RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 AGPSO00116 658 aa12.44□□□□□ -0.42
ARHGEF1-220ENST00000600274 MYCNP04198 464 aaPredicted RBP12.44□□□□□ -0.42
ARHGEF1-220ENST00000600274 ERVK-9P63128 1117 aa12.44□□□□□ -0.42
ARHGEF1-220ENST00000600274 DAB2IPQ5VWQ8 1189 aa12.44□□□□□ -0.42
ARHGEF1-220ENST00000600274 SPOPLQ6IQ16 392 aa12.44□□□□□ -0.42
ARHGEF1-220ENST00000600274 LLGL2Q6P1M3 1020 aa12.44□□□□□ -0.42
ARHGEF1-220ENST00000600274 FOXR2Q6PJQ5 311 aa12.44□□□□□ -0.42
ARHGEF1-220ENST00000600274 NSUN6Q8TEA1 469 aaKnown RBP12.44□□□□□ -0.42
ARHGEF1-220ENST00000600274 SEMA4DQ92854 862 aa12.44□□□□□ -0.42
ARHGEF1-220ENST00000600274 ZNF653Q96CK0 615 aa12.44□□□□□ -0.42
ARHGEF1-220ENST00000600274 FNBP1Q96RU3 617 aa12.44□□□□□ -0.42
ARHGEF1-220ENST00000600274 JPH1Q9HDC5 661 aaPredicted RBP12.44□□□□□ -0.42
ARHGEF1-220ENST00000600274 TLDC2A0PJX2 215 aa12.44□□□□□ -0.42
ARHGEF1-220ENST00000600274 KRT76Q01546 638 aa12.44□□□□□ -0.42
ARHGEF1-220ENST00000600274 PDCLQ13371 301 aa12.44□□□□□ -0.42
ARHGEF1-220ENST00000600274 OTUD6AQ7L8S5 288 aa12.44□□□□□ -0.42
ARHGEF1-220ENST00000600274 CCDC25Q86WR0 208 aa12.44□□□□□ -0.42
ARHGEF1-220ENST00000600274 CDR2LQ86X02 465 aaPredicted RBP12.44□□□□□ -0.42
ARHGEF1-220ENST00000600274 SCYL3Q8IZE3 742 aa12.44□□□□□ -0.42
ARHGEF1-220ENST00000600274 RFFLQ8WZ73 363 aa12.44□□□□□ -0.42
ARHGEF1-220ENST00000600274 IFT74Q96LB3 600 aa12.44□□□□□ -0.42
ARHGEF1-220ENST00000600274 MKNK1Q9BUB5 465 aa12.44□□□□□ -0.42
ARHGEF1-220ENST00000600274 MOV10L1Q9BXT6 1211 aaKnown RBP12.44□□□□□ -0.42
ARHGEF1-220ENST00000600274 POLR3FQ9H1D9 316 aaPredicted RBP12.44□□□□□ -0.42
ARHGEF1-220ENST00000600274 A1CFQ9NQ94 594 aaKnown RBP12.44□□□□□ -0.42
ARHGEF1-220ENST00000600274 OSTNP61366 133 aa12.44□□□□□ -0.42
ARHGEF1-220ENST00000600274 PPP2R5AQ15172 486 aa12.44□□□□□ -0.42
ARHGEF1-220ENST00000600274 ZBTB33Q86T24 672 aa12.44□□□□□ -0.42
ARHGEF1-220ENST00000600274 SYCE1Q8N0S2 351 aa12.44□□□□□ -0.42
ARHGEF1-220ENST00000600274 NEK9Q8TD19 979 aa12.44□□□□□ -0.42
ARHGEF1-220ENST00000600274 KRT35Q92764 455 aa12.44□□□□□ -0.42
ARHGEF1-220ENST00000600274 ZBTB45Q96K62 511 aaPredicted RBP12.44□□□□□ -0.42
ARHGEF1-220ENST00000600274 AS3MTQ9HBK9 375 aa12.44□□□□□ -0.42
ARHGEF1-220ENST00000600274 MYH11P35749 1972 aa12.43□□□□□ -0.42
ARHGEF1-220ENST00000600274 ADSSP30520 456 aa12.43□□□□□ -0.42
ARHGEF1-220ENST00000600274 PRKCIP41743 596 aa12.43□□□□□ -0.42
ARHGEF1-220ENST00000600274 VPS41P49754 854 aa12.43□□□□□ -0.42
ARHGEF1-220ENST00000600274 JAK3P52333 1124 aa12.43□□□□□ -0.42
ARHGEF1-220ENST00000600274 ACTR2P61160 394 aa12.43□□□□□ -0.42
ARHGEF1-220ENST00000600274 GNGT1P63211 74 aa12.43□□□□□ -0.42
ARHGEF1-220ENST00000600274 C10orf76Q5T2E6 689 aa12.43□□□□□ -0.42
ARHGEF1-220ENST00000600274 NLGN2Q8NFZ4 835 aa12.43□□□□□ -0.42
ARHGEF1-220ENST00000600274 ATP6V0A1Q93050 837 aa12.43□□□□□ -0.42
ARHGEF1-220ENST00000600274 RNPC3Q96LT9 517 aaKnown RBP12.43□□□□□ -0.42
ARHGEF1-220ENST00000600274 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.43□□□□□ -0.422e-7■■■□□ 17.1
ARHGEF1-220ENST00000600274 COG5Q9UP83 839 aa12.43□□□□□ -0.42
ARHGEF1-220ENST00000600274 C10orf71Q711Q0 1435 aa12.43□□□□□ -0.42
ARHGEF1-220ENST00000600274 GOLGA6L10A6NI86 522 aa12.43□□□□□ -0.42
ARHGEF1-220ENST00000600274 SNX1Q13596 522 aa12.43□□□□□ -0.42
ARHGEF1-220ENST00000600274 ZNF394Q53GI3 561 aa12.43□□□□□ -0.42
ARHGEF1-220ENST00000600274 NOP9Q86U38 636 aaKnown RBP12.43□□□□□ -0.42
ARHGEF1-220ENST00000600274 NT5DC3Q86UY8 548 aa12.43□□□□□ -0.42
ARHGEF1-220ENST00000600274 FAM118BQ9BPY3 351 aa12.43□□□□□ -0.42
ARHGEF1-220ENST00000600274 DMAC2Q9NW81 257 aa12.43□□□□□ -0.42
ARHGEF1-220ENST00000600274 KCND2Q9NZV8 630 aa12.43□□□□□ -0.42
ARHGEF1-220ENST00000600274 SLC9A2Q9UBY0 812 aa12.43□□□□□ -0.42
ARHGEF1-220ENST00000600274 EXOC7Q9UPT5 735 aa12.43□□□□□ -0.42
ARHGEF1-220ENST00000600274 USTQ9Y2C2 406 aa12.43□□□□□ -0.42
ARHGEF1-220ENST00000600274 ALG6Q9Y672 507 aa12.43□□□□□ -0.42
ARHGEF1-220ENST00000600274 QSER1Q2KHR3 1735 aa12.43□□□□□ -0.42
ARHGEF1-220ENST00000600274 IFFO1Q0D2I5 559 aa12.43□□□□□ -0.42
ARHGEF1-220ENST00000600274 NNTQ13423 1086 aa12.43□□□□□ -0.42
ARHGEF1-220ENST00000600274 MOB2Q70IA6 237 aa12.43□□□□□ -0.42
ARHGEF1-220ENST00000600274 LRRC57Q8N9N7 239 aa12.43□□□□□ -0.42
ARHGEF1-220ENST00000600274 NT5C1BQ96P26 610 aa12.43□□□□□ -0.42
ARHGEF1-220ENST00000600274 GPR88Q9GZN0 384 aa12.43□□□□□ -0.42
ARHGEF1-220ENST00000600274 SYNPO2Q9UMS6 1093 aa12.43□□□□□ -0.42
ARHGEF1-220ENST00000600274 ATP8A1Q9Y2Q0 1164 aa12.43□□□□□ -0.42
ARHGEF1-220ENST00000600274 SNX24Q9Y343 169 aa12.43□□□□□ -0.42
ARHGEF1-220ENST00000600274 ADGRA3Q8IWK6 1321 aa12.42□□□□□ -0.42
ARHGEF1-220ENST00000600274 OPA1O60313 960 aa12.42□□□□□ -0.42
ARHGEF1-220ENST00000600274 CTNNA1P35221 906 aaKnown RBP12.42□□□□□ -0.42
ARHGEF1-220ENST00000600274 EMBQ6PCB8 327 aa12.42□□□□□ -0.42
ARHGEF1-220ENST00000600274 VSIG10LQ86VR7 867 aa12.42□□□□□ -0.42
ARHGEF1-220ENST00000600274 TMEM161BQ8NDZ6 487 aa12.42□□□□□ -0.42
ARHGEF1-220ENST00000600274 BCAS4Q8TDM0 211 aa12.42□□□□□ -0.42
ARHGEF1-220ENST00000600274 PBKQ96KB5 322 aa12.42□□□□□ -0.42
ARHGEF1-220ENST00000600274 TEX13BQ9BXU2 312 aa12.42□□□□□ -0.42
ARHGEF1-220ENST00000600274 DNAJC17Q9NVM6 304 aaKnown RBP12.42□□□□□ -0.42
ARHGEF1-220ENST00000600274 PGAP2Q9UHJ9 254 aa12.42□□□□□ -0.42
ARHGEF1-220ENST00000600274 PLAAQ9Y263 795 aa12.42□□□□□ -0.42
ARHGEF1-220ENST00000600274 GREB1LQ9C091 1923 aaPredicted RBP12.42□□□□□ -0.42
ARHGEF1-220ENST00000600274 GTPBP10A4D1E9 387 aaKnown RBP12.42□□□□□ -0.42
ARHGEF1-220ENST00000600274 PSAPP07602 524 aa12.42□□□□□ -0.42
ARHGEF1-220ENST00000600274 SRGAP2CP0DJJ0 459 aa12.42□□□□□ -0.42
ARHGEF1-220ENST00000600274 FLT3P36888 993 aa12.42□□□□□ -0.42
ARHGEF1-220ENST00000600274 KCNJ1P48048 391 aa12.42□□□□□ -0.42
ARHGEF1-220ENST00000600274 PDE6CP51160 858 aa12.42□□□□□ -0.42
ARHGEF1-220ENST00000600274 PLTPP55058 493 aa12.42□□□□□ -0.42
ARHGEF1-220ENST00000600274 DEPTORQ8TB45 409 aa12.42□□□□□ -0.42
ARHGEF1-220ENST00000600274 CPA5Q8WXQ8 436 aa12.42□□□□□ -0.42
ARHGEF1-220ENST00000600274 ALG3Q92685 438 aa12.42□□□□□ -0.42
ARHGEF1-220ENST00000600274 ZBTB10Q96DT7 871 aa12.42□□□□□ -0.42
ARHGEF1-220ENST00000600274 OTUD5Q96G74 571 aa12.42□□□□□ -0.42
ARHGEF1-220ENST00000600274 PCDHB18PQ96TA0 734 aa12.42□□□□□ -0.42
ARHGEF1-220ENST00000600274 ACAD9Q9H845 621 aa12.42□□□□□ -0.42
ARHGEF1-220ENST00000600274 EBAG9O00559 213 aa12.42□□□□□ -0.42
ARHGEF1-220ENST00000600274 STRN3Q13033 797 aa12.42□□□□□ -0.42
ARHGEF1-220ENST00000600274 TRIP13Q15645 432 aaPredicted RBP12.42□□□□□ -0.42
ARHGEF1-220ENST00000600274 GNPTABQ3T906 1256 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms