RNA–Protein interactions for RNA: ENST00000607814.5

CTSA-218, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-218ENST00000607814 NOL7Q9UMY1 257 aaKnown RBP15.16■□□□□ 0.02
CTSA-218ENST00000607814 DKC1O60832 514 aaKnown RBP eCLIP15.15■□□□□ 0.02
CTSA-218ENST00000607814 CDC25AP30304 524 aa15.15■□□□□ 0.02
CTSA-218ENST00000607814 ALDH7A1P49419 539 aaKnown RBP15.15■□□□□ 0.02
CTSA-218ENST00000607814 DNM2P50570 870 aa15.15■□□□□ 0.02
CTSA-218ENST00000607814 PTGDRQ13258 359 aa15.15■□□□□ 0.02
CTSA-218ENST00000607814 TDGQ13569 410 aa15.15■□□□□ 0.02
CTSA-218ENST00000607814 EMC2Q15006 297 aa15.15■□□□□ 0.02
CTSA-218ENST00000607814 ANGPT1Q15389 498 aa15.15■□□□□ 0.02
CTSA-218ENST00000607814 IL17AQ16552 155 aa15.15■□□□□ 0.02
CTSA-218ENST00000607814 ECM1Q16610 540 aa15.15■□□□□ 0.02
CTSA-218ENST00000607814 RARS2Q5T160 578 aaKnown RBP15.15■□□□□ 0.02
CTSA-218ENST00000607814 LARP1BQ659C4 914 aaKnown RBP15.15■□□□□ 0.02
CTSA-218ENST00000607814 POTEGQ6S5H5 508 aa15.15■□□□□ 0.02
CTSA-218ENST00000607814 OTUD6AQ7L8S5 288 aa15.15■□□□□ 0.02
CTSA-218ENST00000607814 OTOP3Q7RTS5 596 aa15.15■□□□□ 0.02
CTSA-218ENST00000607814 ECHDC2Q86YB7 292 aa15.15■□□□□ 0.02
CTSA-218ENST00000607814 TMEM87AQ8NBN3 555 aa15.15■□□□□ 0.02
CTSA-218ENST00000607814 RNF169Q8NCN4 708 aa15.15■□□□□ 0.02
CTSA-218ENST00000607814 FLCNQ8NFG4 579 aa15.15■□□□□ 0.02
CTSA-218ENST00000607814 SLC7A3Q8WY07 619 aa15.15■□□□□ 0.02
CTSA-218ENST00000607814 TMEM169Q96HH4 297 aa15.15■□□□□ 0.02
CTSA-218ENST00000607814 DHX33Q9H6R0 707 aaKnown RBP15.15■□□□□ 0.02
CTSA-218ENST00000607814 XPNPEP1Q9NQW7 623 aa15.15■□□□□ 0.02
CTSA-218ENST00000607814 OTOGLQ3ZCN5 2332 aa15.15■□□□□ 0.02
CTSA-218ENST00000607814 PP2D1A8MPX8 630 aa15.14■□□□□ 0.01
CTSA-218ENST00000607814 CXCL14O95715 111 aa15.14■□□□□ 0.01
CTSA-218ENST00000607814 NPR3P17342 541 aa15.14■□□□□ 0.01
CTSA-218ENST00000607814 PBX3P40426 434 aa15.14■□□□□ 0.01
CTSA-218ENST00000607814 DTWD2Q8NBA8 298 aa15.14■□□□□ 0.01
CTSA-218ENST00000607814 GCOM2Q9BZD3 368 aaPredicted RBP15.14■□□□□ 0.01
CTSA-218ENST00000607814 DUSP12Q9UNI6 340 aa15.14■□□□□ 0.01
CTSA-218ENST00000607814 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.14■□□□□ 0.01
CTSA-218ENST00000607814 COL4A3BPQ9Y5P4 624 aa15.14■□□□□ 0.01
CTSA-218ENST00000607814 A0A0U1RQF3 1178 aa15.13■□□□□ 0.01
CTSA-218ENST00000607814 USO1O60763 962 aaKnown RBP15.13■□□□□ 0.01
CTSA-218ENST00000607814 LMNAP02545 664 aaKnown RBP15.13■□□□□ 0.01
CTSA-218ENST00000607814 RARRES1P49788 294 aa15.13■□□□□ 0.01
CTSA-218ENST00000607814 LAMTOR4Q0VGL1 99 aa15.13■□□□□ 0.01
CTSA-218ENST00000607814 CUL4AQ13619 759 aa15.13■□□□□ 0.01
CTSA-218ENST00000607814 CLLU1OSQ5K130 101 aa15.13■□□□□ 0.01
CTSA-218ENST00000607814 DENND4AQ7Z401 1863 aa15.13■□□□□ 0.01
CTSA-218ENST00000607814 FERMT3Q86UX7 667 aa15.13■□□□□ 0.01
CTSA-218ENST00000607814 PPFIBP1Q86W92 1011 aa15.13■□□□□ 0.01
CTSA-218ENST00000607814 ASAP3Q8TDY4 903 aa15.13■□□□□ 0.01
CTSA-218ENST00000607814 MTRQ99707 1265 aa15.13■□□□□ 0.01
CTSA-218ENST00000607814 MINDY3Q9H8M7 445 aa15.13■□□□□ 0.01
CTSA-218ENST00000607814 GPRC5CQ9NQ84 441 aa15.13■□□□□ 0.01
CTSA-218ENST00000607814 DACT1Q9NYF0 836 aa15.13■□□□□ 0.01
CTSA-218ENST00000607814 STK39Q9UEW8 545 aa15.13■□□□□ 0.01
CTSA-218ENST00000607814 KIF3AQ9Y496 699 aa15.13■□□□□ 0.01
CTSA-218ENST00000607814 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.12■□□□□ 0.01
CTSA-218ENST00000607814 PI15O43692 258 aa15.12■□□□□ 0.01
CTSA-218ENST00000607814 LYPLA2O95372 231 aa15.12■□□□□ 0.01
CTSA-218ENST00000607814 WEE2P0C1S8 567 aa15.12■□□□□ 0.01
CTSA-218ENST00000607814 CTSAP10619 480 aa15.12■□□□□ 0.01
CTSA-218ENST00000607814 RFC5P40937 340 aa15.12■□□□□ 0.01
CTSA-218ENST00000607814 TRAPPC10P48553 1259 aa15.12■□□□□ 0.01
CTSA-218ENST00000607814 BCAR1P56945 870 aa15.12■□□□□ 0.01
CTSA-218ENST00000607814 CCDC149Q6ZUS6 474 aa15.12■□□□□ 0.01
CTSA-218ENST00000607814 GPR149Q86SP6 731 aa15.12■□□□□ 0.01
CTSA-218ENST00000607814 ZNF598Q86UK7 904 aaKnown RBP15.12■□□□□ 0.01
CTSA-218ENST00000607814 CABP7Q86V35 215 aa15.12■□□□□ 0.01
CTSA-218ENST00000607814 VPS52Q8N1B4 723 aa15.12■□□□□ 0.01
CTSA-218ENST00000607814 C12orf76Q8N812 135 aaPredicted RBP15.12■□□□□ 0.01
CTSA-218ENST00000607814 RNF149Q8NC42 400 aa15.12■□□□□ 0.01
CTSA-218ENST00000607814 SLC22A17Q8WUG5 538 aa15.12■□□□□ 0.01
CTSA-218ENST00000607814 PSPC1Q8WXF1 523 aaKnown RBP15.12■□□□□ 0.01
CTSA-218ENST00000607814 CCDC43Q96MW1 224 aaKnown RBP15.12■□□□□ 0.01
CTSA-218ENST00000607814 ZBP1Q9H171 429 aa15.12■□□□□ 0.01
CTSA-218ENST00000607814 SFXN1Q9H9B4 322 aa15.12■□□□□ 0.01
CTSA-218ENST00000607814 IFT122Q9HBG6 1241 aa15.12■□□□□ 0.01
CTSA-218ENST00000607814 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.12■□□□□ 0.01
CTSA-218ENST00000607814 IGSF9Q9P2J2 1179 aa15.12■□□□□ 0.01
CTSA-218ENST00000607814 LRWD1Q9UFC0 647 aa15.12■□□□□ 0.01
CTSA-218ENST00000607814 FBXL21Q9UKT6 434 aa15.12■□□□□ 0.01
CTSA-218ENST00000607814 ACACBO00763 2458 aa15.12■□□□□ 0.01
CTSA-218ENST00000607814 VPS37CA5D8V6 355 aaPredicted RBP15.11■□□□□ 0.01
CTSA-218ENST00000607814 CA8P35219 290 aa15.11■□□□□ 0.01
CTSA-218ENST00000607814 CCT6AP40227 531 aaKnown RBP15.11■□□□□ 0.01
CTSA-218ENST00000607814 ZRSR1Q15695 479 aaKnown RBP15.11■□□□□ 0.01
CTSA-218ENST00000607814 C15orf39Q6ZRI6 1047 aa15.11■□□□□ 0.01
CTSA-218ENST00000607814 CATSPER4Q7RTX7 472 aa15.11■□□□□ 0.01
CTSA-218ENST00000607814 DGLUCYQ7Z3D6 616 aa15.11■□□□□ 0.01
CTSA-218ENST00000607814 DDX53Q86TM3 631 aaKnown RBP15.11■□□□□ 0.01
CTSA-218ENST00000607814 LPPQ93052 612 aa15.11■□□□□ 0.01
CTSA-218ENST00000607814 RMDN1Q96DB5 314 aa15.11■□□□□ 0.01
CTSA-218ENST00000607814 PLIN2Q99541 437 aa15.11■□□□□ 0.01
CTSA-218ENST00000607814 JPH2Q9BR39 696 aaPredicted RBP15.11■□□□□ 0.01
CTSA-218ENST00000607814 POLR3CQ9BUI4 534 aaPredicted RBP15.11■□□□□ 0.01
CTSA-218ENST00000607814 KCNK12Q9HB15 430 aa15.11■□□□□ 0.01
CTSA-218ENST00000607814 ANKEF1Q9NU02 776 aa15.11■□□□□ 0.01
CTSA-218ENST00000607814 WNT16Q9UBV4 365 aa15.11■□□□□ 0.01
CTSA-218ENST00000607814 KIAA1024Q9UPX6 916 aa15.11■□□□□ 0.01
CTSA-218ENST00000607814 PIN4Q9Y237 131 aaKnown RBP15.11■□□□□ 0.01
CTSA-218ENST00000607814 KMT2BQ9UMN6 2715 aaPredicted RBP15.1■□□□□ 0.01
CTSA-218ENST00000607814 MEIS3P2A8K0S8 358 aa15.1■□□□□ 0.01
CTSA-218ENST00000607814 EPCAMP16422 314 aa15.1■□□□□ 0.01
CTSA-218ENST00000607814 FXR2P51116 673 aaKnown RBP eCLIP15.1■□□□□ 0.01
CTSA-218ENST00000607814 PUM1Q14671 1186 aaKnown RBP eCLIP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms