RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 B3GNT9Q6UX72 402 aa17.98■□□□□ 0.47
SSBP4-211ENST00000601614 GLYCTKQ8IVS8 523 aa17.98■□□□□ 0.47
SSBP4-211ENST00000601614 SMG8Q8ND04 991 aaKnown RBP17.98■□□□□ 0.47
SSBP4-211ENST00000601614 CCDC136Q96JN2 1154 aa17.98■□□□□ 0.47
SSBP4-211ENST00000601614 TEKT3Q9BXF9 490 aa17.98■□□□□ 0.47
SSBP4-211ENST00000601614 PIDD1Q9HB75 910 aa17.98■□□□□ 0.47
SSBP4-211ENST00000601614 MIOSQ9NXC5 875 aa17.98■□□□□ 0.47
SSBP4-211ENST00000601614 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.98■□□□□ 0.479e-7■■■■□ 19.7
SSBP4-211ENST00000601614 ARID2Q68CP9 1835 aa17.98■□□□□ 0.47
SSBP4-211ENST00000601614 TGM5O43548 720 aa17.97■□□□□ 0.47
SSBP4-211ENST00000601614 OR1G1P47890 313 aa17.97■□□□□ 0.47
SSBP4-211ENST00000601614 DSC1Q08554 894 aa17.97■□□□□ 0.47
SSBP4-211ENST00000601614 SNW1Q13573 536 aaKnown RBP17.97■□□□□ 0.47
SSBP4-211ENST00000601614 PLA2G4FQ68DD2 849 aa17.97■□□□□ 0.47
SSBP4-211ENST00000601614 LILRA6Q6PI73 481 aa17.97■□□□□ 0.47
SSBP4-211ENST00000601614 PARM1Q6UWI2 310 aa17.97■□□□□ 0.47
SSBP4-211ENST00000601614 ANO5Q75V66 913 aa17.97■□□□□ 0.47
SSBP4-211ENST00000601614 MIER3Q7Z3K6 550 aa17.97■□□□□ 0.47
SSBP4-211ENST00000601614 DDX23Q9BUQ8 820 aaKnown RBP17.97■□□□□ 0.47
SSBP4-211ENST00000601614 RNF39Q9H2S5 420 aa17.97■□□□□ 0.47
SSBP4-211ENST00000601614 CHST7Q9NS84 486 aa17.97■□□□□ 0.47
SSBP4-211ENST00000601614 KANSL3Q9P2N6 904 aa17.97■□□□□ 0.47
SSBP4-211ENST00000601614 NCDNQ9UBB6 729 aa17.97■□□□□ 0.47
SSBP4-211ENST00000601614 CNTNAP2Q9UHC6 1331 aa17.97■□□□□ 0.47
SSBP4-211ENST00000601614 GAS2O43903 313 aaKnown RBP17.96■□□□□ 0.47
SSBP4-211ENST00000601614 DHX32Q7L7V1 743 aaKnown RBP17.96■□□□□ 0.47
SSBP4-211ENST00000601614 RASEFQ8IZ41 740 aa17.96■□□□□ 0.47
SSBP4-211ENST00000601614 ZNF579Q8NAF0 562 aaKnown RBP17.96■□□□□ 0.47
SSBP4-211ENST00000601614 HDAC7Q8WUI4 952 aa17.96■□□□□ 0.47
SSBP4-211ENST00000601614 PRKD2Q9BZL6 878 aa17.96■□□□□ 0.47
SSBP4-211ENST00000601614 ANO2Q9NQ90 1003 aa17.96■□□□□ 0.47
SSBP4-211ENST00000601614 DPP7Q9UHL4 492 aa17.96■□□□□ 0.47
SSBP4-211ENST00000601614 SSX2IPQ9Y2D8 614 aa17.96■□□□□ 0.47
SSBP4-211ENST00000601614 CHD8Q9HCK8 2581 aa17.95■□□□□ 0.46
SSBP4-211ENST00000601614 KANSL1LA0AUZ9 987 aa17.95■□□□□ 0.46
SSBP4-211ENST00000601614 DDX11L8A8MPP1 907 aa17.95■□□□□ 0.46
SSBP4-211ENST00000601614 RPL17P18621 184 aaKnown RBP17.95■□□□□ 0.46
SSBP4-211ENST00000601614 NCLP19338 710 aaKnown RBP17.95■□□□□ 0.46
SSBP4-211ENST00000601614 TGM1P22735 817 aa17.95■□□□□ 0.46
SSBP4-211ENST00000601614 NPEPPSP55786 919 aa17.95■□□□□ 0.46
SSBP4-211ENST00000601614 NTHL1P78549 312 aa17.95■□□□□ 0.46
SSBP4-211ENST00000601614 ZNF528Q3MIS6 628 aa17.95■□□□□ 0.46
SSBP4-211ENST00000601614 RDM1Q8NG50 284 aa17.95■□□□□ 0.46
SSBP4-211ENST00000601614 GAD1Q99259 594 aa17.95■□□□□ 0.46
SSBP4-211ENST00000601614 EIF2AQ9BY44 585 aaKnown RBP17.95■□□□□ 0.46
SSBP4-211ENST00000601614 GPR62Q9BZJ7 368 aa17.95■□□□□ 0.46
SSBP4-211ENST00000601614 PLEKHA4Q9H4M7 779 aa17.95■□□□□ 0.46
SSBP4-211ENST00000601614 SPATA6Q9NWH7 488 aaPredicted RBP17.95■□□□□ 0.46
SSBP4-211ENST00000601614 ZDHHC7Q9NXF8 308 aa17.95■□□□□ 0.46
SSBP4-211ENST00000601614 COL4A3BPQ9Y5P4 624 aa17.95■□□□□ 0.46
SSBP4-211ENST00000601614 VWA8A3KMH1 1905 aa17.94■□□□□ 0.46
SSBP4-211ENST00000601614 SPTLC1O15269 473 aa17.94■□□□□ 0.46
SSBP4-211ENST00000601614 CD72P21854 359 aa17.94■□□□□ 0.46
SSBP4-211ENST00000601614 GNA11P29992 359 aa17.94■□□□□ 0.46
SSBP4-211ENST00000601614 MLH1P40692 756 aa17.94■□□□□ 0.46
SSBP4-211ENST00000601614 SCNN1GP51170 649 aa17.94■□□□□ 0.46
SSBP4-211ENST00000601614 CSTF1Q05048 431 aaKnown RBP17.94■□□□□ 0.46
SSBP4-211ENST00000601614 ELMSAN1Q6PJG2 1045 aa17.94■□□□□ 0.46
SSBP4-211ENST00000601614 ZBTB44Q8NCP5 570 aa17.94■□□□□ 0.46
SSBP4-211ENST00000601614 PHKBQ93100 1093 aa17.94■□□□□ 0.46
SSBP4-211ENST00000601614 ZFP42Q96MM3 310 aa17.94■□□□□ 0.46
SSBP4-211ENST00000601614 FBXO4Q9UKT5 387 aa17.94■□□□□ 0.46
SSBP4-211ENST00000601614 NAP1L2Q9ULW6 460 aaPredicted RBP17.94■□□□□ 0.46
SSBP4-211ENST00000601614 HES2Q9Y543 173 aa17.94■□□□□ 0.46
SSBP4-211ENST00000601614 IPPQ9Y573 584 aa17.94■□□□□ 0.46
SSBP4-211ENST00000601614 USP24Q9UPU5 2620 aa17.94■□□□□ 0.46
SSBP4-211ENST00000601614 DCDC2BA2VCK2 349 aa17.93■□□□□ 0.46
SSBP4-211ENST00000601614 ARL5CA6NH57 179 aa17.93■□□□□ 0.46
SSBP4-211ENST00000601614 PRPF3O43395 683 aaKnown RBP17.93■□□□□ 0.46
SSBP4-211ENST00000601614 LAMTOR5O43504 91 aa17.93■□□□□ 0.46
SSBP4-211ENST00000601614 ZMYND10O75800 440 aa17.93■□□□□ 0.46
SSBP4-211ENST00000601614 TDP2O95551 362 aa17.93■□□□□ 0.46
SSBP4-211ENST00000601614 SRGAP2CP0DJJ0 459 aa17.93■□□□□ 0.46
SSBP4-211ENST00000601614 ITGA4P13612 1032 aa17.93■□□□□ 0.46
SSBP4-211ENST00000601614 FSHRP23945 695 aa17.93■□□□□ 0.46
SSBP4-211ENST00000601614 USP11P51784 963 aa17.93■□□□□ 0.46
SSBP4-211ENST00000601614 RCAN1P53805 252 aa17.93■□□□□ 0.46
SSBP4-211ENST00000601614 UBXN2BQ14CS0 331 aa17.93■□□□□ 0.46
SSBP4-211ENST00000601614 MLF2Q15773 248 aaPredicted RBP17.93■□□□□ 0.46
SSBP4-211ENST00000601614 FUT10Q6P4F1 479 aa17.93■□□□□ 0.46
SSBP4-211ENST00000601614 GRASPQ7Z6J2 395 aaPredicted RBP17.93■□□□□ 0.46
SSBP4-211ENST00000601614 CCDC12Q8WUD4 166 aaPredicted RBP17.93■□□□□ 0.46
SSBP4-211ENST00000601614 PRPF31Q8WWY3 499 aaKnown RBP17.93■□□□□ 0.46
SSBP4-211ENST00000601614 RABGGTAQ92696 567 aa17.93■□□□□ 0.46
SSBP4-211ENST00000601614 TMEM143Q96AN5 459 aa17.93■□□□□ 0.46
SSBP4-211ENST00000601614 SHDQ96IW2 340 aa17.93■□□□□ 0.46
SSBP4-211ENST00000601614 MBOAT7Q96N66 472 aa17.93■□□□□ 0.46
SSBP4-211ENST00000601614 PARD6AQ9NPB6 346 aa17.93■□□□□ 0.46
SSBP4-211ENST00000601614 BMP2KQ9NSY1 1161 aaPredicted RBP17.93■□□□□ 0.46
SSBP4-211ENST00000601614 VPS54Q9P1Q0 977 aa17.93■□□□□ 0.46
SSBP4-211ENST00000601614 SMG5Q9UPR3 1016 aaKnown RBP17.93■□□□□ 0.46
SSBP4-211ENST00000601614 CACNA1GO43497 2377 aa17.93■□□□□ 0.46
SSBP4-211ENST00000601614 LILRB5O75023 590 aa17.92■□□□□ 0.46
SSBP4-211ENST00000601614 Q4G0T1 1027 aa17.92■□□□□ 0.46
SSBP4-211ENST00000601614 SLC44A4Q53GD3 710 aa17.92■□□□□ 0.46
SSBP4-211ENST00000601614 TSSK4Q6SA08 328 aa17.92■□□□□ 0.46
SSBP4-211ENST00000601614 PRSS55Q6UWB4 352 aaPredicted RBP17.92■□□□□ 0.46
SSBP4-211ENST00000601614 SRGAP1Q7Z6B7 1085 aa17.92■□□□□ 0.46
SSBP4-211ENST00000601614 GSTCDQ8NEC7 633 aa17.92■□□□□ 0.46
SSBP4-211ENST00000601614 TBCKQ8TEA7 893 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms