RNA–Protein interactions for RNA: ENST00000604516.1

HMGN3-AS1-201, HMGN3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene HMGN3-AS1, Length 2,946 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-AS1-201ENST00000604516 CEP170P1Q96L14 293 aa12.74□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 PFASO15067 1338 aa12.74□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 ADGRA3Q8IWK6 1321 aa12.74□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 MAPTP10636 758 aaKnown RBP12.74□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 CHRNB2P17787 502 aa12.74□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 NCKAP1LP55160 1127 aa12.74□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 GHRHRQ02643 423 aa12.74□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 PDCLQ13371 301 aa12.74□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 TNFAIP1Q13829 316 aa12.74□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 UAP1Q16222 522 aaPredicted RBP12.74□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 CEP85LQ5SZL2 805 aa12.74□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 SWSAP1Q6NVH7 229 aa12.74□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 NLRX1Q86UT6 975 aa12.74□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 VSIG10LQ86VR7 867 aa12.74□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 PI4K2AQ9BTU6 479 aa12.74□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 IVLP07476 585 aa12.73□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 MMEP08473 750 aa12.73□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 HSD17B3P37058 310 aa12.73□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 BACE1P56817 501 aa12.73□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 DMP1Q13316 513 aaPredicted RBP12.73□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 MESDQ14696 234 aa12.73□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 SLC39A4Q6P5W5 647 aa12.73□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 TAS1R2Q8TE23 839 aa12.73□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 EPS8L1Q8TE68 723 aa12.73□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 MOV10L1Q9BXT6 1211 aaKnown RBP12.73□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 KMT5AQ9NQR1 393 aa12.73□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 CNOT7Q9UIV1 285 aaKnown RBP12.73□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 PCDHA10Q9Y5I2 948 aa12.73□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 SHOX2O60902 331 aaPredicted RBP12.73□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 ALCAMQ13740 583 aa12.73□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 DALRD3Q5D0E6 543 aaKnown RBP12.73□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 LMBRD2Q68DH5 695 aaPredicted RBP12.73□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 AEBP2Q6ZN18 517 aaPredicted RBP12.73□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 C12orf56Q8IXR9 622 aa12.73□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 MREGQ8N565 214 aa12.73□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 PARD3BQ8TEW8 1205 aa12.73□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 WRNIP1Q96S55 665 aa12.73□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 CCDC188H7C350 402 aa12.72□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 ZEB2O60315 1214 aa12.72□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 HSPA9P38646 679 aaKnown RBP12.72□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 JAK3P52333 1124 aa12.72□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 SMTNP53814 917 aa12.72□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 ZNF280AP59817 542 aaPredicted RBP12.72□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 KRT76Q01546 638 aa12.72□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 PRKG1Q13976 671 aa12.72□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 POMGNT1Q8WZA1 660 aa12.72□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 TATDN2Q93075 761 aa12.72□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 LRRC4CQ9HCJ2 640 aa12.72□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 NOCTQ9UK39 431 aaKnown RBP12.72□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 RRP15Q9Y3B9 282 aaKnown RBP12.72□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 GRIN2DO15399 1336 aa12.72□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 POU5F1Q01860 360 aaKnown RBP12.72□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 GUCY1A3Q02108 690 aa12.72□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 MKRN4PQ13434 485 aaPredicted RBP12.72□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 CUL1Q13616 776 aa12.72□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 SRLQ86TD4 932 aa12.72□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 C10orf67Q8IYJ2 551 aa12.72□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 FAM71AQ8IYT1 594 aa12.72□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 MYO1CO00159 1063 aa12.72□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 HNRNPDLO14979 420 aaKnown RBP12.72□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 PPFIA4O75335 1185 aa12.72□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 SFNP31947 248 aa12.72□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 HPDP32754 393 aaPredicted RBP12.72□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 CCT5P48643 541 aa12.72□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 IRX5P78411 483 aaPredicted RBP12.72□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 CYFIP1Q7L576 1253 aa12.72□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 PHLDB2Q86SQ0 1253 aa12.72□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 CCDC60Q8IWA6 550 aaPredicted RBP12.72□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 ZDHHC14Q8IZN3 488 aa12.72□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 BCAS4Q8TDM0 211 aa12.72□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 UBLCP1Q8WVY7 318 aaPredicted RBP12.72□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 VPS33BQ9H267 617 aa12.72□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 ST6GALNAC4Q9H4F1 302 aa12.72□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 ATP8B3O60423 1300 aa12.71□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 DOCK5Q9H7D0 1870 aa12.71□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 TULP2O00295 520 aa12.71□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 PTPRAP18433 802 aa12.71□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 COMTP21964 271 aa12.71□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 RFX1P22670 979 aa12.71□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 GPC5P78333 572 aa12.71□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 FMO1Q01740 532 aa12.71□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 FSTL1Q12841 308 aa12.71□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 TMEM132BQ14DG7 1078 aa12.71□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 KRT39Q6A163 491 aa12.71□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 MAP4K3Q8IVH8 894 aa12.71□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 ZNF280CQ8ND82 737 aa12.71□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 CCDC26Q8TAB7 109 aa12.71□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 CARD9Q9H257 536 aa12.71□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 ANKEF1Q9NU02 776 aa12.71□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 SEPT9Q9UHD8 586 aaPredicted RBP12.71□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 ZNF214Q9UL59 606 aaPredicted RBP12.71□□□□□ -0.37
HMGN3-AS1-201ENST00000604516 TCRBV7S2A1N4TA0A589 114 aa12.71□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 P4HA2O15460 535 aa12.71□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 KCNA2P16389 499 aa12.71□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 CCND2P30279 289 aa12.71□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 CTNNA1P35221 906 aaKnown RBP12.71□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 C2CD6Q53TS8 623 aa12.71□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 DLK2Q6UY11 383 aa12.71□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 SV2AQ7L0J3 742 aa12.71□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 HELQQ8TDG4 1101 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms