RNA–Protein interactions for RNA: ENST00000610535.4

TNIP1-220, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 5 BASIC

Gene TNIP1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-220ENST00000610535 ACP6Q9NPH0 428 aa18.22■□□□□ 0.51
TNIP1-220ENST00000610535 CTNNAL1Q9UBT7 734 aa18.22■□□□□ 0.51
TNIP1-220ENST00000610535 PNMA3Q9UL41 463 aa18.22■□□□□ 0.51
TNIP1-220ENST00000610535 USP15Q9Y4E8 981 aaPredicted RBP18.22■□□□□ 0.51
TNIP1-220ENST00000610535 PFASO15067 1338 aa18.22■□□□□ 0.51
TNIP1-220ENST00000610535 TMEM120BA0PK00 339 aa18.22■□□□□ 0.51
TNIP1-220ENST00000610535 MIF4GDA9UHW6 222 aaKnown RBP18.22■□□□□ 0.51
TNIP1-220ENST00000610535 ALAS1P13196 640 aa18.22■□□□□ 0.51
TNIP1-220ENST00000610535 GYS1P13807 737 aa18.22■□□□□ 0.51
TNIP1-220ENST00000610535 GAP43P17677 238 aa18.22■□□□□ 0.51
TNIP1-220ENST00000610535 ZNF76P36508 570 aa18.22■□□□□ 0.51
TNIP1-220ENST00000610535 SLMAPQ14BN4 828 aa18.22■□□□□ 0.51
TNIP1-220ENST00000610535 NUGGCQ68CJ6 796 aa18.22■□□□□ 0.51
TNIP1-220ENST00000610535 TAOK1Q7L7X3 1001 aa18.22■□□□□ 0.51
TNIP1-220ENST00000610535 ARHGEF2Q92974 986 aaKnown RBP18.22■□□□□ 0.51
TNIP1-220ENST00000610535 FIZ1Q96SL8 496 aa18.22■□□□□ 0.51
TNIP1-220ENST00000610535 PARP2Q9UGN5 583 aa18.22■□□□□ 0.51
TNIP1-220ENST00000610535 EIF3DO15371 548 aaKnown RBP eCLIP18.21■□□□□ 0.51
TNIP1-220ENST00000610535 NFIAQ12857 509 aa18.21■□□□□ 0.51
TNIP1-220ENST00000610535 HS2ST1Q7LGA3 356 aa18.21■□□□□ 0.51
TNIP1-220ENST00000610535 ZNF720Q7Z2F6 126 aa18.21■□□□□ 0.51
TNIP1-220ENST00000610535 ARHGEF19Q8IW93 802 aa18.21■□□□□ 0.51
TNIP1-220ENST00000610535 RPUSD2Q8IZ73 545 aaKnown RBP18.21■□□□□ 0.51
TNIP1-220ENST00000610535 LMO3Q8TAP4 145 aa18.21■□□□□ 0.51
TNIP1-220ENST00000610535 DYDC2Q96IM9 177 aa18.21■□□□□ 0.51
TNIP1-220ENST00000610535 FAXDC2Q96IV6 333 aa18.21■□□□□ 0.51
TNIP1-220ENST00000610535 POLR3CQ9BUI4 534 aaPredicted RBP18.21■□□□□ 0.51
TNIP1-220ENST00000610535 PARVGQ9HBI0 331 aa18.21■□□□□ 0.51
TNIP1-220ENST00000610535 DNAJC17Q9NVM6 304 aaKnown RBP18.21■□□□□ 0.51
TNIP1-220ENST00000610535 TRIM33Q9UPN9 1127 aa18.21■□□□□ 0.51
TNIP1-220ENST00000610535 COL24A1Q17RW2 1714 aa18.21■□□□□ 0.51
TNIP1-220ENST00000610535 EXOC3O60645 756 aa18.21■□□□□ 0.5
TNIP1-220ENST00000610535 SLITRK3O94933 977 aa18.21■□□□□ 0.5
TNIP1-220ENST00000610535 OAS1P00973 400 aaKnown RBP18.21■□□□□ 0.5
TNIP1-220ENST00000610535 GPC5P78333 572 aa18.21■□□□□ 0.5
TNIP1-220ENST00000610535 SEL1L2Q5TEA6 688 aa18.21■□□□□ 0.5
TNIP1-220ENST00000610535 C11orf63Q6NUN7 778 aa18.21■□□□□ 0.5
TNIP1-220ENST00000610535 CERS5Q8N5B7 392 aa18.21■□□□□ 0.5
TNIP1-220ENST00000610535 GDAP1Q8TB36 358 aa18.21■□□□□ 0.5
TNIP1-220ENST00000610535 RSRC1Q96IZ7 334 aaKnown RBP18.21■□□□□ 0.5
TNIP1-220ENST00000610535 CRAMP1Q96RY5 1269 aa18.21■□□□□ 0.5
TNIP1-220ENST00000610535 PCDHB18PQ96TA0 734 aa18.21■□□□□ 0.5
TNIP1-220ENST00000610535 HSD17B14Q9BPX1 270 aa18.21■□□□□ 0.5
TNIP1-220ENST00000610535 MKNK1Q9BUB5 465 aa18.21■□□□□ 0.5
TNIP1-220ENST00000610535 STMN4Q9H169 189 aaPredicted RBP18.21■□□□□ 0.5
TNIP1-220ENST00000610535 CDC42EP4Q9H3Q1 356 aaKnown RBP18.21■□□□□ 0.5
TNIP1-220ENST00000610535 KCNK9Q9NPC2 374 aa18.21■□□□□ 0.5
TNIP1-220ENST00000610535 STK38LQ9Y2H1 464 aa18.21■□□□□ 0.5
TNIP1-220ENST00000610535 GH1P01241 217 aa18.2■□□□□ 0.5
TNIP1-220ENST00000610535 KRT16P08779 473 aa18.2■□□□□ 0.5
TNIP1-220ENST00000610535 HSPA6P17066 643 aa18.2■□□□□ 0.5
TNIP1-220ENST00000610535 SREBF1P36956 1147 aa18.2■□□□□ 0.5
TNIP1-220ENST00000610535 MPP2Q14168 576 aa18.2■□□□□ 0.5
TNIP1-220ENST00000610535 CLUL1Q15846 466 aa18.2■□□□□ 0.5
TNIP1-220ENST00000610535 FAM178BQ8IXR5 827 aa18.2■□□□□ 0.5
TNIP1-220ENST00000610535 SPICE1Q8N0Z3 855 aa18.2■□□□□ 0.5
TNIP1-220ENST00000610535 KAT5Q92993 513 aa18.2■□□□□ 0.5
TNIP1-220ENST00000610535 L3MBTL3Q96JM7 780 aaPredicted RBP18.2■□□□□ 0.5
TNIP1-220ENST00000610535 QTRT2Q9H974 415 aaKnown RBP18.2■□□□□ 0.5
TNIP1-220ENST00000610535 HOMER3Q9NSC5 361 aa18.2■□□□□ 0.5
TNIP1-220ENST00000610535 DMAC2Q9NW81 257 aa18.2■□□□□ 0.5
TNIP1-220ENST00000610535 ZNF219Q9P2Y4 722 aaPredicted RBP18.2■□□□□ 0.5
TNIP1-220ENST00000610535 C15orf41Q9Y2V0 281 aa18.2■□□□□ 0.5
TNIP1-220ENST00000610535 RTN2O75298 545 aa18.2■□□□□ 0.5
TNIP1-220ENST00000610535 ZKSCAN8Q15776 578 aaPredicted RBP18.2■□□□□ 0.5
TNIP1-220ENST00000610535 GALNTL6Q49A17 601 aa18.2■□□□□ 0.5
TNIP1-220ENST00000610535 VSTM1Q6UX27 236 aa18.2■□□□□ 0.5
TNIP1-220ENST00000610535 SLC13A5Q86YT5 568 aaPredicted RBP18.2■□□□□ 0.5
TNIP1-220ENST00000610535 KLHL29Q96CT2 875 aa18.2■□□□□ 0.5
TNIP1-220ENST00000610535 AMNQ9BXJ7 453 aa18.2■□□□□ 0.5
TNIP1-220ENST00000610535 PCIF1Q9H4Z3 704 aa18.2■□□□□ 0.5
TNIP1-220ENST00000610535 DNAJC18Q9H819 358 aa18.2■□□□□ 0.5
TNIP1-220ENST00000610535 AAASQ9NRG9 546 aa18.2■□□□□ 0.5
TNIP1-220ENST00000610535 TISP43B9A030 160 aa18.19■□□□□ 0.5
TNIP1-220ENST00000610535 TP73O15350 636 aa18.19■□□□□ 0.5
TNIP1-220ENST00000610535 MYCNP04198 464 aaPredicted RBP18.19■□□□□ 0.5
TNIP1-220ENST00000610535 HADHBP55084 474 aaKnown RBP18.19■□□□□ 0.5
TNIP1-220ENST00000610535 BFSP1Q12934 665 aa18.19■□□□□ 0.5
TNIP1-220ENST00000610535 IKQ13123 557 aaPredicted RBP18.19■□□□□ 0.5
TNIP1-220ENST00000610535 SNX1Q13596 522 aa18.19■□□□□ 0.5
TNIP1-220ENST00000610535 MFSD5Q6N075 450 aa18.19■□□□□ 0.5
TNIP1-220ENST00000610535 CROCCP2Q86T23 111 aa18.19■□□□□ 0.5
TNIP1-220ENST00000610535 CHKAP35790 457 aa18.19■□□□□ 0.5
TNIP1-220ENST00000610535 CACNB3P54284 484 aa18.19■□□□□ 0.5
TNIP1-220ENST00000610535 MAP2K1Q02750 393 aaPredicted RBP18.19■□□□□ 0.5
TNIP1-220ENST00000610535 ADCY1Q08828 1119 aa18.19■□□□□ 0.5
TNIP1-220ENST00000610535 PPP2R5AQ15172 486 aa18.19■□□□□ 0.5
TNIP1-220ENST00000610535 SIX1Q15475 284 aaPredicted RBP18.19■□□□□ 0.5
TNIP1-220ENST00000610535 ODR4Q5SWX8 454 aa18.19■□□□□ 0.5
TNIP1-220ENST00000610535 FITM2Q8N6M3 262 aa18.19■□□□□ 0.5
TNIP1-220ENST00000610535 C1orf54Q8WWF1 131 aa18.19■□□□□ 0.5
TNIP1-220ENST00000610535 TAOK3Q9H2K8 898 aa18.19■□□□□ 0.5
TNIP1-220ENST00000610535 DIAPH2O60879 1101 aa18.18■□□□□ 0.5
TNIP1-220ENST00000610535 SUN1O94901 812 aa18.18■□□□□ 0.5
TNIP1-220ENST00000610535 SGPL1O95470 568 aa18.18■□□□□ 0.5
TNIP1-220ENST00000610535 GBP1P32455 592 aa18.18■□□□□ 0.5
TNIP1-220ENST00000610535 COPS2P61201 443 aa18.18■□□□□ 0.5
TNIP1-220ENST00000610535 BNIP1Q12981 228 aa18.18■□□□□ 0.5
TNIP1-220ENST00000610535 CDC42EP5Q6NZY7 148 aa18.18■□□□□ 0.5
TNIP1-220ENST00000610535 FBXO11Q86XK2 927 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms