCDHGB1-202ENST00000611598 GOLGB1Q14789 3259 aaKnown RBP16.24■□□□□ 0.19
PCDHGB1-202ENST00000611598 KRT16P08779 473 aa16.24■□□□□ 0.19
PCDHGB1-202ENST00000611598 BCRP11274 1271 aa16.24■□□□□ 0.19
PCDHGB1-202ENST00000611598 GBP1P32455 592 aa16.24■□□□□ 0.19
PCDHGB1-202ENST00000611598 UBXN2AP68543 259 aa16.24■□□□□ 0.19
PCDHGB1-202ENST00000611598 MPP2Q14168 576 aa16.24■□□□□ 0.19
PCDHGB1-202ENST00000611598 APOBEC3HQ6NTF7 200 aaKnown RBP16.24■□□□□ 0.19
PCDHGB1-202ENST00000611598 ZSWIM2Q8NEG5 633 aa16.24■□□□□ 0.19
PCDHGB1-202ENST00000611598 RPS6KC1Q96S38 1066 aa16.24■□□□□ 0.19
PCDHGB1-202ENST00000611598 C15orf41Q9Y2V0 281 aa16.24■□□□□ 0.19
PCDHGB1-202ENST00000611598 PASKQ96RG2 1323 aa16.23■□□□□ 0.19
PCDHGB1-202ENST00000611598 F5H6K3 240 aa16.23■□□□□ 0.19
PCDHGB1-202ENST00000611598 TULP1O00294 542 aaPredicted RBP16.23■□□□□ 0.19
PCDHGB1-202ENST00000611598 SPOPO43791 374 aa16.23■□□□□ 0.19
PCDHGB1-202ENST00000611598 FOSP01100 380 aaPredicted RBP16.23■□□□□ 0.19
PCDHGB1-202ENST00000611598 CHRNB2P17787 502 aa16.23■□□□□ 0.19
PCDHGB1-202ENST00000611598 GCLMP48507 274 aa16.23■□□□□ 0.19
PCDHGB1-202ENST00000611598 SNX1Q13596 522 aa16.23■□□□□ 0.19
PCDHGB1-202ENST00000611598 RRP1BQ14684 758 aaKnown RBP16.23■□□□□ 0.19
PCDHGB1-202ENST00000611598 LRCH2Q5VUJ6 765 aa16.23■□□□□ 0.19
PCDHGB1-202ENST00000611598 NSMFQ6X4W1 530 aa16.23■□□□□ 0.19
PCDHGB1-202ENST00000611598 RNF207Q6ZRF8 634 aa16.23■□□□□ 0.19
PCDHGB1-202ENST00000611598 MIGA2Q7L4E1 593 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms