RNA–Protein interactions for RNA: ENST00000610288.4

COL25A1-208, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL25A1, Length 4,799 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-208ENST00000610288 PHF2O75151 1096 aa9.7□□□□□ -0.86
COL25A1-208ENST00000610288 USP11P51784 963 aa9.7□□□□□ -0.86
COL25A1-208ENST00000610288 RASSF3Q86WH2 238 aa9.7□□□□□ -0.86
COL25A1-208ENST00000610288 ZNF564Q8TBZ8 553 aaPredicted RBP9.7□□□□□ -0.86
COL25A1-208ENST00000610288 RAPGEF5Q92565 580 aa9.7□□□□□ -0.86
COL25A1-208ENST00000610288 SYN2Q92777 582 aaPredicted RBP9.7□□□□□ -0.86
COL25A1-208ENST00000610288 ZKSCAN4Q969J2 545 aaPredicted RBP9.7□□□□□ -0.86
COL25A1-208ENST00000610288 C7orf25Q9BPX7 421 aa9.7□□□□□ -0.86
COL25A1-208ENST00000610288 BHMT2Q9H2M3 363 aa9.7□□□□□ -0.86
COL25A1-208ENST00000610288 TMBIM4Q9HC24 238 aa9.7□□□□□ -0.86
COL25A1-208ENST00000610288 TRAF3IP3Q9Y228 551 aa9.7□□□□□ -0.86
COL25A1-208ENST00000610288 SYNJ2BP-COX16A0A087WUM0 186 aa9.7□□□□□ -0.86
COL25A1-208ENST00000610288 POTEMA6NI47 508 aa9.7□□□□□ -0.86
COL25A1-208ENST00000610288 PSMC1P62191 440 aaKnown RBP9.7□□□□□ -0.86
COL25A1-208ENST00000610288 CDK17Q00537 523 aa9.7□□□□□ -0.86
COL25A1-208ENST00000610288 IFRD2Q12894 506 aaPredicted RBP9.7□□□□□ -0.86
COL25A1-208ENST00000610288 FIGNQ5HY92 759 aa9.7□□□□□ -0.86
COL25A1-208ENST00000610288 JADE1Q6IE81 842 aa9.7□□□□□ -0.86
COL25A1-208ENST00000610288 COL23A1Q86Y22 540 aaPredicted RBP9.7□□□□□ -0.86
COL25A1-208ENST00000610288 CDHR1Q96JP9 859 aa9.7□□□□□ -0.86
COL25A1-208ENST00000610288 ERP44Q9BS26 406 aa9.7□□□□□ -0.86
COL25A1-208ENST00000610288 TRIM51Q9BSJ1 452 aa9.7□□□□□ -0.86
COL25A1-208ENST00000610288 FAM129AQ9BZQ8 928 aa9.7□□□□□ -0.86
COL25A1-208ENST00000610288 WWP1Q9H0M0 922 aa9.7□□□□□ -0.86
COL25A1-208ENST00000610288 PPCSQ9HAB8 311 aa9.7□□□□□ -0.86
COL25A1-208ENST00000610288 COX16Q9P0S2 106 aa9.7□□□□□ -0.86
COL25A1-208ENST00000610288 DKK3Q9UBP4 350 aa9.7□□□□□ -0.86
COL25A1-208ENST00000610288 NRKQ7Z2Y5 1582 aa9.7□□□□□ -0.86
COL25A1-208ENST00000610288 GSG1L2A8MUP6 293 aa9.7□□□□□ -0.86
COL25A1-208ENST00000610288 FTLP02792 175 aaPredicted RBP9.7□□□□□ -0.86
COL25A1-208ENST00000610288 ZNF18P17022 549 aa9.7□□□□□ -0.86
COL25A1-208ENST00000610288 HOXA13P31271 388 aaPredicted RBP9.7□□□□□ -0.86
COL25A1-208ENST00000610288 BLVRAP53004 296 aa9.7□□□□□ -0.86
COL25A1-208ENST00000610288 DALRD3Q5D0E6 543 aaKnown RBP9.7□□□□□ -0.86
COL25A1-208ENST00000610288 RSBN1LQ6PCB5 846 aaPredicted RBP9.7□□□□□ -0.86
COL25A1-208ENST00000610288 DARS2Q6PI48 645 aaKnown RBP9.7□□□□□ -0.86
COL25A1-208ENST00000610288 FOXP4Q8IVH2 680 aaPredicted RBP9.7□□□□□ -0.86
COL25A1-208ENST00000610288 GLYCTKQ8IVS8 523 aa9.7□□□□□ -0.86
COL25A1-208ENST00000610288 ATP11CQ8NB49 1132 aa9.7□□□□□ -0.86
COL25A1-208ENST00000610288 CATSPER1Q8NEC5 780 aa9.7□□□□□ -0.86
COL25A1-208ENST00000610288 USP33Q8TEY7 942 aa9.7□□□□□ -0.86
COL25A1-208ENST00000610288 ZNF277Q9NRM2 450 aaPredicted RBP9.7□□□□□ -0.86
COL25A1-208ENST00000610288 A6NJR5 290 aa9.7□□□□□ -0.86
COL25A1-208ENST00000610288 GOLGA8SH3BPF8 625 aa9.7□□□□□ -0.86
COL25A1-208ENST00000610288 CFLARO15519 480 aa9.7□□□□□ -0.86
COL25A1-208ENST00000610288 KRT4P19013 534 aa9.7□□□□□ -0.86
COL25A1-208ENST00000610288 ITIH2P19823 946 aa9.7□□□□□ -0.86
COL25A1-208ENST00000610288 VHLP40337 213 aa9.7□□□□□ -0.86
COL25A1-208ENST00000610288 EPHB1P54762 984 aa9.7□□□□□ -0.86
COL25A1-208ENST00000610288 EN1Q05925 392 aaPredicted RBP9.7□□□□□ -0.86
COL25A1-208ENST00000610288 CCDC15Q0P6D6 951 aa9.7□□□□□ -0.86
COL25A1-208ENST00000610288 TRIM74Q86UV6 250 aa9.7□□□□□ -0.86
COL25A1-208ENST00000610288 TRIM73Q86UV7 250 aa9.7□□□□□ -0.86
COL25A1-208ENST00000610288 SFR1Q86XK3 245 aa9.7□□□□□ -0.86
COL25A1-208ENST00000610288 KIF2BQ8N4N8 673 aa9.7□□□□□ -0.86
COL25A1-208ENST00000610288 SH3RF3Q8TEJ3 882 aaPredicted RBP9.7□□□□□ -0.86
COL25A1-208ENST00000610288 NAF1Q96HR8 494 aaKnown RBP9.7□□□□□ -0.86
COL25A1-208ENST00000610288 APOL6Q9BWW8 343 aa9.7□□□□□ -0.86
COL25A1-208ENST00000610288 FOXP3Q9BZS1 431 aa9.7□□□□□ -0.86
COL25A1-208ENST00000610288 NDEL1Q9GZM8 345 aa9.7□□□□□ -0.86
COL25A1-208ENST00000610288 COA1Q9GZY4 146 aa9.7□□□□□ -0.86
COL25A1-208ENST00000610288 TRABDQ9H4I3 376 aa9.7□□□□□ -0.86
COL25A1-208ENST00000610288 SMYD3Q9H7B4 428 aa9.7□□□□□ -0.86
COL25A1-208ENST00000610288 MRPL40Q9NQ50 206 aaKnown RBP9.7□□□□□ -0.86
COL25A1-208ENST00000610288 ARIH1Q9Y4X5 557 aaPredicted RBP9.7□□□□□ -0.86
COL25A1-208ENST00000610288 TMEM120BA0PK00 339 aa9.69□□□□□ -0.86
COL25A1-208ENST00000610288 PALM3A6NDB9 673 aaPredicted RBP9.69□□□□□ -0.86
COL25A1-208ENST00000610288 FAM47DPA6NHR8 397 aa9.69□□□□□ -0.86
COL25A1-208ENST00000610288 TLR3O15455 904 aaKnown RBP9.69□□□□□ -0.86
COL25A1-208ENST00000610288 ABL1P00519 1130 aa9.69□□□□□ -0.86
COL25A1-208ENST00000610288 HSPA8P11142 646 aaKnown RBP9.69□□□□□ -0.86
COL25A1-208ENST00000610288 VCAM1P19320 739 aa9.69□□□□□ -0.86
COL25A1-208ENST00000610288 SOX5P35711 763 aa9.69□□□□□ -0.86
COL25A1-208ENST00000610288 ECE1P42892 770 aa9.69□□□□□ -0.86
COL25A1-208ENST00000610288 KPNA2P52292 529 aaKnown RBP9.69□□□□□ -0.86
COL25A1-208ENST00000610288 ANTXR2P58335 489 aa9.69□□□□□ -0.86
COL25A1-208ENST00000610288 MRPS15P82914 257 aaKnown RBP9.69□□□□□ -0.86
COL25A1-208ENST00000610288 DNAL1Q4LDG9 190 aa9.69□□□□□ -0.86
COL25A1-208ENST00000610288 DAB2IPQ5VWQ8 1189 aa9.69□□□□□ -0.86
COL25A1-208ENST00000610288 MRPL46Q9H2W6 279 aaKnown RBP9.69□□□□□ -0.86
COL25A1-208ENST00000610288 BARHL2Q9NY43 387 aa9.69□□□□□ -0.86
COL25A1-208ENST00000610288 INO80Q9ULG1 1556 aaPredicted RBP9.69□□□□□ -0.86
COL25A1-208ENST00000610288 SPATA31A3Q5VYP0 1347 aa9.69□□□□□ -0.86
COL25A1-208ENST00000610288 HECW2Q9P2P5 1572 aa9.69□□□□□ -0.86
COL25A1-208ENST00000610288 MYCP01106 439 aaPredicted RBP9.69□□□□□ -0.86
COL25A1-208ENST00000610288 KRT8P05787 483 aa9.69□□□□□ -0.86
COL25A1-208ENST00000610288 MCF2P10911 925 aa9.69□□□□□ -0.86
COL25A1-208ENST00000610288 KCNA4P22459 653 aa9.69□□□□□ -0.86
COL25A1-208ENST00000610288 DYNLT1P63172 113 aa9.69□□□□□ -0.86
COL25A1-208ENST00000610288 TFAMQ00059 246 aaKnown RBP9.69□□□□□ -0.86
COL25A1-208ENST00000610288 RABGAP1LQ5R372 815 aa9.69□□□□□ -0.86
COL25A1-208ENST00000610288 RARS2Q5T160 578 aaKnown RBP9.69□□□□□ -0.86
COL25A1-208ENST00000610288 TEDDM1Q5T9Z0 273 aa9.69□□□□□ -0.86
COL25A1-208ENST00000610288 IZUMO3Q5VZ72 239 aa9.69□□□□□ -0.86
COL25A1-208ENST00000610288 JAMLQ86YT9 394 aa9.69□□□□□ -0.86
COL25A1-208ENST00000610288 CASKIN2Q8WXE0 1202 aa9.69□□□□□ -0.86
COL25A1-208ENST00000610288 FAM149B1Q96BN6 582 aa9.69□□□□□ -0.86
COL25A1-208ENST00000610288 ANKRD36BP1Q96IX9 119 aa9.69□□□□□ -0.86
COL25A1-208ENST00000610288 NR1H4Q96RI1 486 aaPredicted RBP9.69□□□□□ -0.86
COL25A1-208ENST00000610288 SH3GL2Q99962 352 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms