RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 NBPF20Q3BBV1 942 aa10.17□□□□□ -0.78
CSMD1-217ENST00000602723 EEPD1Q7L9B9 569 aa10.17□□□□□ -0.78
CSMD1-217ENST00000602723 FAM49AQ9H0Q0 323 aaPredicted RBP10.17□□□□□ -0.78
CSMD1-217ENST00000602723 BTNL9Q6UXG8 535 aa10.16□□□□□ -0.78
CSMD1-217ENST00000602723 BLOC1S6Q9UL45 172 aa10.16□□□□□ -0.78
CSMD1-217ENST00000602723 RPAP1Q9BWH6 1393 aaPredicted RBP10.16□□□□□ -0.78
CSMD1-217ENST00000602723 LOC102724159A0A0B4J2E5 919 aa10.16□□□□□ -0.78
CSMD1-217ENST00000602723 APOL1O14791 398 aa10.16□□□□□ -0.78
CSMD1-217ENST00000602723 WBP4O75554 376 aaKnown RBP10.16□□□□□ -0.78
CSMD1-217ENST00000602723 PWP2Q15269 919 aaKnown RBP10.16□□□□□ -0.78
CSMD1-217ENST00000602723 NUP93Q8N1F7 819 aa10.16□□□□□ -0.78
CSMD1-217ENST00000602723 SP110Q9HB58 689 aa10.16□□□□□ -0.78
CSMD1-217ENST00000602723 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.16□□□□□ -0.78
CSMD1-217ENST00000602723 PLEKHG1Q9ULL1 1385 aa10.16□□□□□ -0.78
CSMD1-217ENST00000602723 LARGE1O95461 756 aa10.16□□□□□ -0.78
CSMD1-217ENST00000602723 FTLP02792 175 aaPredicted RBP10.16□□□□□ -0.78
CSMD1-217ENST00000602723 TEX9Q8N6V9 391 aa10.16□□□□□ -0.78
CSMD1-217ENST00000602723 DCAF4Q8WV16 495 aa10.16□□□□□ -0.78
CSMD1-217ENST00000602723 MRPL1Q9BYD6 325 aaKnown RBP10.16□□□□□ -0.78
CSMD1-217ENST00000602723 KDM4CQ9H3R0 1056 aa10.16□□□□□ -0.78
CSMD1-217ENST00000602723 TBX22Q9Y458 520 aa10.16□□□□□ -0.78
CSMD1-217ENST00000602723 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.16□□□□□ -0.78
CSMD1-217ENST00000602723 SYNDIG1LA6NDD5 238 aa10.16□□□□□ -0.78
CSMD1-217ENST00000602723 KCNA2P16389 499 aa10.16□□□□□ -0.78
CSMD1-217ENST00000602723 CDH2P19022 906 aaPredicted RBP10.16□□□□□ -0.78
CSMD1-217ENST00000602723 TMED10P49755 219 aaKnown RBP10.16□□□□□ -0.78
CSMD1-217ENST00000602723 ARSEP51690 589 aa10.16□□□□□ -0.78
CSMD1-217ENST00000602723 SFR1Q86XK3 245 aa10.16□□□□□ -0.78
CSMD1-217ENST00000602723 C11orf70Q9BRQ4 267 aa10.16□□□□□ -0.78
CSMD1-217ENST00000602723 GOLPH3LQ9H4A5 285 aa10.16□□□□□ -0.78
CSMD1-217ENST00000602723 ZFATQ9P243 1243 aa10.16□□□□□ -0.78
CSMD1-217ENST00000602723 TSC22D4Q9Y3Q8 395 aa10.16□□□□□ -0.78
CSMD1-217ENST00000602723 TYK2P29597 1187 aa10.16□□□□□ -0.78
CSMD1-217ENST00000602723 DRAP1Q14919 205 aaPredicted RBP10.16□□□□□ -0.78
CSMD1-217ENST00000602723 IZUMO3Q5VZ72 239 aa10.16□□□□□ -0.78
CSMD1-217ENST00000602723 PI16Q6UXB8 463 aa10.16□□□□□ -0.78
CSMD1-217ENST00000602723 LRRC31Q6UY01 552 aa10.16□□□□□ -0.78
CSMD1-217ENST00000602723 PI4KBQ9UBF8 816 aa10.16□□□□□ -0.78
CSMD1-217ENST00000602723 HSPA1AP0DMV8 641 aaKnown RBP10.16□□□□□ -0.78
CSMD1-217ENST00000602723 HSPA1BP0DMV9 641 aaKnown RBP10.16□□□□□ -0.78
CSMD1-217ENST00000602723 TRIM72Q6ZMU5 477 aa10.16□□□□□ -0.78
CSMD1-217ENST00000602723 SPATA21Q7Z572 469 aa10.16□□□□□ -0.78
CSMD1-217ENST00000602723 LONP2Q86WA8 852 aa10.16□□□□□ -0.78
CSMD1-217ENST00000602723 MCPH1Q8NEM0 835 aa10.16□□□□□ -0.78
CSMD1-217ENST00000602723 RNF25Q96BH1 459 aaPredicted RBP10.16□□□□□ -0.78
CSMD1-217ENST00000602723 ZNF341Q9BYN7 854 aa10.16□□□□□ -0.78
CSMD1-217ENST00000602723 STK36Q9NRP7 1315 aa10.16□□□□□ -0.78
CSMD1-217ENST00000602723 EIF2AK2P19525 551 aaKnown RBP10.16□□□□□ -0.78
CSMD1-217ENST00000602723 VCPP55072 806 aaKnown RBP10.16□□□□□ -0.78
CSMD1-217ENST00000602723 BFARQ9NZS9 450 aa10.16□□□□□ -0.78
CSMD1-217ENST00000602723 PFASO15067 1338 aa10.16□□□□□ -0.78
CSMD1-217ENST00000602723 M0QYV0 167 aa10.16□□□□□ -0.78
CSMD1-217ENST00000602723 CLDN3O15551 220 aa10.16□□□□□ -0.78
CSMD1-217ENST00000602723 LDHAP00338 332 aaKnown RBP10.16□□□□□ -0.78
CSMD1-217ENST00000602723 PHKA2P46019 1235 aa10.16□□□□□ -0.78
CSMD1-217ENST00000602723 RAD54LQ92698 747 aa10.16□□□□□ -0.78
CSMD1-217ENST00000602723 OSBP2Q969R2 916 aa10.16□□□□□ -0.78
CSMD1-217ENST00000602723 ALG13Q9NP73 1137 aaKnown RBP10.16□□□□□ -0.78
CSMD1-217ENST00000602723 MEFVO15553 781 aaPredicted RBP10.15□□□□□ -0.78
CSMD1-217ENST00000602723 KRT17Q04695 432 aa10.15□□□□□ -0.78
CSMD1-217ENST00000602723 DSTYKQ6XUX3 929 aa10.15□□□□□ -0.78
CSMD1-217ENST00000602723 TEKT4Q8WW24 435 aa10.15□□□□□ -0.78
CSMD1-217ENST00000602723 CASS4Q9NQ75 786 aa10.15□□□□□ -0.78
CSMD1-217ENST00000602723 PCSK1NQ9UHG2 260 aa10.15□□□□□ -0.78
CSMD1-217ENST00000602723 PTCH1Q13635 1447 aa10.15□□□□□ -0.78
CSMD1-217ENST00000602723 CASP1P29466 404 aa10.15□□□□□ -0.78
CSMD1-217ENST00000602723 RHPN2Q8IUC4 686 aa10.15□□□□□ -0.78
CSMD1-217ENST00000602723 KIAA1586Q9HCI6 787 aa10.15□□□□□ -0.78
CSMD1-217ENST00000602723 STAP1Q9ULZ2 295 aa10.15□□□□□ -0.78
CSMD1-217ENST00000602723 ELF1P32519 619 aa10.15□□□□□ -0.78
CSMD1-217ENST00000602723 BCAR1P56945 870 aa10.15□□□□□ -0.78
CSMD1-217ENST00000602723 ABCE1P61221 599 aaKnown RBP10.15□□□□□ -0.78
CSMD1-217ENST00000602723 PRAMEP78395 509 aa10.15□□□□□ -0.78
CSMD1-217ENST00000602723 AARS2Q5JTZ9 985 aaKnown RBP10.15□□□□□ -0.78
CSMD1-217ENST00000602723 FBXW10Q5XX13 1052 aa10.15□□□□□ -0.78
CSMD1-217ENST00000602723 FLAD1Q8NFF5 587 aa10.15□□□□□ -0.78
CSMD1-217ENST00000602723 GIMAP4Q9NUV9 329 aa10.15□□□□□ -0.78
CSMD1-217ENST00000602723 TSR3Q9UJK0 312 aaKnown RBP10.15□□□□□ -0.78
CSMD1-217ENST00000602723 ENO4A6NNW6 628 aa10.15□□□□□ -0.78
CSMD1-217ENST00000602723 ARIH2O95376 493 aa10.15□□□□□ -0.78
CSMD1-217ENST00000602723 ATP1A1P05023 1023 aaKnown RBP10.15□□□□□ -0.78
CSMD1-217ENST00000602723 DPY19L2Q6NUT2 758 aa10.15□□□□□ -0.78
CSMD1-217ENST00000602723 POTEAQ6S8J7 498 aa10.15□□□□□ -0.78
CSMD1-217ENST00000602723 PADI6Q6TGC4 694 aa10.15□□□□□ -0.78
CSMD1-217ENST00000602723 CATSPER4Q7RTX7 472 aa10.15□□□□□ -0.78
CSMD1-217ENST00000602723 CDKL3Q8IVW4 592 aaPredicted RBP10.15□□□□□ -0.78
CSMD1-217ENST00000602723 C1orf54Q8WWF1 131 aa10.15□□□□□ -0.78
CSMD1-217ENST00000602723 CCT8L2Q96SF2 557 aa10.15□□□□□ -0.78
CSMD1-217ENST00000602723 USP27XA6NNY8 438 aa10.15□□□□□ -0.78
CSMD1-217ENST00000602723 SFI1A8K8P3 1242 aa10.15□□□□□ -0.78
CSMD1-217ENST00000602723 GNA15P30679 374 aa10.15□□□□□ -0.78
CSMD1-217ENST00000602723 RASGRF1Q13972 1273 aa10.15□□□□□ -0.78
CSMD1-217ENST00000602723 DAB2IPQ5VWQ8 1189 aa10.15□□□□□ -0.78
CSMD1-217ENST00000602723 EME1Q96AY2 570 aa10.15□□□□□ -0.78
CSMD1-217ENST00000602723 SEPT3Q9UH03 358 aa10.15□□□□□ -0.78
CSMD1-217ENST00000602723 RHOT1Q8IXI2 618 aa10.15□□□□□ -0.78
CSMD1-217ENST00000602723 MAD2L2Q9UI95 211 aa10.15□□□□□ -0.78
CSMD1-217ENST00000602723 TET3O43151 1660 aa10.15□□□□□ -0.78
CSMD1-217ENST00000602723 CDK8P49336 464 aa10.15□□□□□ -0.78
CSMD1-217ENST00000602723 TNFAIP2Q03169 654 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms