RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 TRIM7Q9C029 511 aa24.02■■□□□ 1.44
SHANK2-220ENST00000608988 TCP11X1B4DZS4 312 aa24.01■■□□□ 1.43
SHANK2-220ENST00000608988 ALDH5A1P51649 535 aaPredicted RBP24.01■■□□□ 1.43
SHANK2-220ENST00000608988 MAP2K1Q02750 393 aaPredicted RBP24.01■■□□□ 1.43
SHANK2-220ENST00000608988 ACVR2BQ13705 512 aa24.01■■□□□ 1.43
SHANK2-220ENST00000608988 RNF43Q68DV7 783 aa24.01■■□□□ 1.43
SHANK2-220ENST00000608988 PHLDB3Q6NSJ2 640 aa24.01■■□□□ 1.43
SHANK2-220ENST00000608988 MIGA2Q7L4E1 593 aa24.01■■□□□ 1.43
SHANK2-220ENST00000608988 AGAP11Q8TF27 550 aa24.01■■□□□ 1.43
SHANK2-220ENST00000608988 KLHL29Q96CT2 875 aa24.01■■□□□ 1.43
SHANK2-220ENST00000608988 UIMC1Q96RL1 719 aa24.01■■□□□ 1.43
SHANK2-220ENST00000608988 MTFR1LQ9H019 292 aa24.01■■□□□ 1.43
SHANK2-220ENST00000608988 DDX4Q9NQI0 724 aaKnown RBP24.01■■□□□ 1.43
SHANK2-220ENST00000608988 PRKAG3Q9UGI9 489 aa24.01■■□□□ 1.43
SHANK2-220ENST00000608988 MPHOSPH10O00566 681 aaKnown RBP24■■□□□ 1.43
SHANK2-220ENST00000608988 LACTBP83111 547 aaPredicted RBP24■■□□□ 1.43
SHANK2-220ENST00000608988 RRP1BQ14684 758 aaKnown RBP24■■□□□ 1.43
SHANK2-220ENST00000608988 SIX1Q15475 284 aaPredicted RBP24■■□□□ 1.43
SHANK2-220ENST00000608988 ARHGAP44Q17R89 818 aa24■■□□□ 1.43
SHANK2-220ENST00000608988 CRY2Q49AN0 593 aa24■■□□□ 1.43
SHANK2-220ENST00000608988 SLFN13Q68D06 897 aa24■■□□□ 1.43
SHANK2-220ENST00000608988 FBXO11Q86XK2 927 aa24■■□□□ 1.43
SHANK2-220ENST00000608988 ARHGEF1Q92888 912 aaKnown RBP24■■□□□ 1.43
SHANK2-220ENST00000608988 CNKSR1Q969H4 720 aa24■■□□□ 1.43
SHANK2-220ENST00000608988 RBM17Q96I25 401 aaKnown RBP24■■□□□ 1.43
SHANK2-220ENST00000608988 FAXDC2Q96IV6 333 aa24■■□□□ 1.43
SHANK2-220ENST00000608988 FIZ1Q96SL8 496 aa24■■□□□ 1.43
SHANK2-220ENST00000608988 CCDC113Q9H0I3 377 aa24■■□□□ 1.43
SHANK2-220ENST00000608988 DBR1Q9UK59 544 aaKnown RBP24■■□□□ 1.43
SHANK2-220ENST00000608988 ACTL7BQ9Y614 415 aa24■■□□□ 1.43
SHANK2-220ENST00000608988 TMEM120BA0PK00 339 aa24■■□□□ 1.43
SHANK2-220ENST00000608988 IGF2BP3O00425 579 aaKnown RBP eCLIP24■■□□□ 1.43
SHANK2-220ENST00000608988 PMM2O15305 246 aa24■■□□□ 1.43
SHANK2-220ENST00000608988 BBOX1O75936 387 aa24■■□□□ 1.43
SHANK2-220ENST00000608988 PDE6BP35913 854 aa24■■□□□ 1.43
SHANK2-220ENST00000608988 SLCO1A2P46721 670 aa24■■□□□ 1.43
SHANK2-220ENST00000608988 CYP4A11Q02928 519 aa24■■□□□ 1.43
SHANK2-220ENST00000608988 INTS8Q75QN2 995 aaKnown RBP24■■□□□ 1.43
SHANK2-220ENST00000608988 ASRGL1Q7L266 308 aa24■■□□□ 1.43
SHANK2-220ENST00000608988 PALB2Q86YC2 1186 aa24■■□□□ 1.43
SHANK2-220ENST00000608988 FAM178BQ8IXR5 827 aa24■■□□□ 1.43
SHANK2-220ENST00000608988 ZDHHC14Q8IZN3 488 aa24■■□□□ 1.43
SHANK2-220ENST00000608988 CDC42EP4Q9H3Q1 356 aaKnown RBP24■■□□□ 1.43
SHANK2-220ENST00000608988 UVRAGQ9P2Y5 699 aa24■■□□□ 1.43
SHANK2-220ENST00000608988 LGALS13Q9UHV8 139 aa24■■□□□ 1.43
SHANK2-220ENST00000608988 CYP1A2P05177 515 aa23.99■■□□□ 1.43
SHANK2-220ENST00000608988 PYGMP11217 842 aa23.99■■□□□ 1.43
SHANK2-220ENST00000608988 KCNJ2P63252 427 aa23.99■■□□□ 1.43
SHANK2-220ENST00000608988 ALCAMQ13740 583 aa23.99■■□□□ 1.43
SHANK2-220ENST00000608988 ZKSCAN8Q15776 578 aaPredicted RBP23.99■■□□□ 1.43
SHANK2-220ENST00000608988 RHBDF2Q6PJF5 856 aa23.99■■□□□ 1.43
SHANK2-220ENST00000608988 VSTM1Q6UX27 236 aa23.99■■□□□ 1.43
SHANK2-220ENST00000608988 RAB3IPQ96QF0 476 aaPredicted RBP23.99■■□□□ 1.43
SHANK2-220ENST00000608988 P2RX7Q99572 595 aaKnown RBP23.99■■□□□ 1.43
SHANK2-220ENST00000608988 FGFR1OP2Q9NVK5 253 aa23.99■■□□□ 1.43
SHANK2-220ENST00000608988 PIK3CDO00329 1044 aa23.98■■□□□ 1.43
SHANK2-220ENST00000608988 ATP5HO75947 161 aa23.98■■□□□ 1.43
SHANK2-220ENST00000608988 RPSAP08865 295 aaKnown RBP23.98■■□□□ 1.43
SHANK2-220ENST00000608988 TRIM49P0CI25 452 aa23.98■■□□□ 1.43
SHANK2-220ENST00000608988 TRIM49CP0CI26 452 aa23.98■■□□□ 1.43
SHANK2-220ENST00000608988 CCNB1P14635 433 aa23.98■■□□□ 1.43
SHANK2-220ENST00000608988 MARCKSL1P49006 195 aa23.98■■□□□ 1.43
SHANK2-220ENST00000608988 CYP2J2P51589 502 aa23.98■■□□□ 1.43
SHANK2-220ENST00000608988 RWDD2BP57060 319 aa23.98■■□□□ 1.43
SHANK2-220ENST00000608988 TRAF1Q13077 416 aa23.98■■□□□ 1.43
SHANK2-220ENST00000608988 PPP2R5CQ13362 524 aa23.98■■□□□ 1.43
SHANK2-220ENST00000608988 AADACL2Q6P093 401 aa23.98■■□□□ 1.43
SHANK2-220ENST00000608988 C7orf43Q8WVR3 580 aa23.98■■□□□ 1.43
SHANK2-220ENST00000608988 STRA6Q9BX79 667 aa23.98■■□□□ 1.43
SHANK2-220ENST00000608988 UBAP1LF5GYI3 381 aa23.98■■□□□ 1.43
SHANK2-220ENST00000608988 EML1O00423 815 aa23.98■■□□□ 1.43
SHANK2-220ENST00000608988 FSCN2O14926 492 aa23.98■■□□□ 1.43
SHANK2-220ENST00000608988 MAPK13O15264 365 aa23.98■■□□□ 1.43
SHANK2-220ENST00000608988 EXOC3O60645 756 aa23.98■■□□□ 1.43
SHANK2-220ENST00000608988 IBSPP21815 317 aaPredicted RBP23.98■■□□□ 1.43
SHANK2-220ENST00000608988 ATP11AP98196 1134 aa23.98■■□□□ 1.43
SHANK2-220ENST00000608988 MESDQ14696 234 aa23.98■■□□□ 1.43
SHANK2-220ENST00000608988 ZC2HC1CQ53FD0 456 aaPredicted RBP23.98■■□□□ 1.43
SHANK2-220ENST00000608988 RNF207Q6ZRF8 634 aa23.98■■□□□ 1.43
SHANK2-220ENST00000608988 ARHGEF18Q6ZSZ5 1173 aa23.98■■□□□ 1.43
SHANK2-220ENST00000608988 SMIM5Q71RC9 77 aa23.98■■□□□ 1.43
SHANK2-220ENST00000608988 RPUSD2Q8IZ73 545 aaKnown RBP23.98■■□□□ 1.43
SHANK2-220ENST00000608988 GRK7Q8WTQ7 553 aa23.98■■□□□ 1.43
SHANK2-220ENST00000608988 SLC20A1Q8WUM9 679 aa23.98■■□□□ 1.43
SHANK2-220ENST00000608988 MAGEB18Q96M61 343 aa23.98■■□□□ 1.43
SHANK2-220ENST00000608988 NACC1Q96RE7 527 aa23.98■■□□□ 1.43
SHANK2-220ENST00000608988 ZNF536O15090 1300 aa23.98■■□□□ 1.43
SHANK2-220ENST00000608988 LUC7L3O95232 432 aaKnown RBP23.97■■□□□ 1.43
SHANK2-220ENST00000608988 CALRP27797 417 aaKnown RBP23.97■■□□□ 1.43
SHANK2-220ENST00000608988 ZNF76P36508 570 aa23.97■■□□□ 1.43
SHANK2-220ENST00000608988 MSH2P43246 934 aa23.97■■□□□ 1.43
SHANK2-220ENST00000608988 PPP1R21Q6ZMI0 780 aa23.97■■□□□ 1.43
SHANK2-220ENST00000608988 CEP128Q6ZU80 1094 aa23.97■■□□□ 1.43
SHANK2-220ENST00000608988 C12orf56Q8IXR9 622 aa23.97■■□□□ 1.43
SHANK2-220ENST00000608988 ZNF622Q969S3 477 aaKnown RBP eCLIP23.97■■□□□ 1.43
SHANK2-220ENST00000608988 UBE2TQ9NPD8 197 aaPredicted RBP23.97■■□□□ 1.43
SHANK2-220ENST00000608988 CD2APQ9Y5K6 639 aa23.97■■□□□ 1.43
SHANK2-220ENST00000608988 LOXHD1Q8IVV2 1947 aa23.97■■□□□ 1.43
SHANK2-220ENST00000608988 TMEM110-MUSTN1A8MSY1 372 aa23.96■■□□□ 1.43
SHANK2-220ENST00000608988 SPOPO43791 374 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms