RNA–Protein interactions for RNA: ENST00000607632.1

PRDM16-210, Transcript of PR/SET domain 16, humanhuman

TSL 2

Gene PRDM16, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-210ENST00000607632 KIFC3Q9BVG8 833 aa15.81■□□□□ 0.12
PRDM16-210ENST00000607632 RNF39Q9H2S5 420 aa15.81■□□□□ 0.12
PRDM16-210ENST00000607632 POLD4Q9HCU8 107 aa15.81■□□□□ 0.12
PRDM16-210ENST00000607632 SPG21Q9NZD8 308 aa15.81■□□□□ 0.12
PRDM16-210ENST00000607632 KANSL3Q9P2N6 904 aa15.81■□□□□ 0.12
PRDM16-210ENST00000607632 TDRD15B5MCY1 1934 aaKnown RBP15.8■□□□□ 0.12
PRDM16-210ENST00000607632 GALTP07902 379 aa15.8■□□□□ 0.12
PRDM16-210ENST00000607632 BMP1P13497 986 aa15.8■□□□□ 0.12
PRDM16-210ENST00000607632 PLCG1P19174 1290 aa15.8■□□□□ 0.12
PRDM16-210ENST00000607632 MARCKSP29966 332 aaPredicted RBP15.8■□□□□ 0.12
PRDM16-210ENST00000607632 ZNF131P52739 623 aa15.8■□□□□ 0.12
PRDM16-210ENST00000607632 PEX3P56589 373 aa15.8■□□□□ 0.12
PRDM16-210ENST00000607632 TFF2Q03403 129 aa15.8■□□□□ 0.12
PRDM16-210ENST00000607632 DSC1Q08554 894 aa15.8■□□□□ 0.12
PRDM16-210ENST00000607632 PRPF4BQ13523 1007 aaKnown RBP15.8■□□□□ 0.12
PRDM16-210ENST00000607632 KARSQ15046 597 aaKnown RBP15.8■□□□□ 0.12
PRDM16-210ENST00000607632 SKIV2LQ15477 1246 aaKnown RBP15.8■□□□□ 0.12
PRDM16-210ENST00000607632 LONRF3Q496Y0 759 aa15.8■□□□□ 0.12
PRDM16-210ENST00000607632 NT5DC1Q5TFE4 455 aa15.8■□□□□ 0.12
PRDM16-210ENST00000607632 USP49Q70CQ1 688 aa15.8■□□□□ 0.12
PRDM16-210ENST00000607632 LINC00301Q8NCQ3 95 aa15.8■□□□□ 0.12
PRDM16-210ENST00000607632 GSTCDQ8NEC7 633 aa15.8■□□□□ 0.12
PRDM16-210ENST00000607632 PLIN2Q99541 437 aa15.8■□□□□ 0.12
PRDM16-210ENST00000607632 TMEM175Q9BSA9 504 aa15.8■□□□□ 0.12
PRDM16-210ENST00000607632 NXF3Q9H4D5 531 aaKnown RBP15.8■□□□□ 0.12
PRDM16-210ENST00000607632 TLR9Q9NR96 1032 aa15.8■□□□□ 0.12
PRDM16-210ENST00000607632 KCNG1Q9UIX4 513 aa15.8■□□□□ 0.12
PRDM16-210ENST00000607632 ODF2LQ9ULJ1 636 aa15.8■□□□□ 0.12
PRDM16-210ENST00000607632 RBM19Q9Y4C8 960 aaKnown RBP15.8■□□□□ 0.12
PRDM16-210ENST00000607632 HES2Q9Y543 173 aa15.8■□□□□ 0.12
PRDM16-210ENST00000607632 DDHD2O94830 711 aa15.79■□□□□ 0.12
PRDM16-210ENST00000607632 NPTXRO95502 500 aa15.79■□□□□ 0.12
PRDM16-210ENST00000607632 ZSCAN22P10073 491 aaPredicted RBP15.79■□□□□ 0.12
PRDM16-210ENST00000607632 PLS3P13797 630 aa15.79■□□□□ 0.12
PRDM16-210ENST00000607632 PBX3P40426 434 aa15.79■□□□□ 0.12
PRDM16-210ENST00000607632 ERVFC1P60507 584 aa15.79■□□□□ 0.12
PRDM16-210ENST00000607632 DMP1Q13316 513 aaPredicted RBP15.79■□□□□ 0.12
PRDM16-210ENST00000607632 ZRSR1Q15695 479 aaKnown RBP15.79■□□□□ 0.12
PRDM16-210ENST00000607632 LEXMQ3ZCV2 418 aa15.79■□□□□ 0.12
PRDM16-210ENST00000607632 TMEM173Q86WV6 379 aaPredicted RBP15.79■□□□□ 0.12
PRDM16-210ENST00000607632 CDR2LQ86X02 465 aaPredicted RBP15.79■□□□□ 0.12
PRDM16-210ENST00000607632 ZNF280BQ86YH2 543 aa15.79■□□□□ 0.12
PRDM16-210ENST00000607632 HACE1Q8IYU2 909 aa15.79■□□□□ 0.12
PRDM16-210ENST00000607632 URGCPQ8TCY9 931 aa15.79■□□□□ 0.12
PRDM16-210ENST00000607632 RAD54LQ92698 747 aa15.79■□□□□ 0.12
PRDM16-210ENST00000607632 SYMPKQ92797 1274 aaKnown RBP15.79■□□□□ 0.12
PRDM16-210ENST00000607632 EPSTI1Q96J88 318 aa15.79■□□□□ 0.12
PRDM16-210ENST00000607632 PTPRHQ9HD43 1115 aa15.79■□□□□ 0.12
PRDM16-210ENST00000607632 DNAJB4Q9UDY4 337 aa15.79■□□□□ 0.12
PRDM16-210ENST00000607632 TNFSF13BQ9Y275 285 aa15.79■□□□□ 0.12
PRDM16-210ENST00000607632 INPP5FQ9Y2H2 1132 aa15.79■□□□□ 0.12
PRDM16-210ENST00000607632 ARL5CA6NH57 179 aa15.78■□□□□ 0.12
PRDM16-210ENST00000607632 K7ERI5 159 aa15.78■□□□□ 0.12
PRDM16-210ENST00000607632 PPP6R2O75170 966 aa15.78■□□□□ 0.12
PRDM16-210ENST00000607632 YEATS4O95619 227 aa15.78■□□□□ 0.12
PRDM16-210ENST00000607632 EFEMP2O95967 443 aa15.78■□□□□ 0.12
PRDM16-210ENST00000607632 F13A1P00488 732 aa15.78■□□□□ 0.12
PRDM16-210ENST00000607632 PROZP22891 400 aa15.78■□□□□ 0.12
PRDM16-210ENST00000607632 LTBRP36941 435 aa15.78■□□□□ 0.12
PRDM16-210ENST00000607632 MLH1P40692 756 aa15.78■□□□□ 0.12
PRDM16-210ENST00000607632 SLC11A1P49279 550 aa15.78■□□□□ 0.12
PRDM16-210ENST00000607632 ALDH7A1P49419 539 aaKnown RBP15.78■□□□□ 0.12
PRDM16-210ENST00000607632 KCNC3Q14003 757 aa15.78■□□□□ 0.12
PRDM16-210ENST00000607632 EEF1DP3Q658K8 133 aa15.78■□□□□ 0.12
PRDM16-210ENST00000607632 ADGRD2Q7Z7M1 963 aa15.78■□□□□ 0.12
PRDM16-210ENST00000607632 COLGALT2Q8IYK4 626 aa15.78■□□□□ 0.12
PRDM16-210ENST00000607632 KRI1Q8N9T8 703 aaKnown RBP15.78■□□□□ 0.12
PRDM16-210ENST00000607632 TMEM161BQ8NDZ6 487 aa15.78■□□□□ 0.12
PRDM16-210ENST00000607632 LARP4BQ92615 738 aaKnown RBP15.78■□□□□ 0.12
PRDM16-210ENST00000607632 PPP2R3CQ969Q6 453 aa15.78■□□□□ 0.12
PRDM16-210ENST00000607632 IGSF21Q96ID5 467 aa15.78■□□□□ 0.12
PRDM16-210ENST00000607632 CLIC6Q96NY7 704 aa15.78■□□□□ 0.12
PRDM16-210ENST00000607632 GAD1Q99259 594 aa15.78■□□□□ 0.12
PRDM16-210ENST00000607632 ACO2Q99798 780 aaKnown RBP15.78■□□□□ 0.12
PRDM16-210ENST00000607632 TRIM6Q9C030 488 aaPredicted RBP15.78■□□□□ 0.12
PRDM16-210ENST00000607632 NGRNQ9NPE2 291 aaKnown RBP15.78■□□□□ 0.12
PRDM16-210ENST00000607632 KMT5AQ9NQR1 393 aa15.78■□□□□ 0.12
PRDM16-210ENST00000607632 MIOSQ9NXC5 875 aa15.78■□□□□ 0.12
PRDM16-210ENST00000607632 STK17AQ9UEE5 414 aa15.78■□□□□ 0.12
PRDM16-210ENST00000607632 PUF60Q9UHX1 559 aaKnown RBP15.78■□□□□ 0.12
PRDM16-210ENST00000607632 TTC28Q96AY4 2481 aa15.78■□□□□ 0.12
PRDM16-210ENST00000607632 ABLIM1O14639 778 aa15.77■□□□□ 0.12
PRDM16-210ENST00000607632 ZC3H11AO75152 810 aaKnown RBP eCLIP15.77■□□□□ 0.12
PRDM16-210ENST00000607632 BRD1O95696 1058 aa15.77■□□□□ 0.12
PRDM16-210ENST00000607632 SSBP05455 408 aaKnown RBP eCLIP15.77■□□□□ 0.12
PRDM16-210ENST00000607632 SCP2P22307 547 aa15.77■□□□□ 0.12
PRDM16-210ENST00000607632 DDIT3P35638 169 aa15.77■□□□□ 0.12
PRDM16-210ENST00000607632 NCKAP1LP55160 1127 aa15.77■□□□□ 0.12
PRDM16-210ENST00000607632 KRT17Q04695 432 aa15.77■□□□□ 0.12
PRDM16-210ENST00000607632 ADAM15Q13444 863 aa15.77■□□□□ 0.12
PRDM16-210ENST00000607632 PKP1Q13835 747 aa15.77■□□□□ 0.12
PRDM16-210ENST00000607632 GIT2Q14161 759 aa15.77■□□□□ 0.12
PRDM16-210ENST00000607632 MCM6Q14566 821 aa15.77■□□□□ 0.12
PRDM16-210ENST00000607632 DCAF4L1Q3SXM0 396 aa15.77■□□□□ 0.12
PRDM16-210ENST00000607632 ATF7IP2Q5U623 682 aa15.77■□□□□ 0.12
PRDM16-210ENST00000607632 ATL3Q6DD88 541 aa15.77■□□□□ 0.12
PRDM16-210ENST00000607632 GPBP1Q86WP2 473 aa15.77■□□□□ 0.12
PRDM16-210ENST00000607632 RNF168Q8IYW5 571 aaPredicted RBP15.77■□□□□ 0.12
PRDM16-210ENST00000607632 EFHBQ8N7U6 833 aa15.77■□□□□ 0.12
PRDM16-210ENST00000607632 BCL7CQ8WUZ0 217 aaPredicted RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms