RNA–Protein interactions for RNA: ENST00000596348.2

SCN1B-204, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 1,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-204ENST00000596348 DHX58Q96C10 678 aa16.5■□□□□ 0.23
SCN1B-204ENST00000596348 SAMD11Q96NU1 681 aa16.5■□□□□ 0.23
SCN1B-204ENST00000596348 FIZ1Q96SL8 496 aa16.5■□□□□ 0.23
SCN1B-204ENST00000596348 TMEM134Q9H6X4 195 aa16.5■□□□□ 0.23
SCN1B-204ENST00000596348 CWH43Q9H720 699 aa16.5■□□□□ 0.23
SCN1B-204ENST00000596348 PARVGQ9HBI0 331 aa16.5■□□□□ 0.23
SCN1B-204ENST00000596348 TYW1Q9NV66 732 aaKnown RBP16.5■□□□□ 0.23
SCN1B-204ENST00000596348 LARSQ9P2J5 1176 aaKnown RBP16.5■□□□□ 0.23
SCN1B-204ENST00000596348 RBM19Q9Y4C8 960 aaKnown RBP16.5■□□□□ 0.23
SCN1B-204ENST00000596348 ATG2AQ2TAZ0 1938 aa16.49■□□□□ 0.23
SCN1B-204ENST00000596348 POLR2DO15514 142 aaKnown RBP16.49■□□□□ 0.23
SCN1B-204ENST00000596348 TBCAO75347 108 aaKnown RBP16.49■□□□□ 0.23
SCN1B-204ENST00000596348 AFF1P51825 1210 aaKnown RBP16.49■□□□□ 0.23
SCN1B-204ENST00000596348 NCKAP1LP55160 1127 aa16.49■□□□□ 0.23
SCN1B-204ENST00000596348 ABI1Q8IZP0 508 aa16.49■□□□□ 0.23
SCN1B-204ENST00000596348 MYCT1Q8N699 235 aa16.49■□□□□ 0.23
SCN1B-204ENST00000596348 GAS2L1Q99501 681 aaPredicted RBP16.49■□□□□ 0.23
SCN1B-204ENST00000596348 SCAND2PQ9GZW5 306 aaPredicted RBP16.49■□□□□ 0.23
SCN1B-204ENST00000596348 ZHX3Q9H4I2 956 aa16.49■□□□□ 0.23
SCN1B-204ENST00000596348 KBTBD4Q9NVX7 518 aa16.49■□□□□ 0.23
SCN1B-204ENST00000596348 C5orf67F2Z3F1 127 aa16.48■□□□□ 0.23
SCN1B-204ENST00000596348 N4BP3O15049 544 aa16.48■□□□□ 0.23
SCN1B-204ENST00000596348 OFD1O75665 1012 aa16.48■□□□□ 0.23
SCN1B-204ENST00000596348 CMA1P23946 247 aa16.48■□□□□ 0.23
SCN1B-204ENST00000596348 SMTNP53814 917 aa16.48■□□□□ 0.23
SCN1B-204ENST00000596348 TMEM132AQ24JP5 1023 aa16.48■□□□□ 0.23
SCN1B-204ENST00000596348 ATF7IP2Q5U623 682 aa16.48■□□□□ 0.23
SCN1B-204ENST00000596348 ADALQ6DHV7 355 aa16.48■□□□□ 0.23
SCN1B-204ENST00000596348 GLB1LQ6UWU2 654 aa16.48■□□□□ 0.23
SCN1B-204ENST00000596348 HAUS6Q7Z4H7 955 aa16.48■□□□□ 0.23
SCN1B-204ENST00000596348 SFR1Q86XK3 245 aa16.48■□□□□ 0.23
SCN1B-204ENST00000596348 LRRC43Q8N309 656 aa16.48■□□□□ 0.23
SCN1B-204ENST00000596348 IQUBQ8NA54 791 aa16.48■□□□□ 0.23
SCN1B-204ENST00000596348 KCNN1Q92952 543 aa16.48■□□□□ 0.23
SCN1B-204ENST00000596348 PGBD4Q96DM1 585 aa16.48■□□□□ 0.23
SCN1B-204ENST00000596348 ACO2Q99798 780 aaKnown RBP16.48■□□□□ 0.23
SCN1B-204ENST00000596348 TARS2Q9BW92 718 aaKnown RBP16.48■□□□□ 0.23
SCN1B-204ENST00000596348 APOL6Q9BWW8 343 aa16.48■□□□□ 0.23
SCN1B-204ENST00000596348 RSAD1Q9HA92 442 aa16.48■□□□□ 0.23
SCN1B-204ENST00000596348 FAM13BQ9NYF5 915 aa16.48■□□□□ 0.23
SCN1B-204ENST00000596348 KCNH3Q9ULD8 1083 aa16.48■□□□□ 0.23
SCN1B-204ENST00000596348 INPP5FQ9Y2H2 1132 aa16.48■□□□□ 0.23
SCN1B-204ENST00000596348 PLXNA4Q9HCM2 1894 aa16.48■□□□□ 0.23
SCN1B-204ENST00000596348 A0A1B0GVL5 298 aa16.47■□□□□ 0.23
SCN1B-204ENST00000596348 H3BNC9 293 aa16.47■□□□□ 0.23
SCN1B-204ENST00000596348 K7ENM7 598 aa16.47■□□□□ 0.23
SCN1B-204ENST00000596348 ABLIM1O14639 778 aa16.47■□□□□ 0.23
SCN1B-204ENST00000596348 B4GALT3O60512 393 aa16.47■□□□□ 0.23
SCN1B-204ENST00000596348 ITGA4P13612 1032 aa16.47■□□□□ 0.23
SCN1B-204ENST00000596348 PFKFB1P16118 471 aa16.47■□□□□ 0.23
SCN1B-204ENST00000596348 IGFBP4P22692 258 aa16.47■□□□□ 0.23
SCN1B-204ENST00000596348 NMT1P30419 496 aaKnown RBP16.47■□□□□ 0.23
SCN1B-204ENST00000596348 PBX3P40426 434 aa16.47■□□□□ 0.23
SCN1B-204ENST00000596348 NOMO2Q5JPE7 1267 aa16.47■□□□□ 0.23
SCN1B-204ENST00000596348 COLGALT1Q8NBJ5 622 aa16.47■□□□□ 0.23
SCN1B-204ENST00000596348 CNNM3Q8NE01 707 aa16.47■□□□□ 0.23
SCN1B-204ENST00000596348 MRPL4Q9BYD3 311 aaKnown RBP16.47■□□□□ 0.23
SCN1B-204ENST00000596348 TRIM6Q9C030 488 aaPredicted RBP16.47■□□□□ 0.23
SCN1B-204ENST00000596348 TNMDQ9H2S6 317 aa16.47■□□□□ 0.23
SCN1B-204ENST00000596348 CUEDC2Q9H467 287 aa16.47■□□□□ 0.23
SCN1B-204ENST00000596348 PTPRHQ9HD43 1115 aa16.47■□□□□ 0.23
SCN1B-204ENST00000596348 TBC1D13Q9NVG8 400 aa16.47■□□□□ 0.23
SCN1B-204ENST00000596348 CIZ1Q9ULV3 898 aaPredicted RBP16.47■□□□□ 0.23
SCN1B-204ENST00000596348 HPSEQ9Y251 543 aa16.47■□□□□ 0.23
SCN1B-204ENST00000596348 TNFSF13BQ9Y275 285 aa16.47■□□□□ 0.23
SCN1B-204ENST00000596348 RWDD3Q9Y3V2 267 aa16.47■□□□□ 0.23
SCN1B-204ENST00000596348 MTCH2Q9Y6C9 303 aa16.47■□□□□ 0.23
SCN1B-204ENST00000596348 TRIP11Q15643 1979 aa16.47■□□□□ 0.23
SCN1B-204ENST00000596348 FRMD3A2A2Y4 597 aa16.46■□□□□ 0.23
SCN1B-204ENST00000596348 GRM6O15303 877 aa16.46■□□□□ 0.23
SCN1B-204ENST00000596348 TRAK2O60296 914 aa16.46■□□□□ 0.23
SCN1B-204ENST00000596348 ITGB1P05556 798 aa16.46■□□□□ 0.23
SCN1B-204ENST00000596348 RB1P06400 928 aa16.46■□□□□ 0.23
SCN1B-204ENST00000596348 POU3F3P20264 500 aaPredicted RBP16.46■□□□□ 0.23
SCN1B-204ENST00000596348 AKAP5P24588 427 aa16.46■□□□□ 0.23
SCN1B-204ENST00000596348 MLH1P40692 756 aa16.46■□□□□ 0.23
SCN1B-204ENST00000596348 GPM6BQ13491 265 aa16.46■□□□□ 0.23
SCN1B-204ENST00000596348 SPOUT1Q5T280 376 aaKnown RBP16.46■□□□□ 0.23
SCN1B-204ENST00000596348 FAM178BQ8IXR5 827 aa16.46■□□□□ 0.23
SCN1B-204ENST00000596348 ZFP42Q96MM3 310 aa16.46■□□□□ 0.23
SCN1B-204ENST00000596348 GAD1Q99259 594 aa16.46■□□□□ 0.23
SCN1B-204ENST00000596348 C11orf84Q9BUA3 381 aaPredicted RBP16.46■□□□□ 0.23
SCN1B-204ENST00000596348 PLVAPQ9BX97 442 aa16.46■□□□□ 0.23
SCN1B-204ENST00000596348 MRPL9Q9BYD2 267 aaKnown RBP16.46■□□□□ 0.23
SCN1B-204ENST00000596348 TRIM9Q9C026 710 aa16.46■□□□□ 0.23
SCN1B-204ENST00000596348 CDT1Q9H211 546 aa16.46■□□□□ 0.23
SCN1B-204ENST00000596348 KCNG1Q9UIX4 513 aa16.46■□□□□ 0.23
SCN1B-204ENST00000596348 TDRD15B5MCY1 1934 aaKnown RBP16.46■□□□□ 0.23
SCN1B-204ENST00000596348 FAM237AA0A1B0GTK4 181 aa16.45■□□□□ 0.22
SCN1B-204ENST00000596348 ARL5CA6NH57 179 aa16.45■□□□□ 0.22
SCN1B-204ENST00000596348 INPPL1O15357 1258 aa16.45■□□□□ 0.22
SCN1B-204ENST00000596348 ACTN4O43707 911 aaKnown RBP16.45■□□□□ 0.22
SCN1B-204ENST00000596348 IDEP14735 1019 aa16.45■□□□□ 0.22
SCN1B-204ENST00000596348 LAG3P18627 525 aa16.45■□□□□ 0.22
SCN1B-204ENST00000596348 PROZP22891 400 aa16.45■□□□□ 0.22
SCN1B-204ENST00000596348 CASP1P29466 404 aa16.45■□□□□ 0.22
SCN1B-204ENST00000596348 STRN3Q13033 797 aa16.45■□□□□ 0.22
SCN1B-204ENST00000596348 DCAF4L1Q3SXM0 396 aa16.45■□□□□ 0.22
SCN1B-204ENST00000596348 TPRNQ4KMQ1 711 aa16.45■□□□□ 0.22
SCN1B-204ENST00000596348 ZC2HC1CQ53FD0 456 aaPredicted RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms