RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 KIAA2013Q8IYS2 634 aa18.75■□□□□ 0.59
USE1-208ENST00000600970 CNNM3Q8NE01 707 aa18.75■□□□□ 0.59
USE1-208ENST00000600970 PSPC1Q8WXF1 523 aaKnown RBP18.75■□□□□ 0.59
USE1-208ENST00000600970 TMEM143Q96AN5 459 aa18.75■□□□□ 0.59
USE1-208ENST00000600970 DHX33Q9H6R0 707 aaKnown RBP18.75■□□□□ 0.59
USE1-208ENST00000600970 NCOA5Q9HCD5 579 aaKnown RBP18.75■□□□□ 0.59
USE1-208ENST00000600970 UBN1Q9NPG3 1134 aa18.75■□□□□ 0.59
USE1-208ENST00000600970 DLGAP2Q9P1A6 1054 aa18.75■□□□□ 0.59
USE1-208ENST00000600970 DNAH14Q0VDD8 3507 aa18.75■□□□□ 0.59
USE1-208ENST00000600970 ARID2Q68CP9 1835 aa18.74■□□□□ 0.59
USE1-208ENST00000600970 DMXL1Q9Y485 3027 aa18.74■□□□□ 0.59
USE1-208ENST00000600970 MED19A0JLT2 244 aaPredicted RBP18.74■□□□□ 0.59
USE1-208ENST00000600970 F8W810 466 aa18.74■□□□□ 0.59
USE1-208ENST00000600970 ITGA4P13612 1032 aa18.74■□□□□ 0.59
USE1-208ENST00000600970 QARSP47897 775 aaKnown RBP18.74■□□□□ 0.59
USE1-208ENST00000600970 CCT2P78371 535 aaKnown RBP18.74■□□□□ 0.59
USE1-208ENST00000600970 DSG1Q02413 1049 aa18.74■□□□□ 0.59
USE1-208ENST00000600970 DSC1Q08554 894 aa18.74■□□□□ 0.59
USE1-208ENST00000600970 LAMTOR4Q0VGL1 99 aa18.74■□□□□ 0.59
USE1-208ENST00000600970 PHLDB3Q6NSJ2 640 aa18.74■□□□□ 0.59
USE1-208ENST00000600970 MOXD1Q6UVY6 613 aa18.74■□□□□ 0.59
USE1-208ENST00000600970 HDAC7Q8WUI4 952 aa18.74■□□□□ 0.59
USE1-208ENST00000600970 CEP170P1Q96L14 293 aa18.74■□□□□ 0.59
USE1-208ENST00000600970 NT5C3AQ9H0P0 336 aa18.74■□□□□ 0.59
USE1-208ENST00000600970 MIOSQ9NXC5 875 aa18.74■□□□□ 0.59
USE1-208ENST00000600970 WRAP73Q9P2S5 460 aaPredicted RBP18.74■□□□□ 0.59
USE1-208ENST00000600970 DDX25Q9UHL0 483 aaKnown RBP18.74■□□□□ 0.59
USE1-208ENST00000600970 SIT1Q9Y3P8 196 aa18.74■□□□□ 0.59
USE1-208ENST00000600970 IPPQ9Y573 584 aa18.74■□□□□ 0.59
USE1-208ENST00000600970 SNX14Q9Y5W7 946 aa18.74■□□□□ 0.59
USE1-208ENST00000600970 ARL5CA6NH57 179 aa18.73■□□□□ 0.59
USE1-208ENST00000600970 SLC37A4O43826 429 aa18.73■□□□□ 0.59
USE1-208ENST00000600970 SP9P0CG40 484 aa18.73■□□□□ 0.59
USE1-208ENST00000600970 LAMP2P13473 410 aa18.73■□□□□ 0.59
USE1-208ENST00000600970 RPS6KB1P23443 525 aa18.73■□□□□ 0.59
USE1-208ENST00000600970 PDIA3P30101 505 aaKnown RBP18.73■□□□□ 0.59
USE1-208ENST00000600970 MLH1P40692 756 aa18.73■□□□□ 0.59
USE1-208ENST00000600970 POTEGQ6S5H5 508 aa18.73■□□□□ 0.59
USE1-208ENST00000600970 PALB2Q86YC2 1186 aa18.73■□□□□ 0.59
USE1-208ENST00000600970 EXOC8Q8IYI6 725 aa18.73■□□□□ 0.59
USE1-208ENST00000600970 BLIDQ8IZY5 108 aa18.73■□□□□ 0.59
USE1-208ENST00000600970 RNF149Q8NC42 400 aa18.73■□□□□ 0.59
USE1-208ENST00000600970 GAD1Q99259 594 aa18.73■□□□□ 0.59
USE1-208ENST00000600970 EIF2AQ9BY44 585 aaKnown RBP18.73■□□□□ 0.59
USE1-208ENST00000600970 RNF39Q9H2S5 420 aa18.73■□□□□ 0.59
USE1-208ENST00000600970 PLEKHA4Q9H4M7 779 aa18.73■□□□□ 0.59
USE1-208ENST00000600970 PIDD1Q9HB75 910 aa18.73■□□□□ 0.59
USE1-208ENST00000600970 ARHGEF3Q9NR81 526 aa18.73■□□□□ 0.59
USE1-208ENST00000600970 CHST7Q9NS84 486 aa18.73■□□□□ 0.59
USE1-208ENST00000600970 BMP2KQ9NSY1 1161 aaPredicted RBP18.73■□□□□ 0.59
USE1-208ENST00000600970 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.73■□□□□ 0.59
USE1-208ENST00000600970 ANHXE9PGG2 379 aa18.72■□□□□ 0.59
USE1-208ENST00000600970 TGM5O43548 720 aa18.72■□□□□ 0.59
USE1-208ENST00000600970 GAS2O43903 313 aaKnown RBP18.72■□□□□ 0.59
USE1-208ENST00000600970 DKC1O60832 514 aaKnown RBP eCLIP18.72■□□□□ 0.59
USE1-208ENST00000600970 C1RP00736 705 aa18.72■□□□□ 0.59
USE1-208ENST00000600970 P4HBP07237 508 aaKnown RBP18.72■□□□□ 0.59
USE1-208ENST00000600970 RFC5P40937 340 aa18.72■□□□□ 0.59
USE1-208ENST00000600970 SCNN1GP51170 649 aa18.72■□□□□ 0.59
USE1-208ENST00000600970 PPP2R5CQ13362 524 aa18.72■□□□□ 0.59
USE1-208ENST00000600970 NPY5RQ15761 445 aa18.72■□□□□ 0.59
USE1-208ENST00000600970 GET4Q7L5D6 327 aaPredicted RBP18.72■□□□□ 0.59
USE1-208ENST00000600970 DGLUCYQ7Z3D6 616 aa18.72■□□□□ 0.59
USE1-208ENST00000600970 C1orf210Q8IVY1 113 aa18.72■□□□□ 0.59
USE1-208ENST00000600970 ZDHHC7Q9NXF8 308 aa18.72■□□□□ 0.59
USE1-208ENST00000600970 VAV3Q9UKW4 847 aa18.72■□□□□ 0.59
USE1-208ENST00000600970 HES2Q9Y543 173 aa18.72■□□□□ 0.59
USE1-208ENST00000600970 PPME1Q9Y570 386 aa18.72■□□□□ 0.59
USE1-208ENST00000600970 MYH15Q9Y2K3 1946 aa18.71■□□□□ 0.59
USE1-208ENST00000600970 ASAP2O43150 1006 aa18.71■□□□□ 0.59
USE1-208ENST00000600970 CDC45O75419 566 aa18.71■□□□□ 0.59
USE1-208ENST00000600970 ERLIN2O94905 339 aa18.71■□□□□ 0.59
USE1-208ENST00000600970 EVCP57679 992 aa18.71■□□□□ 0.59
USE1-208ENST00000600970 SSRP1Q08945 709 aaKnown RBP18.71■□□□□ 0.59
USE1-208ENST00000600970 HTR4Q13639 388 aa18.71■□□□□ 0.59
USE1-208ENST00000600970 LILRA6Q6PI73 481 aa18.71■□□□□ 0.59
USE1-208ENST00000600970 DCLRE1AQ6PJP8 1040 aa18.71■□□□□ 0.59
USE1-208ENST00000600970 ZC3H14Q6PJT7 736 aaKnown RBP18.71■□□□□ 0.59
USE1-208ENST00000600970 FERMT3Q86UX7 667 aa18.71■□□□□ 0.59
USE1-208ENST00000600970 GLYCTKQ8IVS8 523 aa18.71■□□□□ 0.59
USE1-208ENST00000600970 DAGLBQ8NCG7 672 aa18.71■□□□□ 0.59
USE1-208ENST00000600970 ST13P5Q8NFI4 369 aaPredicted RBP18.71■□□□□ 0.59
USE1-208ENST00000600970 TCP11Q8WWU5 503 aa18.71■□□□□ 0.59
USE1-208ENST00000600970 CPB2Q96IY4 423 aa18.71■□□□□ 0.59
USE1-208ENST00000600970 B3GALT6Q96L58 329 aa18.71■□□□□ 0.59
USE1-208ENST00000600970 ZFP42Q96MM3 310 aa18.71■□□□□ 0.59
USE1-208ENST00000600970 COLEC11Q9BWP8 271 aa18.71■□□□□ 0.59
USE1-208ENST00000600970 GPR62Q9BZJ7 368 aa18.71■□□□□ 0.59
USE1-208ENST00000600970 PRKD2Q9BZL6 878 aa18.71■□□□□ 0.59
USE1-208ENST00000600970 SLC2A4RGQ9NR83 387 aa18.71■□□□□ 0.59
USE1-208ENST00000600970 NUMBLQ9Y6R0 609 aa18.71■□□□□ 0.59
USE1-208ENST00000600970 MIA3Q5JRA6 1907 aa18.7■□□□□ 0.58
USE1-208ENST00000600970 GVINP1Q7Z2Y8 2422 aa18.7■□□□□ 0.58
USE1-208ENST00000600970 TSPAN1O60635 241 aa18.7■□□□□ 0.58
USE1-208ENST00000600970 NR1I2O75469 434 aa18.7■□□□□ 0.58
USE1-208ENST00000600970 GLULP15104 373 aa18.7■□□□□ 0.58
USE1-208ENST00000600970 AXLP30530 894 aa18.7■□□□□ 0.58
USE1-208ENST00000600970 HSPA4P34932 840 aa18.7■□□□□ 0.58
USE1-208ENST00000600970 EMC2Q15006 297 aa18.7■□□□□ 0.58
USE1-208ENST00000600970 INF2Q27J81 1249 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms