RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 TMEM120BA0PK00 339 aa21.94■■□□□ 1.1
SSBP3-216ENST00000610401 GYS1P13807 737 aa21.94■■□□□ 1.1
SSBP3-216ENST00000610401 GSCP56915 257 aaPredicted RBP21.94■■□□□ 1.1
SSBP3-216ENST00000610401 RBM26Q5T8P6 1007 aaKnown RBP21.94■■□□□ 1.1
SSBP3-216ENST00000610401 ARHGAP27Q6ZUM4 889 aa21.94■■□□□ 1.1
SSBP3-216ENST00000610401 C1orf186Q6ZWK4 172 aa21.94■■□□□ 1.1
SSBP3-216ENST00000610401 TRPM8Q7Z2W7 1104 aa21.94■■□□□ 1.1
SSBP3-216ENST00000610401 ZNF577Q9BSK1 485 aa21.94■■□□□ 1.1
SSBP3-216ENST00000610401 CLRN2A0PK11 232 aa21.93■■□□□ 1.1
SSBP3-216ENST00000610401 ATP6V1G2O95670 118 aa21.93■■□□□ 1.1
SSBP3-216ENST00000610401 SH3BP5LQ7L8J4 393 aa21.93■■□□□ 1.1
SSBP3-216ENST00000610401 OTOP1Q7RTM1 612 aa21.93■■□□□ 1.1
SSBP3-216ENST00000610401 SRRM1Q8IYB3 904 aaKnown RBP21.93■■□□□ 1.1
SSBP3-216ENST00000610401 USTQ9Y2C2 406 aa21.93■■□□□ 1.1
SSBP3-216ENST00000610401 CES2O00748 559 aa21.93■■□□□ 1.1
SSBP3-216ENST00000610401 RIPK2O43353 540 aa21.93■■□□□ 1.1
SSBP3-216ENST00000610401 BMP3P12645 472 aa21.93■■□□□ 1.1
SSBP3-216ENST00000610401 NOVP48745 357 aa21.93■■□□□ 1.1
SSBP3-216ENST00000610401 EMC10Q5UCC4 262 aa21.93■■□□□ 1.1
SSBP3-216ENST00000610401 NOP9Q86U38 636 aaKnown RBP21.93■■□□□ 1.1
SSBP3-216ENST00000610401 EXOC3L1Q86VI1 746 aa21.93■■□□□ 1.1
SSBP3-216ENST00000610401 BORCS6Q96GS4 357 aa21.93■■□□□ 1.1
SSBP3-216ENST00000610401 CHST7Q9NS84 486 aa21.93■■□□□ 1.1
SSBP3-216ENST00000610401 CEP83Q9Y592 693 aa21.93■■□□□ 1.1
SSBP3-216ENST00000610401 TOM1O60784 492 aa21.93■■□□□ 1.1
SSBP3-216ENST00000610401 PHF2O75151 1096 aa21.93■■□□□ 1.1
SSBP3-216ENST00000610401 PAX7P23759 505 aa21.93■■□□□ 1.1
SSBP3-216ENST00000610401 RNASELQ05823 741 aaKnown RBP21.93■■□□□ 1.1
SSBP3-216ENST00000610401 DDR1Q08345 913 aa21.93■■□□□ 1.1
SSBP3-216ENST00000610401 RRP1BQ14684 758 aaKnown RBP21.93■■□□□ 1.1
SSBP3-216ENST00000610401 NAP1L3Q99457 506 aaPredicted RBP21.93■■□□□ 1.1
SSBP3-216ENST00000610401 CDC42EP4Q9H3Q1 356 aaKnown RBP21.93■■□□□ 1.1
SSBP3-216ENST00000610401 VEZTQ9HBM0 779 aa21.93■■□□□ 1.1
SSBP3-216ENST00000610401 PRR12Q9ULL5 1215 aa21.93■■□□□ 1.1
SSBP3-216ENST00000610401 TCP10L2B9ZVM9 353 aa21.92■■□□□ 1.1
SSBP3-216ENST00000610401 SPAG7O75391 227 aa21.92■■□□□ 1.1
SSBP3-216ENST00000610401 CYP3A4P08684 503 aa21.92■■□□□ 1.1
SSBP3-216ENST00000610401 AUHQ13825 339 aaKnown RBP21.92■■□□□ 1.1
SSBP3-216ENST00000610401 RNF207Q6ZRF8 634 aa21.92■■□□□ 1.1
SSBP3-216ENST00000610401 ZC3H3Q8IXZ2 948 aaKnown RBP21.92■■□□□ 1.1
SSBP3-216ENST00000610401 CPXCR1Q8N123 301 aa21.92■■□□□ 1.1
SSBP3-216ENST00000610401 ZSWIM1Q9BR11 485 aa21.92■■□□□ 1.1
SSBP3-216ENST00000610401 UNC45AQ9H3U1 944 aa21.92■■□□□ 1.1
SSBP3-216ENST00000610401 O00370 1275 aa21.92■■□□□ 1.1
SSBP3-216ENST00000610401 SLC16A4O15374 487 aa21.92■■□□□ 1.1
SSBP3-216ENST00000610401 GPC5P78333 572 aa21.92■■□□□ 1.1
SSBP3-216ENST00000610401 ZNF564Q8TBZ8 553 aaPredicted RBP21.92■■□□□ 1.1
SSBP3-216ENST00000610401 MYBL1P10243 752 aa21.91■■□□□ 1.1
SSBP3-216ENST00000610401 BCRP11274 1271 aa21.91■■□□□ 1.1
SSBP3-216ENST00000610401 SREBF1P36956 1147 aa21.91■■□□□ 1.1
SSBP3-216ENST00000610401 PTGIRP43119 386 aa21.91■■□□□ 1.1
SSBP3-216ENST00000610401 EIF3BP55884 814 aaKnown RBP21.91■■□□□ 1.1
SSBP3-216ENST00000610401 KRT17Q04695 432 aa21.91■■□□□ 1.1
SSBP3-216ENST00000610401 SGO2Q562F6 1265 aa21.91■■□□□ 1.1
SSBP3-216ENST00000610401 MIGA2Q7L4E1 593 aa21.91■■□□□ 1.1
SSBP3-216ENST00000610401 PASD1Q8IV76 773 aa21.91■■□□□ 1.1
SSBP3-216ENST00000610401 ECT2Q9H8V3 914 aa21.91■■□□□ 1.1
SSBP3-216ENST00000610401 CNOT10Q9H9A5 744 aaKnown RBP21.91■■□□□ 1.1
SSBP3-216ENST00000610401 PFASO15067 1338 aa21.91■■□□□ 1.1
SSBP3-216ENST00000610401 A0A0A6YYK5 440 aaPredicted RBP21.91■■□□□ 1.1
SSBP3-216ENST00000610401 IGF2BP3O00425 579 aaKnown RBP eCLIP21.91■■□□□ 1.1
SSBP3-216ENST00000610401 GJB6O95452 261 aa21.91■■□□□ 1.1
SSBP3-216ENST00000610401 PREPLQ4J6C6 727 aaPredicted RBP21.91■■□□□ 1.1
SSBP3-216ENST00000610401 RC3H1Q5TC82 1133 aaKnown RBP21.91■■□□□ 1.1
SSBP3-216ENST00000610401 NSMCE1Q8WV22 266 aa21.91■■□□□ 1.1
SSBP3-216ENST00000610401 HSD17B14Q9BPX1 270 aa21.91■■□□□ 1.1
SSBP3-216ENST00000610401 TNRC6CQ9HCJ0 1690 aaKnown RBP21.91■■□□□ 1.1
SSBP3-216ENST00000610401 SLC16A3O15427 465 aaKnown RBP21.91■■□□□ 1.1
SSBP3-216ENST00000610401 MMP13P45452 471 aa21.91■■□□□ 1.1
SSBP3-216ENST00000610401 FAM20AQ96MK3 541 aa21.91■■□□□ 1.1
SSBP3-216ENST00000610401 MCM8Q9UJA3 840 aa21.91■■□□□ 1.1
SSBP3-216ENST00000610401 CYP3A7-CYP3A51PA0A087WV96 503 aa21.9■■□□□ 1.1
SSBP3-216ENST00000610401 BBOX1O75936 387 aa21.9■■□□□ 1.1
SSBP3-216ENST00000610401 CYP3A7P24462 503 aa21.9■■□□□ 1.1
SSBP3-216ENST00000610401 AP3B2Q13367 1082 aa21.9■■□□□ 1.1
SSBP3-216ENST00000610401 KAZNQ674X7 775 aa21.9■■□□□ 1.1
SSBP3-216ENST00000610401 CPA5Q8WXQ8 436 aa21.9■■□□□ 1.1
SSBP3-216ENST00000610401 KLHL29Q96CT2 875 aa21.9■■□□□ 1.1
SSBP3-216ENST00000610401 FAM167BQ9BTA0 163 aa21.9■■□□□ 1.1
SSBP3-216ENST00000610401 PAGR1Q9BTK6 254 aa21.9■■□□□ 1.1
SSBP3-216ENST00000610401 PPIP5K2O43314 1243 aa21.9■■□□□ 1.1
SSBP3-216ENST00000610401 NEBLO76041 1014 aa21.9■■□□□ 1.1
SSBP3-216ENST00000610401 COILP38432 576 aaPredicted RBP21.9■■□□□ 1.1
SSBP3-216ENST00000610401 ADCY8P40145 1251 aa21.9■■□□□ 1.1
SSBP3-216ENST00000610401 VAMP7P51809 220 aa21.9■■□□□ 1.1
SSBP3-216ENST00000610401 PEX3P56589 373 aa21.9■■□□□ 1.1
SSBP3-216ENST00000610401 CBWD2Q8IUF1 395 aa21.9■■□□□ 1.1
SSBP3-216ENST00000610401 CYP4X1Q8N118 509 aa21.9■■□□□ 1.1
SSBP3-216ENST00000610401 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.9■■□□□ 1.11e-9■■■■■ 83.4
SSBP3-216ENST00000610401 FAM198AQ9UFP1 575 aa21.9■■□□□ 1.1
SSBP3-216ENST00000610401 TTC7AQ9ULT0 858 aaPredicted RBP21.9■■□□□ 1.1
SSBP3-216ENST00000610401 NENFQ9UMX5 172 aa21.9■■□□□ 1.1
SSBP3-216ENST00000610401 PLEKHO2Q8TD55 490 aa21.89■■□□□ 1.1
SSBP3-216ENST00000610401 AGAP11Q8TF27 550 aa21.89■■□□□ 1.1
SSBP3-216ENST00000610401 SPOCK2Q92563 424 aa21.89■■□□□ 1.1
SSBP3-216ENST00000610401 NAP1L4Q99733 375 aaKnown RBP21.89■■□□□ 1.1
SSBP3-216ENST00000610401 LAMB2P55268 1798 aa21.89■■□□□ 1.09
SSBP3-216ENST00000610401 THAP12O43422 761 aa21.89■■□□□ 1.09
SSBP3-216ENST00000610401 DIAPH2O60879 1101 aa21.89■■□□□ 1.09
SSBP3-216ENST00000610401 MPP2Q14168 576 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms