RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 LILRB3O75022 631 aa18.88■□□□□ 0.61
SCAF1-204ENST00000601038 WEE2P0C1S8 567 aa18.88■□□□□ 0.61
SCAF1-204ENST00000601038 GLRA2P23416 452 aa18.88■□□□□ 0.61
SCAF1-204ENST00000601038 ST3GAL1Q11201 340 aa18.88■□□□□ 0.61
SCAF1-204ENST00000601038 KIAA1841Q6NSI8 718 aa18.88■□□□□ 0.61
SCAF1-204ENST00000601038 ZBTB33Q86T24 672 aa18.88■□□□□ 0.61
SCAF1-204ENST00000601038 CABP7Q86V35 215 aa18.88■□□□□ 0.61
SCAF1-204ENST00000601038 SUGP1Q8IWZ8 645 aaKnown RBP18.88■□□□□ 0.61
SCAF1-204ENST00000601038 COLGALT2Q8IYK4 626 aa18.88■□□□□ 0.61
SCAF1-204ENST00000601038 PIGOQ8TEQ8 1089 aa18.88■□□□□ 0.61
SCAF1-204ENST00000601038 KLHL5Q96PQ7 755 aa18.88■□□□□ 0.61
SCAF1-204ENST00000601038 GAD1Q99259 594 aa18.88■□□□□ 0.61
SCAF1-204ENST00000601038 TMEM60Q9H2L4 133 aa18.88■□□□□ 0.61
SCAF1-204ENST00000601038 RNF39Q9H2S5 420 aa18.88■□□□□ 0.61
SCAF1-204ENST00000601038 MRPL17Q9NRX2 175 aaKnown RBP18.88■□□□□ 0.61
SCAF1-204ENST00000601038 ARL5CA6NH57 179 aa18.87■□□□□ 0.61
SCAF1-204ENST00000601038 POTEMA6NI47 508 aa18.87■□□□□ 0.61
SCAF1-204ENST00000601038 C2CD4DB7Z1M9 353 aa18.87■□□□□ 0.61
SCAF1-204ENST00000601038 CNPP09543 421 aaKnown RBP18.87■□□□□ 0.61
SCAF1-204ENST00000601038 SPATA31C1P0DKV0 1188 aa18.87■□□□□ 0.61
SCAF1-204ENST00000601038 ARF4P18085 180 aaPredicted RBP18.87■□□□□ 0.61
SCAF1-204ENST00000601038 KLRC2P26717 231 aa18.87■□□□□ 0.61
SCAF1-204ENST00000601038 DSC1Q08554 894 aa18.87■□□□□ 0.61
SCAF1-204ENST00000601038 SAFBQ15424 915 aaKnown RBP eCLIP18.87■□□□□ 0.61
SCAF1-204ENST00000601038 AMHR2Q16671 573 aa18.87■□□□□ 0.61
SCAF1-204ENST00000601038 KANK3Q6NY19 840 aa18.87■□□□□ 0.61
SCAF1-204ENST00000601038 ALYREFQ86V81 257 aaKnown RBP18.87■□□□□ 0.61
SCAF1-204ENST00000601038 PRRX2Q99811 253 aa18.87■□□□□ 0.61
SCAF1-204ENST00000601038 LIMCH1Q9UPQ0 1083 aa18.87■□□□□ 0.61
SCAF1-204ENST00000601038 GIT1Q9Y2X7 761 aa18.87■□□□□ 0.61
SCAF1-204ENST00000601038 HES2Q9Y543 173 aa18.87■□□□□ 0.61
SCAF1-204ENST00000601038 MYO10Q9HD67 2058 aa18.86■□□□□ 0.61
SCAF1-204ENST00000601038 A0A087WWV3 80 aa18.86■□□□□ 0.61
SCAF1-204ENST00000601038 SEC24BO95487 1268 aa18.86■□□□□ 0.61
SCAF1-204ENST00000601038 SOD2P04179 222 aa18.86■□□□□ 0.61
SCAF1-204ENST00000601038 SSBP05455 408 aaKnown RBP eCLIP18.86■□□□□ 0.61
SCAF1-204ENST00000601038 ATP2B1P20020 1258 aa18.86■□□□□ 0.61
SCAF1-204ENST00000601038 MCM7P33993 719 aa18.86■□□□□ 0.61
SCAF1-204ENST00000601038 MLH1P40692 756 aa18.86■□□□□ 0.61
SCAF1-204ENST00000601038 CLCN4P51793 760 aa18.86■□□□□ 0.61
SCAF1-204ENST00000601038 CATSPER3Q86XQ3 398 aa18.86■□□□□ 0.61
SCAF1-204ENST00000601038 HACE1Q8IYU2 909 aa18.86■□□□□ 0.61
SCAF1-204ENST00000601038 KREMEN2Q8NCW0 462 aa18.86■□□□□ 0.61
SCAF1-204ENST00000601038 TRIM6Q9C030 488 aaPredicted RBP18.86■□□□□ 0.61
SCAF1-204ENST00000601038 POLR3FQ9H1D9 316 aaPredicted RBP18.86■□□□□ 0.61
SCAF1-204ENST00000601038 SFXN1Q9H9B4 322 aa18.86■□□□□ 0.61
SCAF1-204ENST00000601038 TUFT1Q9NNX1 390 aa18.86■□□□□ 0.61
SCAF1-204ENST00000601038 MARCH5Q9NX47 278 aa18.86■□□□□ 0.61
SCAF1-204ENST00000601038 MIOSQ9NXC5 875 aa18.86■□□□□ 0.61
SCAF1-204ENST00000601038 DBR1Q9UK59 544 aaKnown RBP18.86■□□□□ 0.61
SCAF1-204ENST00000601038 USTQ9Y2C2 406 aa18.86■□□□□ 0.61
SCAF1-204ENST00000601038 SSX2IPQ9Y2D8 614 aa18.86■□□□□ 0.61
SCAF1-204ENST00000601038 A0A1B0GUA9 196 aa18.85■□□□□ 0.61
SCAF1-204ENST00000601038 USO1O60763 962 aaKnown RBP18.85■□□□□ 0.61
SCAF1-204ENST00000601038 EFEMP2O95967 443 aa18.85■□□□□ 0.61
SCAF1-204ENST00000601038 OR1G1P47890 313 aa18.85■□□□□ 0.61
SCAF1-204ENST00000601038 IER5LQ5T953 404 aa18.85■□□□□ 0.61
SCAF1-204ENST00000601038 TMC5Q6UXY8 1006 aa18.85■□□□□ 0.61
SCAF1-204ENST00000601038 GPR149Q86SP6 731 aa18.85■□□□□ 0.61
SCAF1-204ENST00000601038 UBALD2Q8IYN6 164 aa18.85■□□□□ 0.61
SCAF1-204ENST00000601038 RNF168Q8IYW5 571 aaPredicted RBP18.85■□□□□ 0.61
SCAF1-204ENST00000601038 ZDHHC14Q8IZN3 488 aa18.85■□□□□ 0.61
SCAF1-204ENST00000601038 PLCD3Q8N3E9 789 aa18.85■□□□□ 0.61
SCAF1-204ENST00000601038 ZFP42Q96MM3 310 aa18.85■□□□□ 0.61
SCAF1-204ENST00000601038 POLR3CQ9BUI4 534 aaPredicted RBP18.85■□□□□ 0.61
SCAF1-204ENST00000601038 SORCS3Q9UPU3 1222 aa18.85■□□□□ 0.61
SCAF1-204ENST00000601038 PRG3Q9Y2Y8 225 aaPredicted RBP18.85■□□□□ 0.61
SCAF1-204ENST00000601038 B4GALT5O43286 388 aa18.84■□□□□ 0.61
SCAF1-204ENST00000601038 NR1I2O75469 434 aa18.84■□□□□ 0.61
SCAF1-204ENST00000601038 URODP06132 367 aa18.84■□□□□ 0.61
SCAF1-204ENST00000601038 SCNN1GP51170 649 aa18.84■□□□□ 0.61
SCAF1-204ENST00000601038 GUCY1B3Q02153 619 aa18.84■□□□□ 0.61
SCAF1-204ENST00000601038 MTMR3Q13615 1198 aa18.84■□□□□ 0.61
SCAF1-204ENST00000601038 SLC27A1Q6PCB7 646 aa18.84■□□□□ 0.61
SCAF1-204ENST00000601038 TDRD5Q8NAT2 981 aaKnown RBP18.84■□□□□ 0.61
SCAF1-204ENST00000601038 GSTCDQ8NEC7 633 aa18.84■□□□□ 0.61
SCAF1-204ENST00000601038 MCPH1Q8NEM0 835 aa18.84■□□□□ 0.61
SCAF1-204ENST00000601038 C8orf76Q96K31 380 aa18.84■□□□□ 0.61
SCAF1-204ENST00000601038 NACC1Q96RE7 527 aa18.84■□□□□ 0.61
SCAF1-204ENST00000601038 RPS6KC1Q96S38 1066 aa18.84■□□□□ 0.61
SCAF1-204ENST00000601038 LLPHQ9BRT6 129 aaKnown RBP18.84■□□□□ 0.61
SCAF1-204ENST00000601038 HERC2P3Q9BVR0 1158 aa18.84■□□□□ 0.61
SCAF1-204ENST00000601038 APOL6Q9BWW8 343 aa18.84■□□□□ 0.61
SCAF1-204ENST00000601038 FOXP1Q9H334 677 aaPredicted RBP18.84■□□□□ 0.61
SCAF1-204ENST00000601038 NXF3Q9H4D5 531 aaKnown RBP18.84■□□□□ 0.61
SCAF1-204ENST00000601038 TRIOO75962 3097 aa18.84■□□□□ 0.61
SCAF1-204ENST00000601038 LRRIQ4A6NIV6 560 aa18.83■□□□□ 0.6
SCAF1-204ENST00000601038 MED24O75448 989 aa18.83■□□□□ 0.6
SCAF1-204ENST00000601038 MRE11P49959 708 aa18.83■□□□□ 0.6
SCAF1-204ENST00000601038 ORC2Q13416 577 aaPredicted RBP18.83■□□□□ 0.6
SCAF1-204ENST00000601038 KIAA0319Q5VV43 1072 aa18.83■□□□□ 0.6
SCAF1-204ENST00000601038 MAEAQ7L5Y9 396 aa18.83■□□□□ 0.6
SCAF1-204ENST00000601038 TAS1R1Q7RTX1 841 aa18.83■□□□□ 0.6
SCAF1-204ENST00000601038 CCDC83Q8IWF9 413 aa18.83■□□□□ 0.6
SCAF1-204ENST00000601038 PRSS33Q8NF86 280 aa18.83■□□□□ 0.6
SCAF1-204ENST00000601038 PRIMPOLQ96LW4 560 aa18.83■□□□□ 0.6
SCAF1-204ENST00000601038 COLEC11Q9BWP8 271 aa18.83■□□□□ 0.6
SCAF1-204ENST00000601038 GPRC5CQ9NQ84 441 aa18.83■□□□□ 0.6
SCAF1-204ENST00000601038 LIMD1Q9UGP4 676 aa18.83■□□□□ 0.6
SCAF1-204ENST00000601038 PIEZO1Q92508 2521 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms