RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 UBN1Q9NPG3 1134 aa11.78□□□□□ -0.52
CHMP2A-202ENST00000596708 GJB4Q9NTQ9 266 aa11.78□□□□□ -0.52
CHMP2A-202ENST00000596708 SSX2IPQ9Y2D8 614 aa11.78□□□□□ -0.52
CHMP2A-202ENST00000596708 PRG3Q9Y2Y8 225 aaPredicted RBP11.78□□□□□ -0.52
CHMP2A-202ENST00000596708 INO80B-WBP1J3KQ70 363 aa11.77□□□□□ -0.53
CHMP2A-202ENST00000596708 ZBTB39O15060 712 aa11.77□□□□□ -0.53
CHMP2A-202ENST00000596708 SOD2P04179 222 aa11.77□□□□□ -0.53
CHMP2A-202ENST00000596708 MYBP10242 640 aa11.77□□□□□ -0.53
CHMP2A-202ENST00000596708 AXLP30530 894 aa11.77□□□□□ -0.53
CHMP2A-202ENST00000596708 ASTLQ6HA08 431 aaPredicted RBP11.77□□□□□ -0.53
CHMP2A-202ENST00000596708 SLFN12Q8IYM2 578 aa11.77□□□□□ -0.53
CHMP2A-202ENST00000596708 SMG8Q8ND04 991 aaKnown RBP11.77□□□□□ -0.53
CHMP2A-202ENST00000596708 OXER1Q8TDS5 423 aa11.77□□□□□ -0.53
CHMP2A-202ENST00000596708 CPB2Q96IY4 423 aa11.77□□□□□ -0.53
CHMP2A-202ENST00000596708 GAD1Q99259 594 aa11.77□□□□□ -0.53
CHMP2A-202ENST00000596708 APOL6Q9BWW8 343 aa11.77□□□□□ -0.53
CHMP2A-202ENST00000596708 EIF2AQ9BY44 585 aaKnown RBP11.77□□□□□ -0.53
CHMP2A-202ENST00000596708 IPPQ9Y573 584 aa11.77□□□□□ -0.53
CHMP2A-202ENST00000596708 STK36Q9NRP7 1315 aa11.77□□□□□ -0.53
CHMP2A-202ENST00000596708 FAM186AA6NE01 2351 aa11.76□□□□□ -0.53
CHMP2A-202ENST00000596708 LILRB3O75022 631 aa11.76□□□□□ -0.53
CHMP2A-202ENST00000596708 NR1I2O75469 434 aa11.76□□□□□ -0.53
CHMP2A-202ENST00000596708 SLITRK3O94933 977 aa11.76□□□□□ -0.53
CHMP2A-202ENST00000596708 ADH1AP07327 375 aa11.76□□□□□ -0.53
CHMP2A-202ENST00000596708 PTENP60484 403 aa11.76□□□□□ -0.53
CHMP2A-202ENST00000596708 TDGQ13569 410 aa11.76□□□□□ -0.53
CHMP2A-202ENST00000596708 TFDP1Q14186 410 aa11.76□□□□□ -0.53
CHMP2A-202ENST00000596708 MXD4Q14582 209 aaPredicted RBP11.76□□□□□ -0.53
CHMP2A-202ENST00000596708 EARS2Q5JPH6 523 aaKnown RBP11.76□□□□□ -0.53
CHMP2A-202ENST00000596708 NOTUMQ6P988 496 aa11.76□□□□□ -0.53
CHMP2A-202ENST00000596708 ELMSAN1Q6PJG2 1045 aa11.76□□□□□ -0.53
CHMP2A-202ENST00000596708 TAS1R1Q7RTX1 841 aa11.76□□□□□ -0.53
CHMP2A-202ENST00000596708 COLGALT2Q8IYK4 626 aa11.76□□□□□ -0.53
CHMP2A-202ENST00000596708 WASF1Q92558 559 aa11.76□□□□□ -0.53
CHMP2A-202ENST00000596708 CCDC43Q96MW1 224 aaKnown RBP11.76□□□□□ -0.53
CHMP2A-202ENST00000596708 HERC2P3Q9BVR0 1158 aa11.76□□□□□ -0.53
CHMP2A-202ENST00000596708 TRIM6Q9C030 488 aaPredicted RBP11.76□□□□□ -0.53
CHMP2A-202ENST00000596708 RNF39Q9H2S5 420 aa11.76□□□□□ -0.53
CHMP2A-202ENST00000596708 BRMS1Q9HCU9 246 aa11.76□□□□□ -0.53
CHMP2A-202ENST00000596708 MAN1C1Q9NR34 630 aa11.76□□□□□ -0.53
CHMP2A-202ENST00000596708 MIOSQ9NXC5 875 aa11.76□□□□□ -0.53
CHMP2A-202ENST00000596708 ORC3Q9UBD5 711 aaPredicted RBP11.76□□□□□ -0.53
CHMP2A-202ENST00000596708 FBXL21Q9UKT6 434 aa11.76□□□□□ -0.53
CHMP2A-202ENST00000596708 HES2Q9Y543 173 aa11.76□□□□□ -0.53
CHMP2A-202ENST00000596708 MIA3Q5JRA6 1907 aa11.76□□□□□ -0.53
CHMP2A-202ENST00000596708 MYH15Q9Y2K3 1946 aa11.76□□□□□ -0.53
CHMP2A-202ENST00000596708 CCDC195A0A1B0GUA6 201 aa11.75□□□□□ -0.53
CHMP2A-202ENST00000596708 INPPL1O15357 1258 aa11.75□□□□□ -0.53
CHMP2A-202ENST00000596708 TEX28O15482 410 aa11.75□□□□□ -0.53
CHMP2A-202ENST00000596708 TSPAN1O60635 241 aa11.75□□□□□ -0.53
CHMP2A-202ENST00000596708 PFKFB2O60825 505 aa11.75□□□□□ -0.53
CHMP2A-202ENST00000596708 GBP2P32456 591 aaPredicted RBP11.75□□□□□ -0.53
CHMP2A-202ENST00000596708 KRT2P35908 639 aa11.75□□□□□ -0.53
CHMP2A-202ENST00000596708 MLH1P40692 756 aa11.75□□□□□ -0.53
CHMP2A-202ENST00000596708 GLUD2P49448 558 aa11.75□□□□□ -0.53
CHMP2A-202ENST00000596708 SCNN1GP51170 649 aa11.75□□□□□ -0.53
CHMP2A-202ENST00000596708 CLCN5P51795 746 aa11.75□□□□□ -0.53
CHMP2A-202ENST00000596708 PCBP1Q15365 356 aaKnown RBP eCLIP11.75□□□□□ -0.53
CHMP2A-202ENST00000596708 C15orf39Q6ZRI6 1047 aa11.75□□□□□ -0.53
CHMP2A-202ENST00000596708 HACE1Q8IYU2 909 aa11.75□□□□□ -0.53
CHMP2A-202ENST00000596708 CCDC51Q96ER9 411 aa11.75□□□□□ -0.53
CHMP2A-202ENST00000596708 RPS6KC1Q96S38 1066 aa11.75□□□□□ -0.53
CHMP2A-202ENST00000596708 EIF2AK1Q9BQI3 630 aaKnown RBP11.75□□□□□ -0.53
CHMP2A-202ENST00000596708 COLEC11Q9BWP8 271 aa11.75□□□□□ -0.53
CHMP2A-202ENST00000596708 CSRNP2Q9H175 543 aa11.75□□□□□ -0.53
CHMP2A-202ENST00000596708 KCNK12Q9HB15 430 aa11.75□□□□□ -0.53
CHMP2A-202ENST00000596708 XPNPEP1Q9NQW7 623 aa11.75□□□□□ -0.53
CHMP2A-202ENST00000596708 MARCH5Q9NX47 278 aa11.75□□□□□ -0.53
CHMP2A-202ENST00000596708 DPP7Q9UHL4 492 aa11.75□□□□□ -0.53
CHMP2A-202ENST00000596708 TPCN1Q9ULQ1 816 aa11.75□□□□□ -0.53
CHMP2A-202ENST00000596708 PCDHA12Q9UN75 941 aa11.75□□□□□ -0.53
CHMP2A-202ENST00000596708 VWA8A3KMH1 1905 aa11.74□□□□□ -0.53
CHMP2A-202ENST00000596708 FAM205CA6NFA0 338 aa11.74□□□□□ -0.53
CHMP2A-202ENST00000596708 ARL5CA6NH57 179 aa11.74□□□□□ -0.53
CHMP2A-202ENST00000596708 STK25O00506 426 aa11.74□□□□□ -0.53
CHMP2A-202ENST00000596708 DGAT1O75907 488 aa11.74□□□□□ -0.53
CHMP2A-202ENST00000596708 GLUD1P00367 558 aa11.74□□□□□ -0.53
CHMP2A-202ENST00000596708 SPATA31D3P0C874 917 aa11.74□□□□□ -0.53
CHMP2A-202ENST00000596708 SPIRE1Q08AE8 756 aa11.74□□□□□ -0.53
CHMP2A-202ENST00000596708 NR5A1Q13285 461 aa11.74□□□□□ -0.53
CHMP2A-202ENST00000596708 CALCRLQ16602 461 aa11.74□□□□□ -0.53
CHMP2A-202ENST00000596708 KIAA0319Q5VV43 1072 aa11.74□□□□□ -0.53
CHMP2A-202ENST00000596708 SPATA31D4Q6ZUB0 917 aa11.74□□□□□ -0.53
CHMP2A-202ENST00000596708 PALB2Q86YC2 1186 aa11.74□□□□□ -0.53
CHMP2A-202ENST00000596708 GLYCTKQ8IVS8 523 aa11.74□□□□□ -0.53
CHMP2A-202ENST00000596708 CMASQ8NFW8 434 aaPredicted RBP11.74□□□□□ -0.53
CHMP2A-202ENST00000596708 ASAP3Q8TDY4 903 aa11.74□□□□□ -0.53
CHMP2A-202ENST00000596708 STAMQ92783 540 aa11.74□□□□□ -0.53
CHMP2A-202ENST00000596708 ZFP42Q96MM3 310 aa11.74□□□□□ -0.53
CHMP2A-202ENST00000596708 PIDD1Q9HB75 910 aa11.74□□□□□ -0.53
CHMP2A-202ENST00000596708 IGSF9Q9P2J2 1179 aa11.74□□□□□ -0.53
CHMP2A-202ENST00000596708 PARP2Q9UGN5 583 aa11.74□□□□□ -0.53
CHMP2A-202ENST00000596708 DUSP12Q9UNI6 340 aa11.74□□□□□ -0.53
CHMP2A-202ENST00000596708 GIT1Q9Y2X7 761 aa11.74□□□□□ -0.53
CHMP2A-202ENST00000596708 MYH11P35749 1972 aa11.74□□□□□ -0.53
CHMP2A-202ENST00000596708 A0A087WWV3 80 aa11.73□□□□□ -0.53
CHMP2A-202ENST00000596708 PROB1E7EW31 1015 aa11.73□□□□□ -0.53
CHMP2A-202ENST00000596708 CITO14578 2027 aa11.73□□□□□ -0.53
CHMP2A-202ENST00000596708 PI15O43692 258 aa11.73□□□□□ -0.53
CHMP2A-202ENST00000596708 CTDNEP1O95476 244 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms