RNA–Protein interactions for RNA: ENST00000611405.4

SRRT-213, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SRRT, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-213ENST00000611405 BUB1BO60566 1050 aaPredicted RBP12.89□□□□□ -0.35
SRRT-213ENST00000611405 SUPT20HL2P0C7V6 817 aa12.89□□□□□ -0.35
SRRT-213ENST00000611405 GARTP22102 1010 aa12.89□□□□□ -0.35
SRRT-213ENST00000611405 ICAM3P32942 547 aa12.89□□□□□ -0.35
SRRT-213ENST00000611405 HADHBP55084 474 aaKnown RBP12.89□□□□□ -0.35
SRRT-213ENST00000611405 PRKCEQ02156 737 aa12.89□□□□□ -0.35
SRRT-213ENST00000611405 GUCY2DQ02846 1103 aa12.89□□□□□ -0.35
SRRT-213ENST00000611405 XKR3Q5GH77 459 aa12.89□□□□□ -0.35
SRRT-213ENST00000611405 CCDC60Q8IWA6 550 aaPredicted RBP12.89□□□□□ -0.35
SRRT-213ENST00000611405 FAM71AQ8IYT1 594 aa12.89□□□□□ -0.35
SRRT-213ENST00000611405 DNERQ8NFT8 737 aa12.89□□□□□ -0.35
SRRT-213ENST00000611405 SAAL1Q96ER3 474 aa12.89□□□□□ -0.35
SRRT-213ENST00000611405 EPB41L5Q9HCM4 733 aa12.89□□□□□ -0.35
SRRT-213ENST00000611405 IGSF9BQ9UPX0 1349 aa12.88□□□□□ -0.35
SRRT-213ENST00000611405 CCDC188H7C350 402 aa12.88□□□□□ -0.35
SRRT-213ENST00000611405 RNF40O75150 1001 aa12.88□□□□□ -0.35
SRRT-213ENST00000611405 ABCB4P21439 1286 aa12.88□□□□□ -0.35
SRRT-213ENST00000611405 GPC3P51654 580 aa12.88□□□□□ -0.35
SRRT-213ENST00000611405 MAP2K1Q02750 393 aaPredicted RBP12.88□□□□□ -0.35
SRRT-213ENST00000611405 STXBP2Q15833 593 aa12.88□□□□□ -0.35
SRRT-213ENST00000611405 BRDTQ58F21 947 aaPredicted RBP12.88□□□□□ -0.35
SRRT-213ENST00000611405 ALS2CLQ60I27 953 aa12.88□□□□□ -0.35
SRRT-213ENST00000611405 SLC20A1Q8WUM9 679 aa12.88□□□□□ -0.35
SRRT-213ENST00000611405 POMGNT1Q8WZA1 660 aa12.88□□□□□ -0.35
SRRT-213ENST00000611405 ISCUQ9H1K1 167 aa12.88□□□□□ -0.35
SRRT-213ENST00000611405 OSGEPQ9NPF4 335 aa12.88□□□□□ -0.35
SRRT-213ENST00000611405 TAS2R14Q9NYV8 317 aa12.88□□□□□ -0.35
SRRT-213ENST00000611405 ZHX1Q9UKY1 873 aaPredicted RBP12.88□□□□□ -0.35
SRRT-213ENST00000611405 TTC7AQ9ULT0 858 aaPredicted RBP12.88□□□□□ -0.35
SRRT-213ENST00000611405 SSC5DA1L4H1 1573 aa12.88□□□□□ -0.35
SRRT-213ENST00000611405 PFASO15067 1338 aa12.88□□□□□ -0.35
SRRT-213ENST00000611405 SCP2P22307 547 aa12.88□□□□□ -0.35
SRRT-213ENST00000611405 GGCXP38435 758 aa12.88□□□□□ -0.35
SRRT-213ENST00000611405 HIRAP54198 1017 aaPredicted RBP12.88□□□□□ -0.35
SRRT-213ENST00000611405 CYP24A1Q07973 514 aa12.88□□□□□ -0.35
SRRT-213ENST00000611405 SLC39A4Q6P5W5 647 aa12.88□□□□□ -0.35
SRRT-213ENST00000611405 RPUSD2Q8IZ73 545 aaKnown RBP12.88□□□□□ -0.35
SRRT-213ENST00000611405 EIF1ADQ8N9N8 165 aaKnown RBP12.88□□□□□ -0.35
SRRT-213ENST00000611405 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.88□□□□□ -0.354e-7■■■■■ 58.1
SRRT-213ENST00000611405 CCDC127Q96BQ5 260 aa12.88□□□□□ -0.35
SRRT-213ENST00000611405 ARHGEF26Q96DR7 871 aa12.88□□□□□ -0.35
SRRT-213ENST00000611405 THAP2Q9H0W7 228 aa12.88□□□□□ -0.35
SRRT-213ENST00000611405 XPNPEP1Q9NQW7 623 aa12.88□□□□□ -0.35
SRRT-213ENST00000611405 NOC2LQ9Y3T9 749 aaKnown RBP12.88□□□□□ -0.35
SRRT-213ENST00000611405 AGPSO00116 658 aa12.87□□□□□ -0.35
SRRT-213ENST00000611405 RAD51CO43502 376 aa12.87□□□□□ -0.35
SRRT-213ENST00000611405 USP2O75604 605 aaPredicted RBP12.87□□□□□ -0.35
SRRT-213ENST00000611405 SOX10P56693 466 aa12.87□□□□□ -0.35
SRRT-213ENST00000611405 KLHL7Q8IXQ5 586 aa12.87□□□□□ -0.35
SRRT-213ENST00000611405 GPD1LQ8N335 351 aa12.87□□□□□ -0.35
SRRT-213ENST00000611405 GOLGA6L1Q8N7Z2 621 aa12.87□□□□□ -0.35
SRRT-213ENST00000611405 POLR3FQ9H1D9 316 aaPredicted RBP12.87□□□□□ -0.35
SRRT-213ENST00000611405 CCDC66A2RUB6 948 aa12.87□□□□□ -0.35
SRRT-213ENST00000611405 PHACTR2O75167 634 aa12.87□□□□□ -0.35
SRRT-213ENST00000611405 RTN2O75298 545 aa12.87□□□□□ -0.35
SRRT-213ENST00000611405 FTLP02792 175 aaPredicted RBP12.87□□□□□ -0.35
SRRT-213ENST00000611405 USP8P40818 1118 aa12.87□□□□□ -0.35
SRRT-213ENST00000611405 CARSP49589 748 aaKnown RBP12.87□□□□□ -0.35
SRRT-213ENST00000611405 SP4Q02446 784 aa12.87□□□□□ -0.35
SRRT-213ENST00000611405 R3HDM1Q15032 1099 aaKnown RBP12.87□□□□□ -0.35
SRRT-213ENST00000611405 PALB2Q86YC2 1186 aa12.87□□□□□ -0.35
SRRT-213ENST00000611405 SHC3Q92529 594 aa12.87□□□□□ -0.35
SRRT-213ENST00000611405 SEMA4DQ92854 862 aa12.87□□□□□ -0.35
SRRT-213ENST00000611405 KREMEN1Q96MU8 473 aa12.87□□□□□ -0.35
SRRT-213ENST00000611405 ARHGAP28Q9P2N2 729 aa12.87□□□□□ -0.35
SRRT-213ENST00000611405 FBXO40Q9UH90 709 aa12.87□□□□□ -0.35
SRRT-213ENST00000611405 KRIT1O00522 736 aa12.86□□□□□ -0.35
SRRT-213ENST00000611405 ATG7O95352 703 aa12.86□□□□□ -0.35
SRRT-213ENST00000611405 GZMAP12544 262 aa12.86□□□□□ -0.35
SRRT-213ENST00000611405 GPC5P78333 572 aa12.86□□□□□ -0.35
SRRT-213ENST00000611405 CLUL1Q15846 466 aa12.86□□□□□ -0.35
SRRT-213ENST00000611405 PTPROQ16827 1216 aa12.86□□□□□ -0.35
SRRT-213ENST00000611405 PPM1KQ8N3J5 372 aa12.86□□□□□ -0.35
SRRT-213ENST00000611405 FBXL13Q8NEE6 735 aa12.86□□□□□ -0.35
SRRT-213ENST00000611405 WHAMMQ8TF30 809 aa12.86□□□□□ -0.35
SRRT-213ENST00000611405 CASKIN2Q8WXE0 1202 aa12.86□□□□□ -0.35
SRRT-213ENST00000611405 IFT81Q8WYA0 676 aa12.86□□□□□ -0.35
SRRT-213ENST00000611405 KCNN1Q92952 543 aa12.86□□□□□ -0.35
SRRT-213ENST00000611405 KAT5Q92993 513 aa12.86□□□□□ -0.35
SRRT-213ENST00000611405 NT5C1BQ96P26 610 aa12.86□□□□□ -0.35
SRRT-213ENST00000611405 KIAA1586Q9HCI6 787 aa12.86□□□□□ -0.35
SRRT-213ENST00000611405 TELO2Q9Y4R8 837 aa12.86□□□□□ -0.35
SRRT-213ENST00000611405 ADGRA3Q8IWK6 1321 aa12.86□□□□□ -0.35
SRRT-213ENST00000611405 ERICH4A6NGS2 130 aa12.86□□□□□ -0.35
SRRT-213ENST00000611405 HNRNPDLO14979 420 aaKnown RBP12.86□□□□□ -0.35
SRRT-213ENST00000611405 DDX3YO15523 660 aaKnown RBP12.86□□□□□ -0.35
SRRT-213ENST00000611405 OPA1O60313 960 aa12.86□□□□□ -0.35
SRRT-213ENST00000611405 HSF2BPO75031 334 aa12.86□□□□□ -0.35
SRRT-213ENST00000611405 SGPL1O95470 568 aa12.86□□□□□ -0.35
SRRT-213ENST00000611405 LMAN1P49257 510 aa12.86□□□□□ -0.35
SRRT-213ENST00000611405 ANKRD35Q8N283 1001 aa12.86□□□□□ -0.35
SRRT-213ENST00000611405 EPS8L1Q8TE68 723 aa12.86□□□□□ -0.35
SRRT-213ENST00000611405 ZBTB9Q96C00 473 aa12.86□□□□□ -0.35
SRRT-213ENST00000611405 BICD1Q96G01 975 aa12.86□□□□□ -0.35
SRRT-213ENST00000611405 SLITRK6Q9H5Y7 841 aa12.86□□□□□ -0.35
SRRT-213ENST00000611405 FAM204AQ9H8W3 233 aa12.86□□□□□ -0.35
SRRT-213ENST00000611405 ZNF302Q9NR11 478 aa12.86□□□□□ -0.35
SRRT-213ENST00000611405 RAB20Q9NX57 234 aa12.86□□□□□ -0.35
SRRT-213ENST00000611405 NOCTQ9UK39 431 aaKnown RBP12.86□□□□□ -0.35
SRRT-213ENST00000611405 NFU1Q9UMS0 254 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms