RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 CCDC148Q8NFR7 591 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 COL22A1Q8NFW1 1626 aaPredicted RBP5.08□□□□□ -1.6
LINC01109-201ENST00000603837 TPCN2Q8NHX9 752 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 NAF1Q96HR8 494 aaKnown RBP5.08□□□□□ -1.6
LINC01109-201ENST00000603837 DHTKD1Q96HY7 919 aaPredicted RBP5.08□□□□□ -1.6
LINC01109-201ENST00000603837 ANKRD27Q96NW4 1050 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 PUS3Q9BZE2 481 aaKnown RBP5.08□□□□□ -1.6
LINC01109-201ENST00000603837 OSBPL7Q9BZF2 842 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 UPF3BQ9BZI7 483 aaKnown RBP5.08□□□□□ -1.6
LINC01109-201ENST00000603837 FOXP3Q9BZS1 431 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 UNKQ9C0B0 810 aaKnown RBP5.08□□□□□ -1.6
LINC01109-201ENST00000603837 FTOQ9C0B1 505 aaKnown RBP eCLIP5.08□□□□□ -1.6
LINC01109-201ENST00000603837 CDH19Q9H159 772 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 GOLPH3LQ9H4A5 285 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 NLRC4Q9NPP4 1024 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.08□□□□□ -1.6
LINC01109-201ENST00000603837 NFKBIL1Q9UBC1 381 aaPredicted RBP5.08□□□□□ -1.6
LINC01109-201ENST00000603837 FAM184BQ9ULE4 1060 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 PNMA8BQ9ULN7 279 aaPredicted RBP5.08□□□□□ -1.6
LINC01109-201ENST00000603837 CARD8Q9Y2G2 431 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 TUBGCP6Q96RT7 1819 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 NHSL1Q5SYE7 1610 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 CD163L1Q9NR16 1453 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 ABCC11Q96J66 1382 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 LACTBL1A8MY62 500 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 PFKFB2O60825 505 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 SNX4O95219 450 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 IL2RAP01589 272 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 INHAP05111 366 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 CTSHP09668 335 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 HSPA8P11142 646 aaKnown RBP5.07□□□□□ -1.6
LINC01109-201ENST00000603837 SNRPBP14678 240 aaKnown RBP5.07□□□□□ -1.6
LINC01109-201ENST00000603837 SDSP20132 328 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 CPT1AP50416 773 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 MYL6P60660 151 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 GSTM4Q03013 218 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 NFIAQ12857 509 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 SEPT6Q14141 434 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 PTGISQ16647 500 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 SPRED3Q2MJR0 410 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 ANKRD20A2Q5SQ80 823 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 ANKRD20A1Q5TYW2 823 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 ANKRD20A3Q5VUR7 823 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 CCDC102BQ68D86 513 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 ANO7Q6IWH7 933 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 SESTD1Q86VW0 696 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 CCDC63Q8NA47 563 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 DNAJB8Q8NHS0 232 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 ATXN2LQ8WWM7 1075 aaKnown RBP5.07□□□□□ -1.6
LINC01109-201ENST00000603837 FATE1Q969F0 183 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 ZNF845Q96IR2 970 aaPredicted RBP5.07□□□□□ -1.6
LINC01109-201ENST00000603837 SNX27Q96L92 541 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 CDK19Q9BWU1 502 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 VCXQ9H320 206 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 TCF7L2Q9NQB0 619 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 INIPQ9NRY2 104 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 TBC1D22BQ9NU19 505 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 MCM9Q9NXL9 1143 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 OBP2AQ9NY56 170 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 GGA3Q9NZ52 723 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 DKK3Q9UBP4 350 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 ZBTB21Q9ULJ3 1066 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 KIAA1024Q9UPX6 916 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 CHMP2BQ9UQN3 213 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 MTMR6Q9Y217 621 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 TMEM2Q9UHN6 1383 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 IQCA1LA6NCM1 817 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 ZBTB7BO15156 539 aaPredicted RBP5.07□□□□□ -1.6
LINC01109-201ENST00000603837 HNRNPRO43390 633 aaKnown RBP5.07□□□□□ -1.6
LINC01109-201ENST00000603837 FAM107AO95990 144 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 SP100P23497 879 aaPredicted RBP5.07□□□□□ -1.6
LINC01109-201ENST00000603837 CCND1P24385 295 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 PMS2P54278 862 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 MAP3K12Q12852 859 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 PIN1Q13526 163 aaPredicted RBP5.07□□□□□ -1.6
LINC01109-201ENST00000603837 ANKDD1AQ495B1 522 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 SLC27A3Q5K4L6 730 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 GKAP1Q5VSY0 366 aaPredicted RBP5.07□□□□□ -1.6
LINC01109-201ENST00000603837 RNF220Q5VTB9 566 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 TMEM154Q6P9G4 183 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 SLC2A7Q6PXP3 512 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.07□□□□□ -1.6
LINC01109-201ENST00000603837 RSPH3Q86UC2 560 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 LRRC49Q8IUZ0 686 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 NRSN1Q8IZ57 195 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 PJA1Q8NG27 643 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 KLHDC4Q8TBB5 520 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 WDR60Q8WVS4 1066 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 P3H4Q92791 437 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 ABTB1Q969K4 478 aaPredicted RBP5.07□□□□□ -1.6
LINC01109-201ENST00000603837 GMCL1Q96IK5 515 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 MAML3Q96JK9 1138 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 MAELQ96JY0 434 aaKnown RBP5.07□□□□□ -1.6
LINC01109-201ENST00000603837 GDAP1L1Q96MZ0 367 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 SYT15Q9BQS2 421 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 HERPUD2Q9BSE4 406 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 FSD1Q9BTV5 496 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 APOL5Q9BWW9 433 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 MOV10L1Q9BXT6 1211 aaKnown RBP5.07□□□□□ -1.6
LINC01109-201ENST00000603837 EIF2AQ9BY44 585 aaKnown RBP5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms