RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 AFF1P51825 1210 aaKnown RBP23.6■■□□□ 1.37
PNKP-212ENST00000599454 NCBP1Q09161 790 aaKnown RBP23.6■■□□□ 1.37
PNKP-212ENST00000599454 MXD4Q14582 209 aaPredicted RBP23.6■■□□□ 1.37
PNKP-212ENST00000599454 XKR9Q5GH70 373 aa23.6■■□□□ 1.37
PNKP-212ENST00000599454 CYP26C1Q6V0L0 522 aa23.6■■□□□ 1.37
PNKP-212ENST00000599454 RHOBTB2Q9BYZ6 727 aa23.6■■□□□ 1.37
PNKP-212ENST00000599454 ADH1AP07327 375 aa23.59■■□□□ 1.37
PNKP-212ENST00000599454 POU5F1BQ06416 359 aa23.59■■□□□ 1.37
PNKP-212ENST00000599454 SCRN1Q12765 414 aa23.59■■□□□ 1.37
PNKP-212ENST00000599454 TDGQ13569 410 aa23.59■■□□□ 1.37
PNKP-212ENST00000599454 NCAPH2Q6IBW4 605 aa23.59■■□□□ 1.37
PNKP-212ENST00000599454 NOTUMQ6P988 496 aa23.59■■□□□ 1.37
PNKP-212ENST00000599454 PIK3AP1Q6ZUJ8 805 aa23.59■■□□□ 1.37
PNKP-212ENST00000599454 COLGALT2Q8IYK4 626 aa23.59■■□□□ 1.37
PNKP-212ENST00000599454 SMG8Q8ND04 991 aaKnown RBP23.59■■□□□ 1.37
PNKP-212ENST00000599454 RPS6KC1Q96S38 1066 aa23.59■■□□□ 1.37
PNKP-212ENST00000599454 USP34Q70CQ2 3546 aa23.59■■□□□ 1.37
PNKP-212ENST00000599454 NBL1P41271 181 aa23.58■■□□□ 1.37
PNKP-212ENST00000599454 PTENP60484 403 aa23.58■■□□□ 1.37
PNKP-212ENST00000599454 TFDP1Q14186 410 aa23.58■■□□□ 1.37
PNKP-212ENST00000599454 POTEDQ86YR6 584 aa23.58■■□□□ 1.37
PNKP-212ENST00000599454 IFNLR1Q8IU57 520 aaPredicted RBP23.58■■□□□ 1.37
PNKP-212ENST00000599454 DYDC2Q96IM9 177 aa23.58■■□□□ 1.37
PNKP-212ENST00000599454 BMP2KQ9NSY1 1161 aaPredicted RBP23.58■■□□□ 1.37
PNKP-212ENST00000599454 MARCH5Q9NX47 278 aa23.58■■□□□ 1.37
PNKP-212ENST00000599454 RGL1Q9NZL6 768 aa23.58■■□□□ 1.37
PNKP-212ENST00000599454 IGSF9Q9P2J2 1179 aa23.58■■□□□ 1.37
PNKP-212ENST00000599454 DUSP12Q9UNI6 340 aa23.58■■□□□ 1.37
PNKP-212ENST00000599454 IPPQ9Y573 584 aa23.58■■□□□ 1.37
PNKP-212ENST00000599454 SPTBN4Q9H254 2564 aa23.57■■□□□ 1.36
PNKP-212ENST00000599454 TSPAN1O60635 241 aa23.57■■□□□ 1.36
PNKP-212ENST00000599454 NR1I2O75469 434 aa23.57■■□□□ 1.36
PNKP-212ENST00000599454 C1RP00736 705 aa23.57■■□□□ 1.36
PNKP-212ENST00000599454 GLUD2P49448 558 aa23.57■■□□□ 1.36
PNKP-212ENST00000599454 AK2P54819 239 aa23.57■■□□□ 1.36
PNKP-212ENST00000599454 DSC1Q08554 894 aa23.57■■□□□ 1.36
PNKP-212ENST00000599454 SPIRE1Q08AE8 756 aa23.57■■□□□ 1.36
PNKP-212ENST00000599454 HACE1Q8IYU2 909 aa23.57■■□□□ 1.36
PNKP-212ENST00000599454 RNF168Q8IYW5 571 aaPredicted RBP23.57■■□□□ 1.36
PNKP-212ENST00000599454 WASF1Q92558 559 aa23.57■■□□□ 1.36
PNKP-212ENST00000599454 MAN1C1Q9NR34 630 aa23.57■■□□□ 1.36
PNKP-212ENST00000599454 PRG3Q9Y2Y8 225 aaPredicted RBP23.57■■□□□ 1.36
PNKP-212ENST00000599454 C2CD2LO14523 706 aa23.56■■□□□ 1.36
PNKP-212ENST00000599454 PFKFB2O60825 505 aa23.56■■□□□ 1.36
PNKP-212ENST00000599454 EFEMP2O95967 443 aa23.56■■□□□ 1.36
PNKP-212ENST00000599454 OR1G1P47890 313 aa23.56■■□□□ 1.36
PNKP-212ENST00000599454 CTTNQ14247 550 aaKnown RBP23.56■■□□□ 1.36
PNKP-212ENST00000599454 FEZF2Q8TBJ5 459 aa23.56■■□□□ 1.36
PNKP-212ENST00000599454 HDAC7Q8WUI4 952 aa23.56■■□□□ 1.36
PNKP-212ENST00000599454 STAMQ92783 540 aa23.56■■□□□ 1.36
PNKP-212ENST00000599454 GAD1Q99259 594 aa23.56■■□□□ 1.36
PNKP-212ENST00000599454 CSRNP2Q9H175 543 aa23.56■■□□□ 1.36
PNKP-212ENST00000599454 KCNK12Q9HB15 430 aa23.56■■□□□ 1.36
PNKP-212ENST00000599454 RXFP1Q9HBX9 757 aa23.56■■□□□ 1.36
PNKP-212ENST00000599454 GIT1Q9Y2X7 761 aa23.56■■□□□ 1.36
PNKP-212ENST00000599454 ZMYM2Q9UBW7 1377 aa23.55■■□□□ 1.36
PNKP-212ENST00000599454 ARL5CA6NH57 179 aa23.55■■□□□ 1.36
PNKP-212ENST00000599454 LYPLA2O95372 231 aa23.55■■□□□ 1.36
PNKP-212ENST00000599454 GLUD1P00367 558 aa23.55■■□□□ 1.36
PNKP-212ENST00000599454 MLH1P40692 756 aa23.55■■□□□ 1.36
PNKP-212ENST00000599454 CYP4A11Q02928 519 aa23.55■■□□□ 1.36
PNKP-212ENST00000599454 KIAA0319Q5VV43 1072 aa23.55■■□□□ 1.36
PNKP-212ENST00000599454 TPH2Q8IWU9 490 aa23.55■■□□□ 1.36
PNKP-212ENST00000599454 GPR65Q8IYL9 337 aa23.55■■□□□ 1.36
PNKP-212ENST00000599454 OXER1Q8TDS5 423 aa23.55■■□□□ 1.36
PNKP-212ENST00000599454 EIF2AQ9BY44 585 aaKnown RBP23.55■■□□□ 1.36
PNKP-212ENST00000599454 XPNPEP1Q9NQW7 623 aa23.55■■□□□ 1.36
PNKP-212ENST00000599454 ANKEF1Q9NU02 776 aa23.55■■□□□ 1.36
PNKP-212ENST00000599454 INO80B-WBP1J3KQ70 363 aa23.54■■□□□ 1.36
PNKP-212ENST00000599454 TEX28O15482 410 aa23.54■■□□□ 1.36
PNKP-212ENST00000599454 DGAT1O75907 488 aa23.54■■□□□ 1.36
PNKP-212ENST00000599454 SLITRK3O94933 977 aa23.54■■□□□ 1.36
PNKP-212ENST00000599454 AOC1P19801 751 aa23.54■■□□□ 1.36
PNKP-212ENST00000599454 DSG1Q02413 1049 aa23.54■■□□□ 1.36
PNKP-212ENST00000599454 CWF19L1Q69YN2 538 aaKnown RBP23.54■■□□□ 1.36
PNKP-212ENST00000599454 FLCNQ8NFG4 579 aa23.54■■□□□ 1.36
PNKP-212ENST00000599454 RTP3Q9BQQ7 232 aa23.54■■□□□ 1.36
PNKP-212ENST00000599454 COLEC11Q9BWP8 271 aa23.54■■□□□ 1.36
PNKP-212ENST00000599454 NFKBIZQ9BYH8 718 aa23.54■■□□□ 1.36
PNKP-212ENST00000599454 TRIM6Q9C030 488 aaPredicted RBP23.54■■□□□ 1.36
PNKP-212ENST00000599454 BRMS1Q9HCU9 246 aa23.54■■□□□ 1.36
PNKP-212ENST00000599454 WDR6Q9NNW5 1121 aaKnown RBP23.54■■□□□ 1.36
PNKP-212ENST00000599454 FBXL21Q9UKT6 434 aa23.54■■□□□ 1.36
PNKP-212ENST00000599454 CCDC195A0A1B0GUA6 201 aa23.53■■□□□ 1.36
PNKP-212ENST00000599454 ZBTB39O15060 712 aa23.53■■□□□ 1.36
PNKP-212ENST00000599454 PAPLNO95428 1278 aa23.53■■□□□ 1.36
PNKP-212ENST00000599454 KRT2P35908 639 aa23.53■■□□□ 1.36
PNKP-212ENST00000599454 MBTD1Q05BQ5 628 aa23.53■■□□□ 1.36
PNKP-212ENST00000599454 CPB2Q96IY4 423 aa23.53■■□□□ 1.36
PNKP-212ENST00000599454 EIF2AK1Q9BQI3 630 aaKnown RBP23.53■■□□□ 1.36
PNKP-212ENST00000599454 RNF39Q9H2S5 420 aa23.53■■□□□ 1.36
PNKP-212ENST00000599454 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.53■■□□□ 1.36
PNKP-212ENST00000599454 GJB4Q9NTQ9 266 aa23.53■■□□□ 1.36
PNKP-212ENST00000599454 ORC3Q9UBD5 711 aaPredicted RBP23.53■■□□□ 1.36
PNKP-212ENST00000599454 PRR23AA6NEV1 266 aa23.52■■□□□ 1.36
PNKP-212ENST00000599454 ARL2P36404 184 aa23.52■■□□□ 1.36
PNKP-212ENST00000599454 SCNN1GP51170 649 aa23.52■■□□□ 1.36
PNKP-212ENST00000599454 TAS1R1Q7RTX1 841 aa23.52■■□□□ 1.36
PNKP-212ENST00000599454 NXPE3Q969Y0 559 aa23.52■■□□□ 1.36
PNKP-212ENST00000599454 SNX27Q96L92 541 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms