RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 TFIP11Q9UBB9 837 aaKnown RBP15.9■□□□□ 0.14
TUBE1-208ENST00000604743 PARP2Q9UGN5 583 aa15.9■□□□□ 0.14
TUBE1-208ENST00000604743 FBXO2Q9UK22 296 aaPredicted RBP15.9■□□□□ 0.14
TUBE1-208ENST00000604743 CNTNAP2Q9UHC6 1331 aa15.9■□□□□ 0.14
TUBE1-208ENST00000604743 TRIP11Q15643 1979 aa15.89■□□□□ 0.13
TUBE1-208ENST00000604743 K7ERI5 159 aa15.89■□□□□ 0.13
TUBE1-208ENST00000604743 EDN1P05305 212 aa15.89■□□□□ 0.13
TUBE1-208ENST00000604743 GTF2F1P35269 517 aaKnown RBP eCLIP15.89■□□□□ 0.13
TUBE1-208ENST00000604743 NPTX2P47972 431 aa15.89■□□□□ 0.13
TUBE1-208ENST00000604743 KCNQ1P51787 676 aa15.89■□□□□ 0.13
TUBE1-208ENST00000604743 EFNA5P52803 228 aa15.89■□□□□ 0.13
TUBE1-208ENST00000604743 KRT17Q04695 432 aa15.89■□□□□ 0.13
TUBE1-208ENST00000604743 MAPK7Q13164 816 aa15.89■□□□□ 0.13
TUBE1-208ENST00000604743 MCM6Q14566 821 aa15.89■□□□□ 0.13
TUBE1-208ENST00000604743 STK38Q15208 465 aa15.89■□□□□ 0.13
TUBE1-208ENST00000604743 FAM187BQ17R55 369 aa15.89■□□□□ 0.13
TUBE1-208ENST00000604743 USP49Q70CQ1 688 aa15.89■□□□□ 0.13
TUBE1-208ENST00000604743 ADGRD2Q7Z7M1 963 aa15.89■□□□□ 0.13
TUBE1-208ENST00000604743 RBM23Q86U06 439 aaKnown RBP15.89■□□□□ 0.13
TUBE1-208ENST00000604743 GPBP1Q86WP2 473 aa15.89■□□□□ 0.13
TUBE1-208ENST00000604743 ZNF280BQ86YH2 543 aa15.89■□□□□ 0.13
TUBE1-208ENST00000604743 HACE1Q8IYU2 909 aa15.89■□□□□ 0.13
TUBE1-208ENST00000604743 KCTD17Q8N5Z5 321 aa15.89■□□□□ 0.13
TUBE1-208ENST00000604743 LRRC15Q8TF66 581 aa15.89■□□□□ 0.13
TUBE1-208ENST00000604743 MRPS27Q92552 414 aaKnown RBP15.89■□□□□ 0.13
TUBE1-208ENST00000604743 GAD1Q99259 594 aa15.89■□□□□ 0.13
TUBE1-208ENST00000604743 CCDC113Q9H0I3 377 aa15.89■□□□□ 0.13
TUBE1-208ENST00000604743 PDZD7Q9H5P4 517 aa15.89■□□□□ 0.13
TUBE1-208ENST00000604743 UBE2ZQ9H832 354 aaPredicted RBP15.89■□□□□ 0.13
TUBE1-208ENST00000604743 UBN1Q9NPG3 1134 aa15.89■□□□□ 0.13
TUBE1-208ENST00000604743 KMT5AQ9NQR1 393 aa15.89■□□□□ 0.13
TUBE1-208ENST00000604743 TLR9Q9NR96 1032 aa15.89■□□□□ 0.13
TUBE1-208ENST00000604743 CLDND1Q9NY35 253 aa15.89■□□□□ 0.13
TUBE1-208ENST00000604743 DNAJB4Q9UDY4 337 aa15.89■□□□□ 0.13
TUBE1-208ENST00000604743 PUF60Q9UHX1 559 aaKnown RBP15.89■□□□□ 0.13
TUBE1-208ENST00000604743 SRPRBQ9Y5M8 271 aaKnown RBP15.89■□□□□ 0.13
TUBE1-208ENST00000604743 ACKR2O00590 384 aa15.88■□□□□ 0.13
TUBE1-208ENST00000604743 N4BP3O15049 544 aa15.88■□□□□ 0.13
TUBE1-208ENST00000604743 SLC16A4O15374 487 aa15.88■□□□□ 0.13
TUBE1-208ENST00000604743 SLC26A4O43511 780 aa15.88■□□□□ 0.13
TUBE1-208ENST00000604743 DDHD2O94830 711 aa15.88■□□□□ 0.13
TUBE1-208ENST00000604743 ZSCAN22P10073 491 aaPredicted RBP15.88■□□□□ 0.13
TUBE1-208ENST00000604743 KCNA5P22460 613 aa15.88■□□□□ 0.13
TUBE1-208ENST00000604743 GUCY2CP25092 1073 aa15.88■□□□□ 0.13
TUBE1-208ENST00000604743 CA8P35219 290 aa15.88■□□□□ 0.13
TUBE1-208ENST00000604743 PPM1AP35813 382 aa15.88■□□□□ 0.13
TUBE1-208ENST00000604743 MLH1P40692 756 aa15.88■□□□□ 0.13
TUBE1-208ENST00000604743 ERVFC1P60507 584 aa15.88■□□□□ 0.13
TUBE1-208ENST00000604743 UBE3AQ05086 875 aa15.88■□□□□ 0.13
TUBE1-208ENST00000604743 HYAL1Q12794 435 aa15.88■□□□□ 0.13
TUBE1-208ENST00000604743 SLC39A14Q15043 492 aa15.88■□□□□ 0.13
TUBE1-208ENST00000604743 AAK1Q2M2I8 961 aa15.88■□□□□ 0.13
TUBE1-208ENST00000604743 PLPP4Q5VZY2 271 aa15.88■□□□□ 0.13
TUBE1-208ENST00000604743 SLC39A11Q8N1S5 342 aa15.88■□□□□ 0.13
TUBE1-208ENST00000604743 SYMPKQ92797 1274 aaKnown RBP15.88■□□□□ 0.13
TUBE1-208ENST00000604743 ZFP42Q96MM3 310 aa15.88■□□□□ 0.13
TUBE1-208ENST00000604743 ZNF396Q96N95 335 aaPredicted RBP15.88■□□□□ 0.13
TUBE1-208ENST00000604743 TIPINQ9BVW5 301 aa15.88■□□□□ 0.13
TUBE1-208ENST00000604743 COL25A1Q9BXS0 654 aaPredicted RBP15.88■□□□□ 0.13
TUBE1-208ENST00000604743 CCSER1Q9C0I3 900 aa15.88■□□□□ 0.13
TUBE1-208ENST00000604743 ENTPD7Q9NQZ7 604 aa15.88■□□□□ 0.13
TUBE1-208ENST00000604743 BLOC1S4Q9NUP1 217 aa15.88■□□□□ 0.13
TUBE1-208ENST00000604743 KLK14Q9P0G3 267 aa15.88■□□□□ 0.13
TUBE1-208ENST00000604743 DAXXQ9UER7 740 aaPredicted RBP15.88■□□□□ 0.13
TUBE1-208ENST00000604743 CCDC39Q9UFE4 941 aa15.88■□□□□ 0.13
TUBE1-208ENST00000604743 ARL5CA6NH57 179 aa15.87■□□□□ 0.13
TUBE1-208ENST00000604743 B4GALT3O60512 393 aa15.87■□□□□ 0.13
TUBE1-208ENST00000604743 KRT18P05783 430 aaKnown RBP15.87■□□□□ 0.13
TUBE1-208ENST00000604743 GALTP07902 379 aa15.87■□□□□ 0.13
TUBE1-208ENST00000604743 NRIP1P48552 1158 aa15.87■□□□□ 0.13
TUBE1-208ENST00000604743 SLC11A1P49279 550 aa15.87■□□□□ 0.13
TUBE1-208ENST00000604743 SCNN1GP51170 649 aa15.87■□□□□ 0.13
TUBE1-208ENST00000604743 PLCB3Q01970 1234 aa15.87■□□□□ 0.13
TUBE1-208ENST00000604743 PKP1Q13835 747 aa15.87■□□□□ 0.13
TUBE1-208ENST00000604743 ARSHQ5FYA8 562 aa15.87■□□□□ 0.13
TUBE1-208ENST00000604743 NT5DC1Q5TFE4 455 aa15.87■□□□□ 0.13
TUBE1-208ENST00000604743 ATF7IP2Q5U623 682 aa15.87■□□□□ 0.13
TUBE1-208ENST00000604743 EEF1DP3Q658K8 133 aa15.87■□□□□ 0.13
TUBE1-208ENST00000604743 TMC7Q7Z402 723 aa15.87■□□□□ 0.13
TUBE1-208ENST00000604743 KRI1Q8N9T8 703 aaKnown RBP15.87■□□□□ 0.13
TUBE1-208ENST00000604743 RSPH1Q8WYR4 309 aa15.87■□□□□ 0.13
TUBE1-208ENST00000604743 RAD54LQ92698 747 aa15.87■□□□□ 0.13
TUBE1-208ENST00000604743 PPP2R3CQ969Q6 453 aa15.87■□□□□ 0.13
TUBE1-208ENST00000604743 TMEM169Q96HH4 297 aa15.87■□□□□ 0.13
TUBE1-208ENST00000604743 ADPGKQ9BRR6 497 aa15.87■□□□□ 0.13
TUBE1-208ENST00000604743 PANK2Q9BZ23 570 aa15.87■□□□□ 0.13
TUBE1-208ENST00000604743 ZHX3Q9H4I2 956 aa15.87■□□□□ 0.13
TUBE1-208ENST00000604743 MIOSQ9NXC5 875 aa15.87■□□□□ 0.13
TUBE1-208ENST00000604743 KANSL3Q9P2N6 904 aa15.87■□□□□ 0.13
TUBE1-208ENST00000604743 XIRP2A4UGR9 3374 aa15.86■□□□□ 0.13
TUBE1-208ENST00000604743 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.86■□□□□ 0.13
TUBE1-208ENST00000604743 H3BQ06 376 aaPredicted RBP15.86■□□□□ 0.13
TUBE1-208ENST00000604743 PER2O15055 1255 aa15.86■□□□□ 0.13
TUBE1-208ENST00000604743 F13A1P00488 732 aa15.86■□□□□ 0.13
TUBE1-208ENST00000604743 PLS3P13797 630 aa15.86■□□□□ 0.13
TUBE1-208ENST00000604743 TXLNAP40222 546 aa15.86■□□□□ 0.13
TUBE1-208ENST00000604743 NASPP49321 788 aaPredicted RBP15.86■□□□□ 0.13
TUBE1-208ENST00000604743 TMEM173Q86WV6 379 aaPredicted RBP15.86■□□□□ 0.13
TUBE1-208ENST00000604743 LARP4BQ92615 738 aaKnown RBP15.86■□□□□ 0.13
TUBE1-208ENST00000604743 PABPC5Q96DU9 382 aaKnown RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms