RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 KIF13BQ9NQT8 1826 aa18.68■□□□□ 0.58
ARHGEF1-213ENST00000595897 TMEM120BA0PK00 339 aa18.68■□□□□ 0.58
ARHGEF1-213ENST00000595897 HGSO14964 777 aaPredicted RBP18.68■□□□□ 0.58
ARHGEF1-213ENST00000595897 SLITRK3O94933 977 aa18.68■□□□□ 0.58
ARHGEF1-213ENST00000595897 ECEL1O95672 775 aa18.68■□□□□ 0.58
ARHGEF1-213ENST00000595897 NFIL3Q16649 462 aa18.68■□□□□ 0.58
ARHGEF1-213ENST00000595897 ART4Q93070 314 aa18.68■□□□□ 0.58
ARHGEF1-213ENST00000595897 RPS6KC1Q96S38 1066 aa18.68■□□□□ 0.58
ARHGEF1-213ENST00000595897 DDX23Q9BUQ8 820 aaKnown RBP18.68■□□□□ 0.58
ARHGEF1-213ENST00000595897 BBOX1O75936 387 aa18.68■□□□□ 0.58
ARHGEF1-213ENST00000595897 RFX1P22670 979 aa18.68■□□□□ 0.58
ARHGEF1-213ENST00000595897 CIITAP33076 1130 aa18.68■□□□□ 0.58
ARHGEF1-213ENST00000595897 HADHBP55084 474 aaKnown RBP18.68■□□□□ 0.58
ARHGEF1-213ENST00000595897 RIPK1Q13546 671 aa18.68■□□□□ 0.58
ARHGEF1-213ENST00000595897 CRYMQ14894 314 aa18.68■□□□□ 0.58
ARHGEF1-213ENST00000595897 SLC13A5Q86YT5 568 aaPredicted RBP18.68■□□□□ 0.58
ARHGEF1-213ENST00000595897 CERS5Q8N5B7 392 aa18.68■□□□□ 0.58
ARHGEF1-213ENST00000595897 KLHL29Q96CT2 875 aa18.68■□□□□ 0.58
ARHGEF1-213ENST00000595897 WNT8AQ9H1J5 351 aa18.68■□□□□ 0.58
ARHGEF1-213ENST00000595897 PCIF1Q9H4Z3 704 aa18.68■□□□□ 0.58
ARHGEF1-213ENST00000595897 EMSYQ7Z589 1322 aa18.67■□□□□ 0.58
ARHGEF1-213ENST00000595897 NQO1P15559 274 aaKnown RBP18.67■□□□□ 0.58
ARHGEF1-213ENST00000595897 PEX5P50542 639 aa18.67■□□□□ 0.58
ARHGEF1-213ENST00000595897 ICA1Q05084 483 aa18.67■□□□□ 0.58
ARHGEF1-213ENST00000595897 ZFPM1Q8IX07 1006 aa18.67■□□□□ 0.58
ARHGEF1-213ENST00000595897 BTBD6Q96KE9 485 aa18.67■□□□□ 0.58
ARHGEF1-213ENST00000595897 ROPN1BQ9BZX4 212 aaPredicted RBP18.67■□□□□ 0.58
ARHGEF1-213ENST00000595897 CDC42EP4Q9H3Q1 356 aaKnown RBP18.67■□□□□ 0.58
ARHGEF1-213ENST00000595897 ROPN1Q9HAT0 212 aaPredicted RBP18.67■□□□□ 0.58
ARHGEF1-213ENST00000595897 SEL1LQ9UBV2 794 aa18.67■□□□□ 0.58
ARHGEF1-213ENST00000595897 PCDHA3Q9Y5H8 950 aa18.67■□□□□ 0.58
ARHGEF1-213ENST00000595897 F5H6K3 240 aa18.67■□□□□ 0.58
ARHGEF1-213ENST00000595897 ANP32DO95626 131 aa18.67■□□□□ 0.58
ARHGEF1-213ENST00000595897 RARAP10276 462 aa18.67■□□□□ 0.58
ARHGEF1-213ENST00000595897 CACNB3P54284 484 aa18.67■□□□□ 0.58
ARHGEF1-213ENST00000595897 ZKSCAN8Q15776 578 aaPredicted RBP18.67■□□□□ 0.58
ARHGEF1-213ENST00000595897 MFSD5Q6N075 450 aa18.67■□□□□ 0.58
ARHGEF1-213ENST00000595897 TLDC1Q6P9B6 456 aa18.67■□□□□ 0.58
ARHGEF1-213ENST00000595897 CYFIP1Q7L576 1253 aa18.67■□□□□ 0.58
ARHGEF1-213ENST00000595897 GDAP1Q8TB36 358 aa18.67■□□□□ 0.58
ARHGEF1-213ENST00000595897 CCHCR1Q8TD31 782 aa18.67■□□□□ 0.58
ARHGEF1-213ENST00000595897 FAM212AQ96EL1 285 aa18.67■□□□□ 0.58
ARHGEF1-213ENST00000595897 POP1Q99575 1024 aaKnown RBP18.67■□□□□ 0.58
ARHGEF1-213ENST00000595897 TUFT1Q9NNX1 390 aa18.67■□□□□ 0.58
ARHGEF1-213ENST00000595897 DMAC2Q9NW81 257 aa18.67■□□□□ 0.58
ARHGEF1-213ENST00000595897 ASIC3Q9UHC3 531 aa18.67■□□□□ 0.58
ARHGEF1-213ENST00000595897 STK38LQ9Y2H1 464 aa18.67■□□□□ 0.58
ARHGEF1-213ENST00000595897 COL24A1Q17RW2 1714 aa18.67■□□□□ 0.58
ARHGEF1-213ENST00000595897 IGF2BP3O00425 579 aaKnown RBP eCLIP18.66■□□□□ 0.58
ARHGEF1-213ENST00000595897 DLG4P78352 724 aa18.66■□□□□ 0.58
ARHGEF1-213ENST00000595897 TRMT10CQ7L0Y3 403 aaKnown RBP18.66■□□□□ 0.58
ARHGEF1-213ENST00000595897 ARHGEF19Q8IW93 802 aa18.66■□□□□ 0.58
ARHGEF1-213ENST00000595897 KIF2BQ8N4N8 673 aa18.66■□□□□ 0.58
ARHGEF1-213ENST00000595897 AGAP11Q8TF27 550 aa18.66■□□□□ 0.58
ARHGEF1-213ENST00000595897 DNAJC17Q9NVM6 304 aaKnown RBP18.66■□□□□ 0.58
ARHGEF1-213ENST00000595897 RTN2O75298 545 aa18.66■□□□□ 0.58
ARHGEF1-213ENST00000595897 CREB1P16220 341 aa18.66■□□□□ 0.58
ARHGEF1-213ENST00000595897 GCLMP48507 274 aa18.66■□□□□ 0.58
ARHGEF1-213ENST00000595897 NCALDP61601 193 aa18.66■□□□□ 0.58
ARHGEF1-213ENST00000595897 SNX1Q13596 522 aa18.66■□□□□ 0.58
ARHGEF1-213ENST00000595897 ZNF268Q14587 947 aaPredicted RBP18.66■□□□□ 0.58
ARHGEF1-213ENST00000595897 RNF207Q6ZRF8 634 aa18.66■□□□□ 0.58
ARHGEF1-213ENST00000595897 MAEAQ7L5Y9 396 aa18.66■□□□□ 0.58
ARHGEF1-213ENST00000595897 OTOP1Q7RTM1 612 aa18.66■□□□□ 0.58
ARHGEF1-213ENST00000595897 GBP7Q8N8V2 638 aaPredicted RBP18.66■□□□□ 0.58
ARHGEF1-213ENST00000595897 DNAJC18Q9H819 358 aa18.66■□□□□ 0.58
ARHGEF1-213ENST00000595897 NYAP2Q9P242 653 aa18.66■□□□□ 0.58
ARHGEF1-213ENST00000595897 DLATP10515 647 aaKnown RBP18.66■□□□□ 0.58
ARHGEF1-213ENST00000595897 ATP5DP30049 168 aa18.66■□□□□ 0.58
ARHGEF1-213ENST00000595897 ALDH5A1P51649 535 aaPredicted RBP18.66■□□□□ 0.58
ARHGEF1-213ENST00000595897 FAM182BQ5T319 152 aa18.66■□□□□ 0.58
ARHGEF1-213ENST00000595897 SYDE2Q5VT97 1194 aa18.66■□□□□ 0.58
ARHGEF1-213ENST00000595897 FAM196AQ6ZSG2 479 aa18.66■□□□□ 0.58
ARHGEF1-213ENST00000595897 ZNF564Q8TBZ8 553 aaPredicted RBP18.66■□□□□ 0.58
ARHGEF1-213ENST00000595897 TEKT1Q969V4 418 aa18.66■□□□□ 0.58
ARHGEF1-213ENST00000595897 FIZ1Q96SL8 496 aa18.66■□□□□ 0.58
ARHGEF1-213ENST00000595897 GAS7O60861 476 aa18.65■□□□□ 0.58
ARHGEF1-213ENST00000595897 CRY2Q49AN0 593 aa18.65■□□□□ 0.58
ARHGEF1-213ENST00000595897 TNFAIP8L3Q5GJ75 292 aa18.65■□□□□ 0.58
ARHGEF1-213ENST00000595897 MIGA2Q7L4E1 593 aa18.65■□□□□ 0.58
ARHGEF1-213ENST00000595897 CPNE8Q86YQ8 564 aa18.65■□□□□ 0.58
ARHGEF1-213ENST00000595897 TEX2Q8IWB9 1127 aa18.65■□□□□ 0.58
ARHGEF1-213ENST00000595897 BANK1Q8NDB2 785 aa18.65■□□□□ 0.58
ARHGEF1-213ENST00000595897 LMO3Q8TAP4 145 aa18.65■□□□□ 0.58
ARHGEF1-213ENST00000595897 C1orf54Q8WWF1 131 aa18.65■□□□□ 0.58
ARHGEF1-213ENST00000595897 MKL1Q969V6 931 aa18.65■□□□□ 0.58
ARHGEF1-213ENST00000595897 NUP85Q9BW27 656 aa18.65■□□□□ 0.58
ARHGEF1-213ENST00000595897 EBF2Q9HAK2 575 aa18.65■□□□□ 0.58
ARHGEF1-213ENST00000595897 CFBP00751 764 aa18.65■□□□□ 0.58
ARHGEF1-213ENST00000595897 ALAS1P13196 640 aa18.65■□□□□ 0.58
ARHGEF1-213ENST00000595897 ZNF131P52739 623 aa18.65■□□□□ 0.58
ARHGEF1-213ENST00000595897 KCTD17Q8N5Z5 321 aa18.65■□□□□ 0.58
ARHGEF1-213ENST00000595897 ZC3H12CQ9C0D7 883 aaKnown RBP18.65■□□□□ 0.58
ARHGEF1-213ENST00000595897 SUGT1Q9Y2Z0 365 aa18.65■□□□□ 0.58
ARHGEF1-213ENST00000595897 UBE4BO95155 1302 aa18.64■□□□□ 0.58
ARHGEF1-213ENST00000595897 G3V3G9 751 aa18.64■□□□□ 0.57
ARHGEF1-213ENST00000595897 CLDN3O15551 220 aa18.64■□□□□ 0.57
ARHGEF1-213ENST00000595897 SGPL1O95470 568 aa18.64■□□□□ 0.57
ARHGEF1-213ENST00000595897 RWDD2BP57060 319 aa18.64■□□□□ 0.57
ARHGEF1-213ENST00000595897 COPS2P61201 443 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms