RNA–Protein interactions for RNA: ENST00000600031.1

VRK3-218, Transcript of vaccinia related kinase 3, humanhuman

Gene VRK3, Length 2,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-218ENST00000600031 PSEN2P49810 448 aa16.54■□□□□ 0.24
VRK3-218ENST00000600031 FXR1P51114 621 aaKnown RBP eCLIP16.54■□□□□ 0.24
VRK3-218ENST00000600031 DCAF17Q5H9S7 520 aaPredicted RBP16.54■□□□□ 0.24
VRK3-218ENST00000600031 TMCO3Q6UWJ1 677 aa16.54■□□□□ 0.24
VRK3-218ENST00000600031 ZNF771Q7L3S4 317 aaPredicted RBP16.54■□□□□ 0.24
VRK3-218ENST00000600031 XXYLT1Q8NBI6 393 aa16.54■□□□□ 0.24
VRK3-218ENST00000600031 LMBR1Q8WVP7 490 aa16.54■□□□□ 0.24
VRK3-218ENST00000600031 NLRP4Q96MN2 994 aa16.54■□□□□ 0.24
VRK3-218ENST00000600031 SIK3Q9Y2K2 1263 aa16.54■□□□□ 0.24
VRK3-218ENST00000600031 GOLGA8IPA6NC78 632 aa16.53■□□□□ 0.24
VRK3-218ENST00000600031 GOLGA8JA6NMD2 632 aa16.53■□□□□ 0.24
VRK3-218ENST00000600031 FANCGO15287 622 aa16.53■□□□□ 0.24
VRK3-218ENST00000600031 FKTNO75072 461 aa16.53■□□□□ 0.24
VRK3-218ENST00000600031 CASP14P31944 242 aa16.53■□□□□ 0.24
VRK3-218ENST00000600031 PURAQ00577 322 aaKnown RBP16.53■□□□□ 0.24
VRK3-218ENST00000600031 TERF2Q15554 542 aa16.53■□□□□ 0.24
VRK3-218ENST00000600031 SLC35C1Q96A29 364 aa16.53■□□□□ 0.24
VRK3-218ENST00000600031 CCDC113Q9H0I3 377 aa16.53■□□□□ 0.24
VRK3-218ENST00000600031 SAGE1Q9NXZ1 904 aa16.53■□□□□ 0.24
VRK3-218ENST00000600031 RRN3P2A6NIE6 340 aa16.52■□□□□ 0.24
VRK3-218ENST00000600031 ASAP2O43150 1006 aa16.52■□□□□ 0.24
VRK3-218ENST00000600031 PIGRP01833 764 aa16.52■□□□□ 0.24
VRK3-218ENST00000600031 CCDC175P0C221 793 aa16.52■□□□□ 0.24
VRK3-218ENST00000600031 LIG4P49917 911 aa16.52■□□□□ 0.24
VRK3-218ENST00000600031 KCNMA1Q12791 1236 aa16.52■□□□□ 0.24
VRK3-218ENST00000600031 HIC1Q14526 733 aa16.52■□□□□ 0.24
VRK3-218ENST00000600031 GNASQ5JWF2 1037 aa16.52■□□□□ 0.24
VRK3-218ENST00000600031 TCERG1LQ5VWI1 586 aa16.52■□□□□ 0.24
VRK3-218ENST00000600031 TOGARAM2Q6ZUX3 1019 aa16.52■□□□□ 0.24
VRK3-218ENST00000600031 RAET1EQ8TD07 263 aa16.52■□□□□ 0.24
VRK3-218ENST00000600031 POMGNT1Q8WZA1 660 aa16.52■□□□□ 0.24
VRK3-218ENST00000600031 SAAL1Q96ER3 474 aa16.52■□□□□ 0.24
VRK3-218ENST00000600031 PCMTD1Q96MG8 357 aaPredicted RBP16.52■□□□□ 0.24
VRK3-218ENST00000600031 TARS2Q9BW92 718 aaKnown RBP16.52■□□□□ 0.24
VRK3-218ENST00000600031 UPF3AQ9H1J1 476 aaKnown RBP16.52■□□□□ 0.24
VRK3-218ENST00000600031 NRCAMQ92823 1304 aa16.52■□□□□ 0.23
VRK3-218ENST00000600031 TTLL13PA6NNM8 815 aa16.52■□□□□ 0.23
VRK3-218ENST00000600031 GNRH1P01148 92 aa16.52■□□□□ 0.23
VRK3-218ENST00000600031 AFPP02771 609 aaKnown RBP16.52■□□□□ 0.23
VRK3-218ENST00000600031 VTNP04004 478 aa16.52■□□□□ 0.23
VRK3-218ENST00000600031 RARBP10826 455 aa16.52■□□□□ 0.23
VRK3-218ENST00000600031 TMOD1P28289 359 aa16.52■□□□□ 0.23
VRK3-218ENST00000600031 EFNA5P52803 228 aa16.52■□□□□ 0.23
VRK3-218ENST00000600031 TFDP1Q14186 410 aa16.52■□□□□ 0.23
VRK3-218ENST00000600031 NFRKBQ6P4R8 1299 aa16.52■□□□□ 0.23
VRK3-218ENST00000600031 ZBTB8OSQ8IWT0 167 aa16.52■□□□□ 0.23
VRK3-218ENST00000600031 TSKSQ9UJT2 592 aa16.52■□□□□ 0.23
VRK3-218ENST00000600031 AKT3Q9Y243 479 aa16.52■□□□□ 0.23
VRK3-218ENST00000600031 MRFAP1Q9Y605 127 aa16.52■□□□□ 0.23
VRK3-218ENST00000600031 FHOD1Q9Y613 1164 aa16.52■□□□□ 0.23
VRK3-218ENST00000600031 TTC26A0AVF1 554 aa16.51■□□□□ 0.23
VRK3-218ENST00000600031 MSCO60682 206 aa16.51■□□□□ 0.23
VRK3-218ENST00000600031 MFAP3LO75121 409 aa16.51■□□□□ 0.23
VRK3-218ENST00000600031 ZRANB2O95218 330 aaKnown RBP eCLIP16.51■□□□□ 0.23
VRK3-218ENST00000600031 HMGCRP04035 888 aa16.51■□□□□ 0.23
VRK3-218ENST00000600031 GARTP22102 1010 aa16.51■□□□□ 0.23
VRK3-218ENST00000600031 PPP2R3AQ06190 1150 aa16.51■□□□□ 0.23
VRK3-218ENST00000600031 TRIM14Q14142 442 aa16.51■□□□□ 0.23
VRK3-218ENST00000600031 MAP3K21Q5TCX8 1036 aa16.51■□□□□ 0.23
VRK3-218ENST00000600031 CBWD2Q8IUF1 395 aa16.51■□□□□ 0.23
VRK3-218ENST00000600031 KIAA0319LQ8IZA0 1049 aa16.51■□□□□ 0.23
VRK3-218ENST00000600031 GPR161Q8N6U8 529 aaKnown RBP16.51■□□□□ 0.23
VRK3-218ENST00000600031 CCDC51Q96ER9 411 aa16.51■□□□□ 0.23
VRK3-218ENST00000600031 ZBTB45Q96K62 511 aaPredicted RBP16.51■□□□□ 0.23
VRK3-218ENST00000600031 PPP1R16BQ96T49 567 aa16.51■□□□□ 0.23
VRK3-218ENST00000600031 CRACR2AQ9BSW2 395 aa16.51■□□□□ 0.23
VRK3-218ENST00000600031 TTYH3Q9C0H2 523 aa16.51■□□□□ 0.23
VRK3-218ENST00000600031 HAPLN2Q9GZV7 340 aa16.51■□□□□ 0.23
VRK3-218ENST00000600031 C2orf40Q9H1Z8 148 aa16.51■□□□□ 0.23
VRK3-218ENST00000600031 STYXL1Q9Y6J8 313 aa16.51■□□□□ 0.23
VRK3-218ENST00000600031 ADRB2P07550 413 aa16.51■□□□□ 0.23
VRK3-218ENST00000600031 TRIM49P0CI25 452 aa16.51■□□□□ 0.23
VRK3-218ENST00000600031 TRIM49CP0CI26 452 aa16.51■□□□□ 0.23
VRK3-218ENST00000600031 PTENP60484 403 aa16.51■□□□□ 0.23
VRK3-218ENST00000600031 BFSP1Q12934 665 aa16.51■□□□□ 0.23
VRK3-218ENST00000600031 WDR24Q96S15 920 aa16.51■□□□□ 0.23
VRK3-218ENST00000600031 MMRN2Q9H8L6 949 aa16.51■□□□□ 0.23
VRK3-218ENST00000600031 MINDY3Q9H8M7 445 aa16.51■□□□□ 0.23
VRK3-218ENST00000600031 IFT122Q9HBG6 1241 aa16.51■□□□□ 0.23
VRK3-218ENST00000600031 A0A087WZ62 844 aa16.5■□□□□ 0.23
VRK3-218ENST00000600031 EPHB6O15197 1021 aa16.5■□□□□ 0.23
VRK3-218ENST00000600031 ADAMTS4O75173 837 aa16.5■□□□□ 0.23
VRK3-218ENST00000600031 PRKCBP05771 671 aa16.5■□□□□ 0.23
VRK3-218ENST00000600031 PNMA6AP0CW24 399 aaPredicted RBP16.5■□□□□ 0.23
VRK3-218ENST00000600031 TRIM21P19474 475 aaKnown RBP16.5■□□□□ 0.23
VRK3-218ENST00000600031 DLG4P78352 724 aa16.5■□□□□ 0.23
VRK3-218ENST00000600031 NKX3-2P78367 333 aa16.5■□□□□ 0.23
VRK3-218ENST00000600031 ADAM17P78536 824 aa16.5■□□□□ 0.23
VRK3-218ENST00000600031 MAPK6Q16659 721 aa16.5■□□□□ 0.23
VRK3-218ENST00000600031 PLEKHO2Q8TD55 490 aa16.5■□□□□ 0.23
VRK3-218ENST00000600031 PXYLP1Q8TE99 480 aa16.5■□□□□ 0.23
VRK3-218ENST00000600031 FBXL18Q96ME1 805 aa16.5■□□□□ 0.23
VRK3-218ENST00000600031 FDXACB1Q9BRP7 624 aaPredicted RBP16.5■□□□□ 0.23
VRK3-218ENST00000600031 NUP58Q9BVL2 599 aa16.5■□□□□ 0.23
VRK3-218ENST00000600031 KATNAL1Q9BW62 490 aa16.5■□□□□ 0.23
VRK3-218ENST00000600031 SPC25Q9HBM1 224 aa16.5■□□□□ 0.23
VRK3-218ENST00000600031 XPNPEP3Q9NQH7 507 aa16.5■□□□□ 0.23
VRK3-218ENST00000600031 FAM207AQ9NSI2 230 aaPredicted RBP16.5■□□□□ 0.23
VRK3-218ENST00000600031 MBLAC1A4D2B0 266 aaPredicted RBP16.49■□□□□ 0.23
VRK3-218ENST00000600031 MAPK13O15264 365 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms