RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 DBR1Q9UK59 544 aaKnown RBP13.49□□□□□ -0.25
SOX2-OT-228ENST00000597828 SORCS3Q9UPU3 1222 aa13.49□□□□□ -0.25
SOX2-OT-228ENST00000597828 IPPQ9Y573 584 aa13.49□□□□□ -0.25
SOX2-OT-228ENST00000597828 COL4A3Q01955 1670 aa13.49□□□□□ -0.25
SOX2-OT-228ENST00000597828 CACNA1HO95180 2353 aa13.49□□□□□ -0.25
SOX2-OT-228ENST00000597828 POTEMA6NI47 508 aa13.48□□□□□ -0.25
SOX2-OT-228ENST00000597828 ERLIN2O94905 339 aa13.48□□□□□ -0.25
SOX2-OT-228ENST00000597828 NCLP19338 710 aaKnown RBP13.48□□□□□ -0.25
SOX2-OT-228ENST00000597828 AVPR2P30518 371 aa13.48□□□□□ -0.25
SOX2-OT-228ENST00000597828 SCNN1GP51170 649 aa13.48□□□□□ -0.25
SOX2-OT-228ENST00000597828 CLCN4P51793 760 aa13.48□□□□□ -0.25
SOX2-OT-228ENST00000597828 PTPN5P54829 565 aa13.48□□□□□ -0.25
SOX2-OT-228ENST00000597828 MBTD1Q05BQ5 628 aa13.48□□□□□ -0.25
SOX2-OT-228ENST00000597828 MTMR3Q13615 1198 aa13.48□□□□□ -0.25
SOX2-OT-228ENST00000597828 BMS1Q14692 1282 aaKnown RBP13.48□□□□□ -0.25
SOX2-OT-228ENST00000597828 TAS1R1Q7RTX1 841 aa13.48□□□□□ -0.25
SOX2-OT-228ENST00000597828 CABP7Q86V35 215 aa13.48□□□□□ -0.25
SOX2-OT-228ENST00000597828 SLFN12Q8IYM2 578 aa13.48□□□□□ -0.25
SOX2-OT-228ENST00000597828 NSUN7Q8NE18 718 aaKnown RBP13.48□□□□□ -0.25
SOX2-OT-228ENST00000597828 RSPH1Q8WYR4 309 aa13.48□□□□□ -0.25
SOX2-OT-228ENST00000597828 GTF3C6Q969F1 213 aa13.48□□□□□ -0.25
SOX2-OT-228ENST00000597828 RIPOR3Q96MK2 946 aa13.48□□□□□ -0.25
SOX2-OT-228ENST00000597828 FAM193BQ96PV7 902 aaPredicted RBP13.48□□□□□ -0.25
SOX2-OT-228ENST00000597828 GAD1Q99259 594 aa13.48□□□□□ -0.25
SOX2-OT-228ENST00000597828 TMEM175Q9BSA9 504 aa13.48□□□□□ -0.25
SOX2-OT-228ENST00000597828 NXF3Q9H4D5 531 aaKnown RBP13.48□□□□□ -0.25
SOX2-OT-228ENST00000597828 CACNG4Q9UBN1 327 aa13.48□□□□□ -0.25
SOX2-OT-228ENST00000597828 FAN1Q9Y2M0 1017 aa13.48□□□□□ -0.25
SOX2-OT-228ENST00000597828 PPME1Q9Y570 386 aa13.48□□□□□ -0.25
SOX2-OT-228ENST00000597828 SPDYE4A6NLX3 237 aa13.47□□□□□ -0.25
SOX2-OT-228ENST00000597828 BTBD18B2RXH4 712 aa13.47□□□□□ -0.25
SOX2-OT-228ENST00000597828 INO80B-WBP1J3KQ70 363 aa13.47□□□□□ -0.25
SOX2-OT-228ENST00000597828 B4GALT5O43286 388 aa13.47□□□□□ -0.25
SOX2-OT-228ENST00000597828 GAS2O43903 313 aaKnown RBP13.47□□□□□ -0.25
SOX2-OT-228ENST00000597828 LILRB3O75022 631 aa13.47□□□□□ -0.25
SOX2-OT-228ENST00000597828 BAG4O95429 457 aaKnown RBP13.47□□□□□ -0.25
SOX2-OT-228ENST00000597828 ITGA4P13612 1032 aa13.47□□□□□ -0.25
SOX2-OT-228ENST00000597828 ARF4P18085 180 aaPredicted RBP13.47□□□□□ -0.25
SOX2-OT-228ENST00000597828 KLRC2P26717 231 aa13.47□□□□□ -0.25
SOX2-OT-228ENST00000597828 OR1G1P47890 313 aa13.47□□□□□ -0.25
SOX2-OT-228ENST00000597828 PTENP60484 403 aa13.47□□□□□ -0.25
SOX2-OT-228ENST00000597828 GIT2Q14161 759 aa13.47□□□□□ -0.25
SOX2-OT-228ENST00000597828 CALCRLQ16602 461 aa13.47□□□□□ -0.25
SOX2-OT-228ENST00000597828 AMHR2Q16671 573 aa13.47□□□□□ -0.25
SOX2-OT-228ENST00000597828 OTUD6AQ7L8S5 288 aa13.47□□□□□ -0.25
SOX2-OT-228ENST00000597828 COLGALT2Q8IYK4 626 aa13.47□□□□□ -0.25
SOX2-OT-228ENST00000597828 PIGOQ8TEQ8 1089 aa13.47□□□□□ -0.25
SOX2-OT-228ENST00000597828 B3GALT6Q96L58 329 aa13.47□□□□□ -0.25
SOX2-OT-228ENST00000597828 NAP1L4Q99733 375 aaKnown RBP13.47□□□□□ -0.25
SOX2-OT-228ENST00000597828 HERC2P3Q9BVR0 1158 aa13.47□□□□□ -0.25
SOX2-OT-228ENST00000597828 TTC12Q9H892 705 aaPredicted RBP13.47□□□□□ -0.25
SOX2-OT-228ENST00000597828 SFXN1Q9H9B4 322 aa13.47□□□□□ -0.25
SOX2-OT-228ENST00000597828 LIMD1Q9UGP4 676 aa13.47□□□□□ -0.25
SOX2-OT-228ENST00000597828 DMDP11532 3685 aa13.47□□□□□ -0.25
SOX2-OT-228ENST00000597828 VPS13AQ96RL7 3174 aa13.46□□□□□ -0.25
SOX2-OT-228ENST00000597828 ARL5CA6NH57 179 aa13.46□□□□□ -0.25
SOX2-OT-228ENST00000597828 ASAP2O43150 1006 aa13.46□□□□□ -0.25
SOX2-OT-228ENST00000597828 NEMFO60524 1076 aa13.46□□□□□ -0.25
SOX2-OT-228ENST00000597828 USO1O60763 962 aaKnown RBP13.46□□□□□ -0.25
SOX2-OT-228ENST00000597828 SOD2P04179 222 aa13.46□□□□□ -0.25
SOX2-OT-228ENST00000597828 GLRA2P23416 452 aa13.46□□□□□ -0.25
SOX2-OT-228ENST00000597828 TXKP42681 527 aa13.46□□□□□ -0.25
SOX2-OT-228ENST00000597828 RARRES1P49788 294 aa13.46□□□□□ -0.25
SOX2-OT-228ENST00000597828 GUCY1B3Q02153 619 aa13.46□□□□□ -0.25
SOX2-OT-228ENST00000597828 ATAT1Q5SQI0 421 aa13.46□□□□□ -0.25
SOX2-OT-228ENST00000597828 NOTUMQ6P988 496 aa13.46□□□□□ -0.25
SOX2-OT-228ENST00000597828 MAEAQ7L5Y9 396 aa13.46□□□□□ -0.25
SOX2-OT-228ENST00000597828 GPR149Q86SP6 731 aa13.46□□□□□ -0.25
SOX2-OT-228ENST00000597828 DIS3L2Q8IYB7 885 aaKnown RBP13.46□□□□□ -0.25
SOX2-OT-228ENST00000597828 EXOC8Q8IYI6 725 aa13.46□□□□□ -0.25
SOX2-OT-228ENST00000597828 RNF168Q8IYW5 571 aaPredicted RBP13.46□□□□□ -0.25
SOX2-OT-228ENST00000597828 ZDHHC14Q8IZN3 488 aa13.46□□□□□ -0.25
SOX2-OT-228ENST00000597828 TMEM105Q8N8V8 129 aa13.46□□□□□ -0.25
SOX2-OT-228ENST00000597828 WASF1Q92558 559 aa13.46□□□□□ -0.25
SOX2-OT-228ENST00000597828 RABGGTAQ92696 567 aa13.46□□□□□ -0.25
SOX2-OT-228ENST00000597828 POLR3FQ9H1D9 316 aaPredicted RBP13.46□□□□□ -0.25
SOX2-OT-228ENST00000597828 TMEM60Q9H2L4 133 aa13.46□□□□□ -0.25
SOX2-OT-228ENST00000597828 BRMS1Q9HCU9 246 aa13.46□□□□□ -0.25
SOX2-OT-228ENST00000597828 GPRC5CQ9NQ84 441 aa13.46□□□□□ -0.25
SOX2-OT-228ENST00000597828 MAN1C1Q9NR34 630 aa13.46□□□□□ -0.25
SOX2-OT-228ENST00000597828 PCDHA12Q9UN75 941 aa13.46□□□□□ -0.25
SOX2-OT-228ENST00000597828 TCHHQ07283 1943 aa13.46□□□□□ -0.25
SOX2-OT-228ENST00000597828 H0Y858 1186 aa13.45□□□□□ -0.26
SOX2-OT-228ENST00000597828 NPTXRO95502 500 aa13.45□□□□□ -0.26
SOX2-OT-228ENST00000597828 ALDH2P05091 517 aa13.45□□□□□ -0.26
SOX2-OT-228ENST00000597828 URODP06132 367 aa13.45□□□□□ -0.26
SOX2-OT-228ENST00000597828 AKAP5P24588 427 aa13.45□□□□□ -0.26
SOX2-OT-228ENST00000597828 ARL2P36404 184 aa13.45□□□□□ -0.26
SOX2-OT-228ENST00000597828 ANAPC15P60006 121 aa13.45□□□□□ -0.26
SOX2-OT-228ENST00000597828 DSC1Q08554 894 aa13.45□□□□□ -0.26
SOX2-OT-228ENST00000597828 MXD4Q14582 209 aaPredicted RBP13.45□□□□□ -0.26
SOX2-OT-228ENST00000597828 ANKRD1Q15327 319 aa13.45□□□□□ -0.26
SOX2-OT-228ENST00000597828 PPFIBP1Q86W92 1011 aa13.45□□□□□ -0.26
SOX2-OT-228ENST00000597828 IFNLR1Q8IU57 520 aaPredicted RBP13.45□□□□□ -0.26
SOX2-OT-228ENST00000597828 GLYCTKQ8IVS8 523 aa13.45□□□□□ -0.26
SOX2-OT-228ENST00000597828 HSD17B14Q9BPX1 270 aa13.45□□□□□ -0.26
SOX2-OT-228ENST00000597828 EMILIN2Q9BXX0 1053 aa13.45□□□□□ -0.26
SOX2-OT-228ENST00000597828 CSRNP2Q9H175 543 aa13.45□□□□□ -0.26
SOX2-OT-228ENST00000597828 MRPL17Q9NRX2 175 aaKnown RBP13.45□□□□□ -0.26
SOX2-OT-228ENST00000597828 KLK14Q9P0G3 267 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms