RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 HOXB8P17481 243 aaPredicted RBP25.48■■□□□ 1.67
SSBP4-205ENST00000598159 GJB2P29033 226 aa25.48■■□□□ 1.67
SSBP4-205ENST00000598159 PRPHP41219 470 aa25.48■■□□□ 1.67
SSBP4-205ENST00000598159 AFF1P51825 1210 aaKnown RBP25.48■■□□□ 1.67
SSBP4-205ENST00000598159 RBM10P98175 930 aaKnown RBP25.48■■□□□ 1.67
SSBP4-205ENST00000598159 ECM1Q16610 540 aa25.48■■□□□ 1.67
SSBP4-205ENST00000598159 FAM187BQ17R55 369 aa25.48■■□□□ 1.67
SSBP4-205ENST00000598159 RILPL1Q5EBL4 403 aa25.48■■□□□ 1.67
SSBP4-205ENST00000598159 TMEM31Q5JXX7 168 aa25.48■■□□□ 1.67
SSBP4-205ENST00000598159 ANKRD54Q6NXT1 300 aa25.48■■□□□ 1.67
SSBP4-205ENST00000598159 SLC27A1Q6PCB7 646 aa25.48■■□□□ 1.67
SSBP4-205ENST00000598159 PPP4R3CPQ6ZMV5 832 aa25.48■■□□□ 1.67
SSBP4-205ENST00000598159 TMEM173Q86WV6 379 aaPredicted RBP25.48■■□□□ 1.67
SSBP4-205ENST00000598159 TBC1D32Q96NH3 1257 aa25.48■■□□□ 1.67
SSBP4-205ENST00000598159 ZBP1Q9H171 429 aa25.48■■□□□ 1.67
SSBP4-205ENST00000598159 C2orf40Q9H1Z8 148 aa25.48■■□□□ 1.67
SSBP4-205ENST00000598159 FZD8Q9H461 694 aa25.48■■□□□ 1.67
SSBP4-205ENST00000598159 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.48■■□□□ 1.67
SSBP4-205ENST00000598159 KIAA1024Q9UPX6 916 aa25.48■■□□□ 1.67
SSBP4-205ENST00000598159 GIT1Q9Y2X7 761 aa25.48■■□□□ 1.67
SSBP4-205ENST00000598159 H3BQV1 296 aa25.47■■□□□ 1.67
SSBP4-205ENST00000598159 CD2BP2O95400 341 aaKnown RBP25.47■■□□□ 1.67
SSBP4-205ENST00000598159 PPP2R5AQ15172 486 aa25.47■■□□□ 1.67
SSBP4-205ENST00000598159 CDCA2Q69YH5 1023 aaPredicted RBP25.47■■□□□ 1.67
SSBP4-205ENST00000598159 DTHD1Q6ZMT9 781 aa25.47■■□□□ 1.67
SSBP4-205ENST00000598159 TMEM87AQ8NBN3 555 aa25.47■■□□□ 1.67
SSBP4-205ENST00000598159 CASP10Q92851 521 aa25.47■■□□□ 1.67
SSBP4-205ENST00000598159 RNF39Q9H2S5 420 aa25.47■■□□□ 1.67
SSBP4-205ENST00000598159 DAXXQ9UER7 740 aaPredicted RBP25.47■■□□□ 1.67
SSBP4-205ENST00000598159 USP15Q9Y4E8 981 aaPredicted RBP25.47■■□□□ 1.67
SSBP4-205ENST00000598159 HES2Q9Y543 173 aa25.47■■□□□ 1.67
SSBP4-205ENST00000598159 ARL5CA6NH57 179 aa25.46■■□□□ 1.67
SSBP4-205ENST00000598159 B4GALT5O43286 388 aa25.46■■□□□ 1.67
SSBP4-205ENST00000598159 CLASP2O75122 1294 aaKnown RBP25.46■■□□□ 1.67
SSBP4-205ENST00000598159 CA8P35219 290 aa25.46■■□□□ 1.67
SSBP4-205ENST00000598159 KRT79Q5XKE5 535 aa25.46■■□□□ 1.67
SSBP4-205ENST00000598159 LLGL2Q6P1M3 1020 aa25.46■■□□□ 1.67
SSBP4-205ENST00000598159 SNX29Q8TEQ0 813 aa25.46■■□□□ 1.67
SSBP4-205ENST00000598159 GAD1Q99259 594 aa25.46■■□□□ 1.67
SSBP4-205ENST00000598159 LRFN3Q9BTN0 628 aa25.46■■□□□ 1.67
SSBP4-205ENST00000598159 S1PR5Q9H228 398 aa25.46■■□□□ 1.67
SSBP4-205ENST00000598159 BHMT2Q9H2M3 363 aa25.46■■□□□ 1.67
SSBP4-205ENST00000598159 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.46■■□□□ 1.67
SSBP4-205ENST00000598159 NRP1O14786 923 aa25.45■■□□□ 1.66
SSBP4-205ENST00000598159 NAMPTP43490 491 aa25.45■■□□□ 1.66
SSBP4-205ENST00000598159 BCL7CQ8WUZ0 217 aaPredicted RBP25.45■■□□□ 1.66
SSBP4-205ENST00000598159 SUSD6Q92537 303 aa25.45■■□□□ 1.66
SSBP4-205ENST00000598159 PHF7Q9BWX1 381 aaPredicted RBP25.45■■□□□ 1.66
SSBP4-205ENST00000598159 DDX19AQ9NUU7 478 aaKnown RBP25.45■■□□□ 1.66
SSBP4-205ENST00000598159 DNM3Q9UQ16 869 aa25.45■■□□□ 1.66
SSBP4-205ENST00000598159 SMC3Q9UQE7 1217 aa25.45■■□□□ 1.66
SSBP4-205ENST00000598159 DCXO43602 365 aa25.44■■□□□ 1.66
SSBP4-205ENST00000598159 B4GALT3O60512 393 aa25.44■■□□□ 1.66
SSBP4-205ENST00000598159 NPTXRO95502 500 aa25.44■■□□□ 1.66
SSBP4-205ENST00000598159 MAPK6Q16659 721 aa25.44■■□□□ 1.66
SSBP4-205ENST00000598159 TPRNQ4KMQ1 711 aa25.44■■□□□ 1.66
SSBP4-205ENST00000598159 SYCE2Q6PIF2 218 aa25.44■■□□□ 1.66
SSBP4-205ENST00000598159 COLGALT2Q8IYK4 626 aa25.44■■□□□ 1.66
SSBP4-205ENST00000598159 DEPTORQ8TB45 409 aa25.44■■□□□ 1.66
SSBP4-205ENST00000598159 KIFAP3Q92845 792 aa25.44■■□□□ 1.66
SSBP4-205ENST00000598159 IFT74Q96LB3 600 aa25.44■■□□□ 1.66
SSBP4-205ENST00000598159 APOL6Q9BWW8 343 aa25.44■■□□□ 1.66
SSBP4-205ENST00000598159 MIOSQ9NXC5 875 aa25.44■■□□□ 1.66
SSBP4-205ENST00000598159 HCFC2Q9Y5Z7 792 aa25.44■■□□□ 1.66
SSBP4-205ENST00000598159 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.43■■□□□ 1.66
SSBP4-205ENST00000598159 NR1I2O75469 434 aa25.43■■□□□ 1.66
SSBP4-205ENST00000598159 MLH1P40692 756 aa25.43■■□□□ 1.66
SSBP4-205ENST00000598159 IL17AQ16552 155 aa25.43■■□□□ 1.66
SSBP4-205ENST00000598159 CDR2LQ86X02 465 aaPredicted RBP25.43■■□□□ 1.66
SSBP4-205ENST00000598159 BSNDQ8WZ55 320 aa25.43■■□□□ 1.66
SSBP4-205ENST00000598159 NXF3Q9H4D5 531 aaKnown RBP25.43■■□□□ 1.66
SSBP4-205ENST00000598159 LOC730098B7Z3J9 87 aa25.42■■□□□ 1.66
SSBP4-205ENST00000598159 ACKR2O00590 384 aa25.42■■□□□ 1.66
SSBP4-205ENST00000598159 N4BP3O15049 544 aa25.42■■□□□ 1.66
SSBP4-205ENST00000598159 OR1G1P47890 313 aa25.42■■□□□ 1.66
SSBP4-205ENST00000598159 EFNA5P52803 228 aa25.42■■□□□ 1.66
SSBP4-205ENST00000598159 DSC1Q08554 894 aa25.42■■□□□ 1.66
SSBP4-205ENST00000598159 PRPF4BQ13523 1007 aaKnown RBP25.42■■□□□ 1.66
SSBP4-205ENST00000598159 PPFIBP1Q86W92 1011 aa25.42■■□□□ 1.66
SSBP4-205ENST00000598159 RNF135Q8IUD6 432 aa25.42■■□□□ 1.66
SSBP4-205ENST00000598159 AUTS2Q8WXX7 1259 aa25.42■■□□□ 1.66
SSBP4-205ENST00000598159 ZFP42Q96MM3 310 aa25.42■■□□□ 1.66
SSBP4-205ENST00000598159 C11orf16Q9NQ32 467 aa25.42■■□□□ 1.66
SSBP4-205ENST00000598159 PARP2Q9UGN5 583 aa25.42■■□□□ 1.66
SSBP4-205ENST00000598159 ZMYM2Q9UBW7 1377 aa25.42■■□□□ 1.66
SSBP4-205ENST00000598159 TDRD15B5MCY1 1934 aaKnown RBP25.41■■□□□ 1.66
SSBP4-205ENST00000598159 AKAP5P24588 427 aa25.41■■□□□ 1.66
SSBP4-205ENST00000598159 SCNN1GP51170 649 aa25.41■■□□□ 1.66
SSBP4-205ENST00000598159 ATP2C1P98194 919 aaPredicted RBP25.41■■□□□ 1.66
SSBP4-205ENST00000598159 ITIH3Q06033 890 aa25.41■■□□□ 1.66
SSBP4-205ENST00000598159 CBX2Q14781 532 aaPredicted RBP25.41■■□□□ 1.66
SSBP4-205ENST00000598159 LARP1BQ659C4 914 aaKnown RBP25.41■■□□□ 1.66
SSBP4-205ENST00000598159 KCTD17Q8N5Z5 321 aa25.41■■□□□ 1.66
SSBP4-205ENST00000598159 COLEC11Q9BWP8 271 aa25.41■■□□□ 1.66
SSBP4-205ENST00000598159 VN1R3Q9BXE9 311 aa25.41■■□□□ 1.66
SSBP4-205ENST00000598159 EMILIN2Q9BXX0 1053 aa25.41■■□□□ 1.66
SSBP4-205ENST00000598159 SSX2IPQ9Y2D8 614 aa25.41■■□□□ 1.66
SSBP4-205ENST00000598159 PRKCBP05771 671 aa25.4■■□□□ 1.66
SSBP4-205ENST00000598159 CDC25AP30304 524 aa25.4■■□□□ 1.66
SSBP4-205ENST00000598159 TMEM132AQ24JP5 1023 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms