RNA–Protein interactions for RNA: ENST00000606952.5

PMF1-206, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 1,275 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-206ENST00000606952 PSMC2P35998 433 aaKnown RBP18.04■□□□□ 0.48
PMF1-206ENST00000606952 COPB1P53618 953 aaKnown RBP18.04■□□□□ 0.48
PMF1-206ENST00000606952 PPP2R3AQ06190 1150 aa18.04■□□□□ 0.48
PMF1-206ENST00000606952 MCL1Q07820 350 aa18.04■□□□□ 0.48
PMF1-206ENST00000606952 SNX17Q15036 470 aa18.04■□□□□ 0.48
PMF1-206ENST00000606952 KIZQ2M2Z5 673 aa18.04■□□□□ 0.48
PMF1-206ENST00000606952 C1orf53Q5VUE5 145 aa18.04■□□□□ 0.48
PMF1-206ENST00000606952 WNT8BQ93098 351 aa18.04■□□□□ 0.48
PMF1-206ENST00000606952 CELF4Q9BZC1 486 aaKnown RBP18.04■□□□□ 0.48
PMF1-206ENST00000606952 KIAA1586Q9HCI6 787 aa18.04■□□□□ 0.48
PMF1-206ENST00000606952 INTS13Q9NVM9 706 aa18.04■□□□□ 0.48
PMF1-206ENST00000606952 SERPINC1P01008 464 aa18.03■□□□□ 0.48
PMF1-206ENST00000606952 EPB41P11171 864 aaKnown RBP18.03■□□□□ 0.48
PMF1-206ENST00000606952 EIF4BP23588 611 aaKnown RBP18.03■□□□□ 0.48
PMF1-206ENST00000606952 CASP4P49662 377 aa18.03■□□□□ 0.48
PMF1-206ENST00000606952 UBASH3AP57075 661 aa18.03■□□□□ 0.48
PMF1-206ENST00000606952 PRPF4BQ13523 1007 aaKnown RBP18.03■□□□□ 0.48
PMF1-206ENST00000606952 NR1I3Q14994 352 aa18.03■□□□□ 0.48
PMF1-206ENST00000606952 MAN2A1Q16706 1144 aa18.03■□□□□ 0.48
PMF1-206ENST00000606952 MIIPQ5JXC2 388 aa18.03■□□□□ 0.48
PMF1-206ENST00000606952 BICD1Q96G01 975 aa18.03■□□□□ 0.48
PMF1-206ENST00000606952 NAP1L5Q96NT1 182 aaPredicted RBP18.03■□□□□ 0.48
PMF1-206ENST00000606952 TUBGCP2Q9BSJ2 902 aa18.03■□□□□ 0.48
PMF1-206ENST00000606952 TRIM5Q9C035 493 aa18.03■□□□□ 0.48
PMF1-206ENST00000606952 XPO4Q9C0E2 1151 aaKnown RBP18.03■□□□□ 0.48
PMF1-206ENST00000606952 SENP6Q9GZR1 1112 aaPredicted RBP18.03■□□□□ 0.48
PMF1-206ENST00000606952 MCOLN1Q9GZU1 580 aa18.03■□□□□ 0.48
PMF1-206ENST00000606952 HAPLN2Q9GZV7 340 aa18.03■□□□□ 0.48
PMF1-206ENST00000606952 CDHR5Q9HBB8 845 aa18.03■□□□□ 0.48
PMF1-206ENST00000606952 RTN4Q9NQC3 1192 aaKnown RBP18.03■□□□□ 0.48
PMF1-206ENST00000606952 IFNKQ9P0W0 207 aa18.03■□□□□ 0.48
PMF1-206ENST00000606952 FRMD4BQ9Y2L6 1034 aa18.03■□□□□ 0.48
PMF1-206ENST00000606952 SQORQ9Y6N5 450 aa18.03■□□□□ 0.48
PMF1-206ENST00000606952 TTLL13PA6NNM8 815 aa18.02■□□□□ 0.48
PMF1-206ENST00000606952 LGALS16A8MUM7 142 aa18.02■□□□□ 0.48
PMF1-206ENST00000606952 EXTL3O43909 919 aa18.02■□□□□ 0.48
PMF1-206ENST00000606952 FAM189A1O60320 539 aa18.02■□□□□ 0.48
PMF1-206ENST00000606952 TSPAN1O60635 241 aa18.02■□□□□ 0.48
PMF1-206ENST00000606952 EXOC3O60645 756 aa18.02■□□□□ 0.48
PMF1-206ENST00000606952 LDHAP00338 332 aaKnown RBP18.02■□□□□ 0.48
PMF1-206ENST00000606952 CD4P01730 458 aa18.02■□□□□ 0.48
PMF1-206ENST00000606952 AXLP30530 894 aa18.02■□□□□ 0.48
PMF1-206ENST00000606952 POU5F1Q01860 360 aaKnown RBP18.02■□□□□ 0.48
PMF1-206ENST00000606952 RALGAPA2Q2PPJ7 1873 aa18.02■□□□□ 0.48
PMF1-206ENST00000606952 HSP90AA4PQ58FG1 418 aa18.02■□□□□ 0.48
PMF1-206ENST00000606952 MPZL3Q6UWV2 235 aa18.02■□□□□ 0.48
PMF1-206ENST00000606952 FAM126BQ8IXS8 530 aa18.02■□□□□ 0.48
PMF1-206ENST00000606952 FAM186BQ8IYM0 893 aa18.02■□□□□ 0.48
PMF1-206ENST00000606952 GPD1LQ8N335 351 aa18.02■□□□□ 0.48
PMF1-206ENST00000606952 TMEM40Q8WWA1 233 aa18.02■□□□□ 0.48
PMF1-206ENST00000606952 POMGNT1Q8WZA1 660 aa18.02■□□□□ 0.48
PMF1-206ENST00000606952 ANP32BQ92688 251 aaKnown RBP18.02■□□□□ 0.48
PMF1-206ENST00000606952 VTI1AQ96AJ9 217 aa18.02■□□□□ 0.48
PMF1-206ENST00000606952 ZNF668Q96K58 619 aaPredicted RBP18.02■□□□□ 0.48
PMF1-206ENST00000606952 PPP1R9BQ96SB3 815 aa18.02■□□□□ 0.48
PMF1-206ENST00000606952 OSMRQ99650 979 aa18.02■□□□□ 0.48
PMF1-206ENST00000606952 TANC1Q9C0D5 1861 aa18.02■□□□□ 0.48
PMF1-206ENST00000606952 TRMT13Q9NUP7 481 aaKnown RBP18.02■□□□□ 0.48
PMF1-206ENST00000606952 ARMCX3Q9UH62 379 aaPredicted RBP18.02■□□□□ 0.48
PMF1-206ENST00000606952 CDY2AQ9Y6F7 541 aa18.02■□□□□ 0.48
PMF1-206ENST00000606952 MROH7Q68CQ1 1323 aa18.01■□□□□ 0.47
PMF1-206ENST00000606952 B4GALT5O43286 388 aa18.01■□□□□ 0.47
PMF1-206ENST00000606952 B4GALT4O60513 344 aa18.01■□□□□ 0.47
PMF1-206ENST00000606952 TPM3P06753 285 aa18.01■□□□□ 0.47
PMF1-206ENST00000606952 ARF4P18085 180 aaPredicted RBP18.01■□□□□ 0.47
PMF1-206ENST00000606952 SFPQP23246 707 aaKnown RBP eCLIP18.01■□□□□ 0.47
PMF1-206ENST00000606952 PBX1P40424 430 aa18.01■□□□□ 0.47
PMF1-206ENST00000606952 CYP2J2P51589 502 aa18.01■□□□□ 0.47
PMF1-206ENST00000606952 CCDC40Q4G0X9 1142 aa18.01■□□□□ 0.47
PMF1-206ENST00000606952 FILIP1LQ4L180 1135 aa18.01■□□□□ 0.47
PMF1-206ENST00000606952 ATF7IP2Q5U623 682 aa18.01■□□□□ 0.47
PMF1-206ENST00000606952 INTS8Q75QN2 995 aaKnown RBP18.01■□□□□ 0.47
PMF1-206ENST00000606952 EEF2KMTQ96G04 330 aa18.01■□□□□ 0.47
PMF1-206ENST00000606952 MFSD14AQ96MC6 490 aa18.01■□□□□ 0.47
PMF1-206ENST00000606952 SCLT1Q96NL6 688 aa18.01■□□□□ 0.47
PMF1-206ENST00000606952 AGPAT5Q9NUQ2 364 aa18.01■□□□□ 0.47
PMF1-206ENST00000606952 TAB2Q9NYJ8 693 aa18.01■□□□□ 0.47
PMF1-206ENST00000606952 ANK1P16157 1881 aa18.01■□□□□ 0.47
PMF1-206ENST00000606952 A0A1B0GUA9 196 aa18■□□□□ 0.47
PMF1-206ENST00000606952 M0QZ92 97 aa18■□□□□ 0.47
PMF1-206ENST00000606952 N4BP3O15049 544 aa18■□□□□ 0.47
PMF1-206ENST00000606952 CLDN3O15551 220 aa18■□□□□ 0.47
PMF1-206ENST00000606952 ERLIN2O94905 339 aa18■□□□□ 0.47
PMF1-206ENST00000606952 CHRNA1P02708 482 aa18■□□□□ 0.47
PMF1-206ENST00000606952 MCF2P10911 925 aa18■□□□□ 0.47
PMF1-206ENST00000606952 MTIF2P46199 727 aaKnown RBP18■□□□□ 0.47
PMF1-206ENST00000606952 TMEM62Q0P6H9 643 aa18■□□□□ 0.47
PMF1-206ENST00000606952 NOLC1Q14978 699 aaKnown RBP eCLIP18■□□□□ 0.47
PMF1-206ENST00000606952 CEP135Q66GS9 1140 aa18■□□□□ 0.47
PMF1-206ENST00000606952 TRAF7Q6Q0C0 670 aa18■□□□□ 0.47
PMF1-206ENST00000606952 FAM43BQ6ZT52 329 aaPredicted RBP18■□□□□ 0.47
PMF1-206ENST00000606952 ANKRD33Q7Z3H0 272 aa18■□□□□ 0.47
PMF1-206ENST00000606952 CAGE1Q8TC20 777 aa18■□□□□ 0.47
PMF1-206ENST00000606952 TMC2Q8TDI7 906 aa18■□□□□ 0.47
PMF1-206ENST00000606952 SLC35C1Q96A29 364 aa18■□□□□ 0.47
PMF1-206ENST00000606952 CCDC51Q96ER9 411 aa18■□□□□ 0.47
PMF1-206ENST00000606952 ZBTB45Q96K62 511 aaPredicted RBP18■□□□□ 0.47
PMF1-206ENST00000606952 PPP1R16BQ96T49 567 aa18■□□□□ 0.47
PMF1-206ENST00000606952 PDZD7Q9H5P4 517 aa18■□□□□ 0.47
PMF1-206ENST00000606952 AGO2Q9UKV8 859 aaKnown RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms