RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 SEL1L2Q5TEA6 688 aa13.34□□□□□ -0.27
CDCA3-212ENST00000604599 SFR1Q86XK3 245 aa13.34□□□□□ -0.27
CDCA3-212ENST00000604599 UBL4BQ8N7F7 174 aa13.34□□□□□ -0.27
CDCA3-212ENST00000604599 ENDOVQ8N8Q3 282 aaKnown RBP13.34□□□□□ -0.27
CDCA3-212ENST00000604599 RBBP8NLQ8NC74 664 aaPredicted RBP13.34□□□□□ -0.27
CDCA3-212ENST00000604599 BCL9O00512 1426 aa13.33□□□□□ -0.27
CDCA3-212ENST00000604599 RFC4P35249 363 aa13.33□□□□□ -0.27
CDCA3-212ENST00000604599 STRN3Q13033 797 aa13.33□□□□□ -0.27
CDCA3-212ENST00000604599 CUL3Q13618 768 aa13.33□□□□□ -0.27
CDCA3-212ENST00000604599 CCDC6Q16204 474 aa13.33□□□□□ -0.27
CDCA3-212ENST00000604599 ARSHQ5FYA8 562 aa13.33□□□□□ -0.27
CDCA3-212ENST00000604599 APBB1IPQ7Z5R6 666 aaPredicted RBP13.33□□□□□ -0.27
CDCA3-212ENST00000604599 CPNE8Q86YQ8 564 aa13.33□□□□□ -0.27
CDCA3-212ENST00000604599 FAM136AQ96C01 138 aa13.33□□□□□ -0.27
CDCA3-212ENST00000604599 FGD4Q96M96 766 aa13.33□□□□□ -0.27
CDCA3-212ENST00000604599 PWWP2AQ96N64 755 aa13.33□□□□□ -0.27
CDCA3-212ENST00000604599 IKZF4Q9H2S9 585 aa13.33□□□□□ -0.27
CDCA3-212ENST00000604599 PCMTD2Q9NV79 361 aa13.33□□□□□ -0.27
CDCA3-212ENST00000604599 POTEFA5A3E0 1075 aa13.33□□□□□ -0.28
CDCA3-212ENST00000604599 LRRN2O75325 713 aa13.33□□□□□ -0.28
CDCA3-212ENST00000604599 NR3C1P04150 777 aa13.33□□□□□ -0.28
CDCA3-212ENST00000604599 POTEIP0CG38 1075 aa13.33□□□□□ -0.28
CDCA3-212ENST00000604599 T-ENOLP0DO92 83 aa13.33□□□□□ -0.28
CDCA3-212ENST00000604599 PYGMP11217 842 aa13.33□□□□□ -0.28
CDCA3-212ENST00000604599 ALAS1P13196 640 aa13.33□□□□□ -0.28
CDCA3-212ENST00000604599 MESDQ14696 234 aa13.33□□□□□ -0.28
CDCA3-212ENST00000604599 ARHGAP44Q17R89 818 aa13.33□□□□□ -0.28
CDCA3-212ENST00000604599 POTEGQ6S5H5 508 aa13.33□□□□□ -0.28
CDCA3-212ENST00000604599 POTEEQ6S8J3 1075 aa13.33□□□□□ -0.28
CDCA3-212ENST00000604599 ARHGAP22Q7Z5H3 698 aa13.33□□□□□ -0.28
CDCA3-212ENST00000604599 ZC3H18Q86VM9 953 aaKnown RBP13.33□□□□□ -0.28
CDCA3-212ENST00000604599 DZIP1Q86YF9 867 aaKnown RBP13.33□□□□□ -0.28
CDCA3-212ENST00000604599 LRRC8CQ8TDW0 803 aa13.33□□□□□ -0.28
CDCA3-212ENST00000604599 ZNF333Q96JL9 665 aa13.33□□□□□ -0.28
CDCA3-212ENST00000604599 ZSWIM1Q9BR11 485 aa13.33□□□□□ -0.28
CDCA3-212ENST00000604599 BCAS3Q9H6U6 928 aa13.33□□□□□ -0.28
CDCA3-212ENST00000604599 METTL5Q9NRN9 209 aaKnown RBP13.33□□□□□ -0.28
CDCA3-212ENST00000604599 SCOCQ9UIL1 159 aa13.33□□□□□ -0.28
CDCA3-212ENST00000604599 ATP5HO75947 161 aa13.33□□□□□ -0.28
CDCA3-212ENST00000604599 HSPA6P17066 643 aa13.33□□□□□ -0.28
CDCA3-212ENST00000604599 TNFAIP3P21580 790 aa13.33□□□□□ -0.28
CDCA3-212ENST00000604599 KCNA1Q09470 495 aa13.33□□□□□ -0.28
CDCA3-212ENST00000604599 TRIP13Q15645 432 aaPredicted RBP13.33□□□□□ -0.28
CDCA3-212ENST00000604599 ZC3H12AQ5D1E8 599 aaKnown RBP13.33□□□□□ -0.28
CDCA3-212ENST00000604599 CMPK2Q5EBM0 449 aa13.33□□□□□ -0.28
CDCA3-212ENST00000604599 RFWD3Q6PCD5 774 aa13.33□□□□□ -0.28
CDCA3-212ENST00000604599 PRUNE1Q86TP1 453 aa13.33□□□□□ -0.28
CDCA3-212ENST00000604599 ASIC3Q9UHC3 531 aa13.33□□□□□ -0.28
CDCA3-212ENST00000604599 DNAJC12Q9UKB3 198 aa13.33□□□□□ -0.28
CDCA3-212ENST00000604599 G3BP2Q9UN86 482 aaKnown RBP13.33□□□□□ -0.28
CDCA3-212ENST00000604599 TRAF3IP3Q9Y228 551 aa13.33□□□□□ -0.28
CDCA3-212ENST00000604599 SH3BP1Q9Y3L3 701 aa13.33□□□□□ -0.28
CDCA3-212ENST00000604599 SCN7AQ01118 1682 aa13.32□□□□□ -0.28
CDCA3-212ENST00000604599 KDM3AQ9Y4C1 1321 aa13.32□□□□□ -0.28
CDCA3-212ENST00000604599 TP73O15350 636 aa13.32□□□□□ -0.28
CDCA3-212ENST00000604599 THAP12O43422 761 aa13.32□□□□□ -0.28
CDCA3-212ENST00000604599 SPAG7O75391 227 aa13.32□□□□□ -0.28
CDCA3-212ENST00000604599 ECEL1O95672 775 aa13.32□□□□□ -0.28
CDCA3-212ENST00000604599 DLATP10515 647 aaKnown RBP13.32□□□□□ -0.28
CDCA3-212ENST00000604599 IL6STP40189 918 aaPredicted RBP13.32□□□□□ -0.28
CDCA3-212ENST00000604599 STAT3P40763 770 aa13.32□□□□□ -0.28
CDCA3-212ENST00000604599 CLUL1Q15846 466 aa13.32□□□□□ -0.28
CDCA3-212ENST00000604599 ZNF568Q3ZCX4 644 aa13.32□□□□□ -0.28
CDCA3-212ENST00000604599 KHDC1Q4VXA5 237 aaKnown RBP13.32□□□□□ -0.28
CDCA3-212ENST00000604599 RBM26Q5T8P6 1007 aaKnown RBP13.32□□□□□ -0.28
CDCA3-212ENST00000604599 IRGCQ6NXR0 463 aa13.32□□□□□ -0.28
CDCA3-212ENST00000604599 INPP5DQ92835 1189 aa13.32□□□□□ -0.28
CDCA3-212ENST00000604599 GRAMD1AQ96CP6 724 aa13.32□□□□□ -0.28
CDCA3-212ENST00000604599 IFT43Q96FT9 208 aa13.32□□□□□ -0.28
CDCA3-212ENST00000604599 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.32□□□□□ -0.28
CDCA3-212ENST00000604599 PHTF1Q9UMS5 762 aa13.32□□□□□ -0.28
CDCA3-212ENST00000604599 USH1CQ9Y6N9 552 aa13.32□□□□□ -0.28
CDCA3-212ENST00000604599 ESYT2A0FGR8 921 aa13.32□□□□□ -0.28
CDCA3-212ENST00000604599 ANKRD62A6NC57 917 aa13.32□□□□□ -0.28
CDCA3-212ENST00000604599 USP17L5A8MUK1 530 aa13.32□□□□□ -0.28
CDCA3-212ENST00000604599 ATMINO43313 823 aaPredicted RBP13.32□□□□□ -0.28
CDCA3-212ENST00000604599 BAG3O95817 575 aa13.32□□□□□ -0.28
CDCA3-212ENST00000604599 COMTP21964 271 aa13.32□□□□□ -0.28
CDCA3-212ENST00000604599 KCNA3P22001 575 aa13.32□□□□□ -0.28
CDCA3-212ENST00000604599 VPS41P49754 854 aa13.32□□□□□ -0.28
CDCA3-212ENST00000604599 YARSP54577 528 aaKnown RBP13.32□□□□□ -0.28
CDCA3-212ENST00000604599 WDR4P57081 412 aaKnown RBP13.32□□□□□ -0.28
CDCA3-212ENST00000604599 KRT17Q04695 432 aa13.32□□□□□ -0.28
CDCA3-212ENST00000604599 C3orf67Q6ZVT6 689 aa13.32□□□□□ -0.28
CDCA3-212ENST00000604599 MIGA2Q7L4E1 593 aa13.32□□□□□ -0.28
CDCA3-212ENST00000604599 CYFIP1Q7L576 1253 aa13.32□□□□□ -0.28
CDCA3-212ENST00000604599 APLFQ8IW19 511 aaPredicted RBP13.32□□□□□ -0.28
CDCA3-212ENST00000604599 MEIS1O00470 390 aa13.31□□□□□ -0.28
CDCA3-212ENST00000604599 MAPK13O15264 365 aa13.31□□□□□ -0.28
CDCA3-212ENST00000604599 ATP9AO75110 1047 aa13.31□□□□□ -0.28
CDCA3-212ENST00000604599 TTC4O95801 387 aa13.31□□□□□ -0.28
CDCA3-212ENST00000604599 CHRNB2P17787 502 aa13.31□□□□□ -0.28
CDCA3-212ENST00000604599 ATF3P18847 181 aa13.31□□□□□ -0.28
CDCA3-212ENST00000604599 IL9RQ01113 521 aa13.31□□□□□ -0.28
CDCA3-212ENST00000604599 PABPC4Q13310 644 aaKnown RBP eCLIP13.31□□□□□ -0.28
CDCA3-212ENST00000604599 CCNJLQ8IV13 435 aa13.31□□□□□ -0.28
CDCA3-212ENST00000604599 TGFBRAP1Q8WUH2 860 aa13.31□□□□□ -0.28
CDCA3-212ENST00000604599 C1orf54Q8WWF1 131 aa13.31□□□□□ -0.28
CDCA3-212ENST00000604599 BORCS6Q96GS4 357 aa13.31□□□□□ -0.28
CDCA3-212ENST00000604599 DCLRE1BQ9H816 532 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms