RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 SGPL1O95470 568 aa7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 SCP2P22307 547 aa7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 FLT3P36888 993 aa7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 SLC12A3P55017 1021 aa7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 MAPK7Q13164 816 aa7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 CBWD6Q4V339 395 aa7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 CBWD3Q5JTY5 395 aa7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 CBWD5Q5RIA9 395 aa7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 KRT39Q6A163 491 aa7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 ZBTB33Q86T24 672 aa7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 LRRC34Q8IZ02 419 aa7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 IQCKQ8N0W5 287 aa7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 ANKRD35Q8N283 1001 aa7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 ZNF668Q96K58 619 aaPredicted RBP7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 CRAMP1Q96RY5 1269 aa7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 POP1Q99575 1024 aaKnown RBP7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 CARD9Q9H257 536 aa7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 GANQ9H2C0 597 aa7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 TUFT1Q9NNX1 390 aa7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 NXF1Q9UBU9 619 aaKnown RBP7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 ZBTB12Q9Y330 459 aaPredicted RBP7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 TMEM150BA6NC51 233 aa7.34□□□□□ -1.23
SYNPO2-206ENST00000610556 RTN2O75298 545 aa7.34□□□□□ -1.23
SYNPO2-206ENST00000610556 RPS6KA5O75582 802 aa7.34□□□□□ -1.23
SYNPO2-206ENST00000610556 IL1R1P14778 569 aa7.34□□□□□ -1.23
SYNPO2-206ENST00000610556 RASA3Q14644 834 aa7.34□□□□□ -1.23
SYNPO2-206ENST00000610556 ARSHQ5FYA8 562 aa7.34□□□□□ -1.23
SYNPO2-206ENST00000610556 C6orf163Q5TEZ5 329 aa7.34□□□□□ -1.23
SYNPO2-206ENST00000610556 AGBL2Q5U5Z8 902 aa7.34□□□□□ -1.23
SYNPO2-206ENST00000610556 BSPRYQ5W0U4 402 aa7.34□□□□□ -1.23
SYNPO2-206ENST00000610556 SCYL2Q6P3W7 929 aa7.34□□□□□ -1.23
SYNPO2-206ENST00000610556 EEPD1Q7L9B9 569 aa7.34□□□□□ -1.23
SYNPO2-206ENST00000610556 NT5DC3Q86UY8 548 aa7.34□□□□□ -1.23
SYNPO2-206ENST00000610556 STMN2Q93045 179 aa7.34□□□□□ -1.23
SYNPO2-206ENST00000610556 AGBL1Q96MI9 1066 aa7.34□□□□□ -1.23
SYNPO2-206ENST00000610556 PURBQ96QR8 312 aaKnown RBP7.34□□□□□ -1.23
SYNPO2-206ENST00000610556 PABPC3Q9H361 631 aaKnown RBP7.34□□□□□ -1.23
SYNPO2-206ENST00000610556 DDX20Q9UHI6 824 aaKnown RBP7.34□□□□□ -1.23
SYNPO2-206ENST00000610556 DKC1O60832 514 aaKnown RBP eCLIP7.34□□□□□ -1.23
SYNPO2-206ENST00000610556 ADRA2BP18089 450 aa7.34□□□□□ -1.23
SYNPO2-206ENST00000610556 HMGB2P26583 209 aaKnown RBP7.34□□□□□ -1.23
SYNPO2-206ENST00000610556 CALRP27797 417 aaKnown RBP7.34□□□□□ -1.23
SYNPO2-206ENST00000610556 IFI35P80217 286 aaPredicted RBP7.34□□□□□ -1.23
SYNPO2-206ENST00000610556 TFAMQ00059 246 aaKnown RBP7.34□□□□□ -1.23
SYNPO2-206ENST00000610556 BBS9Q3SYG4 887 aa7.34□□□□□ -1.23
SYNPO2-206ENST00000610556 HHIPL2Q6UWX4 724 aa7.34□□□□□ -1.23
SYNPO2-206ENST00000610556 IRF2BP2Q7Z5L9 587 aa7.34□□□□□ -1.23
SYNPO2-206ENST00000610556 TMC3Q7Z5M5 1100 aa7.34□□□□□ -1.23
SYNPO2-206ENST00000610556 KRT35Q92764 455 aa7.34□□□□□ -1.23
SYNPO2-206ENST00000610556 KAT5Q92993 513 aa7.34□□□□□ -1.23
SYNPO2-206ENST00000610556 ATP6V0A1Q93050 837 aa7.34□□□□□ -1.23
SYNPO2-206ENST00000610556 CNKSR1Q969H4 720 aa7.34□□□□□ -1.23
SYNPO2-206ENST00000610556 TGS1Q96RS0 853 aaKnown RBP7.34□□□□□ -1.23
SYNPO2-206ENST00000610556 WNT8AQ9H1J5 351 aa7.34□□□□□ -1.23
SYNPO2-206ENST00000610556 TRAF3IP3Q9Y228 551 aa7.34□□□□□ -1.23
SYNPO2-206ENST00000610556 COL1A1P02452 1464 aaPredicted RBP7.34□□□□□ -1.23
SYNPO2-206ENST00000610556 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.34□□□□□ -1.23
SYNPO2-206ENST00000610556 TMEM120BA0PK00 339 aa7.34□□□□□ -1.23
SYNPO2-206ENST00000610556 M0R2N6 131 aa7.34□□□□□ -1.23
SYNPO2-206ENST00000610556 YWHABP31946 246 aaKnown RBP7.34□□□□□ -1.23
SYNPO2-206ENST00000610556 SREBF1P36956 1147 aa7.34□□□□□ -1.23
SYNPO2-206ENST00000610556 BPIFB4P59827 614 aa7.34□□□□□ -1.23
SYNPO2-206ENST00000610556 SKOR1P84550 965 aa7.34□□□□□ -1.23
SYNPO2-206ENST00000610556 PPP2R5AQ15172 486 aa7.34□□□□□ -1.23
SYNPO2-206ENST00000610556 ZNF720Q7Z2F6 126 aa7.34□□□□□ -1.23
SYNPO2-206ENST00000610556 CBWD2Q8IUF1 395 aa7.34□□□□□ -1.23
SYNPO2-206ENST00000610556 NIM1KQ8IY84 436 aa7.34□□□□□ -1.23
SYNPO2-206ENST00000610556 CERS5Q8N5B7 392 aa7.34□□□□□ -1.23
SYNPO2-206ENST00000610556 FBXL13Q8NEE6 735 aa7.34□□□□□ -1.23
SYNPO2-206ENST00000610556 RBM46Q8TBY0 533 aaKnown RBP7.34□□□□□ -1.23
SYNPO2-206ENST00000610556 VTI1AQ96AJ9 217 aa7.34□□□□□ -1.23
SYNPO2-206ENST00000610556 KCTD10Q9H3F6 313 aa7.34□□□□□ -1.23
SYNPO2-206ENST00000610556 UNC45AQ9H3U1 944 aa7.34□□□□□ -1.23
SYNPO2-206ENST00000610556 GABBR1Q9UBS5 961 aa7.34□□□□□ -1.23
SYNPO2-206ENST00000610556 TRPC6Q9Y210 931 aa7.34□□□□□ -1.23
SYNPO2-206ENST00000610556 C5P01031 1676 aa7.34□□□□□ -1.23
SYNPO2-206ENST00000610556 MYO3BQ8WXR4 1341 aa7.34□□□□□ -1.24
SYNPO2-206ENST00000610556 RGPD5Q99666 1765 aa7.34□□□□□ -1.24
SYNPO2-206ENST00000610556 TROVE2P10155 538 aaKnown RBP eCLIP7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 TM4SF1P30408 202 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 ACOT2P49753 483 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 YWHAGP61981 247 aaKnown RBP eCLIP7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 SNRNP35Q16560 246 aaKnown RBP7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 SEPT14Q6ZU15 432 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 ARHGAP27Q6ZUM4 889 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 KIRREL3Q8IZU9 778 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 SUPT20HQ8NEM7 779 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 DHX38Q92620 1227 aaKnown RBP7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 PRMT6Q96LA8 375 aaPredicted RBP7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 CALN1Q9BXU9 219 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 TMEM117Q9H0C3 514 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 ECT2Q9H8V3 914 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 ZWILCHQ9H900 591 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 SUGT1Q9Y2Z0 365 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 WNK3Q9BYP7 1800 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 SHANK3Q9BYB0 1731 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 CCT8L1PA6NM43 557 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 MEIS2O14770 477 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 CALCAP01258 141 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms