RNA–Protein interactions for RNA: ENST00000595560.1

ZNF550-207, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 565 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-207ENST00000595560 UBA7P41226 1012 aa17.42■□□□□ 0.38
ZNF550-207ENST00000595560 AFF1P51825 1210 aaKnown RBP17.42■□□□□ 0.38
ZNF550-207ENST00000595560 SLC12A3P55017 1021 aa17.42■□□□□ 0.38
ZNF550-207ENST00000595560 ERVFC1P60507 584 aa17.42■□□□□ 0.38
ZNF550-207ENST00000595560 GRIN1Q05586 938 aa17.42■□□□□ 0.38
ZNF550-207ENST00000595560 DMP1Q13316 513 aaPredicted RBP17.42■□□□□ 0.38
ZNF550-207ENST00000595560 PRPF4BQ13523 1007 aaKnown RBP17.42■□□□□ 0.38
ZNF550-207ENST00000595560 CALML4Q96GE6 196 aa17.42■□□□□ 0.38
ZNF550-207ENST00000595560 PLIN2Q99541 437 aa17.42■□□□□ 0.38
ZNF550-207ENST00000595560 KIFC3Q9BVG8 833 aa17.42■□□□□ 0.38
ZNF550-207ENST00000595560 RNF39Q9H2S5 420 aa17.42■□□□□ 0.38
ZNF550-207ENST00000595560 NXF3Q9H4D5 531 aaKnown RBP17.42■□□□□ 0.38
ZNF550-207ENST00000595560 POLD4Q9HCU8 107 aa17.42■□□□□ 0.38
ZNF550-207ENST00000595560 CLDND1Q9NY35 253 aa17.42■□□□□ 0.38
ZNF550-207ENST00000595560 GIT1Q9Y2X7 761 aa17.42■□□□□ 0.38
ZNF550-207ENST00000595560 PCDHGC5Q9Y5F6 944 aa17.42■□□□□ 0.38
ZNF550-207ENST00000595560 CLIC4Q9Y696 253 aa17.42■□□□□ 0.38
ZNF550-207ENST00000595560 FSD2A1L4K1 749 aa17.41■□□□□ 0.38
ZNF550-207ENST00000595560 ARL5CA6NH57 179 aa17.41■□□□□ 0.38
ZNF550-207ENST00000595560 TTLL13PA6NNM8 815 aa17.41■□□□□ 0.38
ZNF550-207ENST00000595560 N4BP3O15049 544 aa17.41■□□□□ 0.38
ZNF550-207ENST00000595560 NPTXRO95502 500 aa17.41■□□□□ 0.38
ZNF550-207ENST00000595560 GTF2F1P35269 517 aaKnown RBP eCLIP17.41■□□□□ 0.38
ZNF550-207ENST00000595560 MLH1P40692 756 aa17.41■□□□□ 0.38
ZNF550-207ENST00000595560 NPTX2P47972 431 aa17.41■□□□□ 0.38
ZNF550-207ENST00000595560 PEX3P56589 373 aa17.41■□□□□ 0.38
ZNF550-207ENST00000595560 FAM173BQ6P4H8 233 aa17.41■□□□□ 0.38
ZNF550-207ENST00000595560 CDR2LQ86X02 465 aaPredicted RBP17.41■□□□□ 0.38
ZNF550-207ENST00000595560 ZNF280BQ86YH2 543 aa17.41■□□□□ 0.38
ZNF550-207ENST00000595560 EFHBQ8N7U6 833 aa17.41■□□□□ 0.38
ZNF550-207ENST00000595560 MICAL1Q8TDZ2 1067 aa17.41■□□□□ 0.38
ZNF550-207ENST00000595560 TMEM169Q96HH4 297 aa17.41■□□□□ 0.38
ZNF550-207ENST00000595560 TCF25Q9BQ70 676 aa17.41■□□□□ 0.38
ZNF550-207ENST00000595560 GBP3Q9H0R5 595 aa17.41■□□□□ 0.38
ZNF550-207ENST00000595560 PDZD7Q9H5P4 517 aa17.41■□□□□ 0.38
ZNF550-207ENST00000595560 NGRNQ9NPE2 291 aaKnown RBP17.41■□□□□ 0.38
ZNF550-207ENST00000595560 DNAJB4Q9UDY4 337 aa17.41■□□□□ 0.38
ZNF550-207ENST00000595560 MORC2Q9Y6X9 1032 aaPredicted RBP17.41■□□□□ 0.38
ZNF550-207ENST00000595560 PHLPP2Q6ZVD8 1323 aa17.41■□□□□ 0.38
ZNF550-207ENST00000595560 NT5C1B-RDH14C9J2C7 533 aa17.4■□□□□ 0.38
ZNF550-207ENST00000595560 B4GALT3O60512 393 aa17.4■□□□□ 0.38
ZNF550-207ENST00000595560 DDHD2O94830 711 aa17.4■□□□□ 0.38
ZNF550-207ENST00000595560 EDN1P05305 212 aa17.4■□□□□ 0.38
ZNF550-207ENST00000595560 SSBP05455 408 aaKnown RBP eCLIP17.4■□□□□ 0.38
ZNF550-207ENST00000595560 GALTP07902 379 aa17.4■□□□□ 0.38
ZNF550-207ENST00000595560 PLA2G4BP0C869 781 aa17.4■□□□□ 0.38
ZNF550-207ENST00000595560 PDIA4P13667 645 aaKnown RBP17.4■□□□□ 0.38
ZNF550-207ENST00000595560 LTBRP36941 435 aa17.4■□□□□ 0.38
ZNF550-207ENST00000595560 NRIP1P48552 1158 aa17.4■□□□□ 0.38
ZNF550-207ENST00000595560 ADAM15Q13444 863 aa17.4■□□□□ 0.38
ZNF550-207ENST00000595560 TMEM173Q86WV6 379 aaPredicted RBP17.4■□□□□ 0.38
ZNF550-207ENST00000595560 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.4■□□□□ 0.38
ZNF550-207ENST00000595560 IGSF21Q96ID5 467 aa17.4■□□□□ 0.38
ZNF550-207ENST00000595560 UHRF1Q96T88 793 aaPredicted RBP17.4■□□□□ 0.38
ZNF550-207ENST00000595560 GAD1Q99259 594 aa17.4■□□□□ 0.38
ZNF550-207ENST00000595560 CDCA3Q99618 268 aaPredicted RBP17.4■□□□□ 0.38
ZNF550-207ENST00000595560 ADPGKQ9BRR6 497 aa17.4■□□□□ 0.38
ZNF550-207ENST00000595560 TMEM175Q9BSA9 504 aa17.4■□□□□ 0.38
ZNF550-207ENST00000595560 ENTPD7Q9NQZ7 604 aa17.4■□□□□ 0.38
ZNF550-207ENST00000595560 ARHGAP28Q9P2N2 729 aa17.4■□□□□ 0.38
ZNF550-207ENST00000595560 CCDC169A6NNP5 214 aa17.39■□□□□ 0.37
ZNF550-207ENST00000595560 H3BQ06 376 aaPredicted RBP17.39■□□□□ 0.37
ZNF550-207ENST00000595560 K7ERI5 159 aa17.39■□□□□ 0.37
ZNF550-207ENST00000595560 TBX10O75333 385 aa17.39■□□□□ 0.37
ZNF550-207ENST00000595560 POMCP01189 267 aa17.39■□□□□ 0.37
ZNF550-207ENST00000595560 HSP90AA1P07900 732 aaKnown RBP17.39■□□□□ 0.37
ZNF550-207ENST00000595560 LIG1P18858 919 aa17.39■□□□□ 0.37
ZNF550-207ENST00000595560 PLCG1P19174 1290 aa17.39■□□□□ 0.37
ZNF550-207ENST00000595560 SLC11A1P49279 550 aa17.39■□□□□ 0.37
ZNF550-207ENST00000595560 TMEM132AQ24JP5 1023 aa17.39■□□□□ 0.37
ZNF550-207ENST00000595560 PUS10Q3MIT2 529 aaKnown RBP17.39■□□□□ 0.37
ZNF550-207ENST00000595560 PLPP4Q5VZY2 271 aa17.39■□□□□ 0.37
ZNF550-207ENST00000595560 EP400NLQ6ZTU2 488 aa17.39■□□□□ 0.37
ZNF550-207ENST00000595560 LRRC15Q8TF66 581 aa17.39■□□□□ 0.37
ZNF550-207ENST00000595560 ZFP42Q96MM3 310 aa17.39■□□□□ 0.37
ZNF550-207ENST00000595560 FAM193BQ96PV7 902 aaPredicted RBP17.39■□□□□ 0.37
ZNF550-207ENST00000595560 NTPCRQ9BSD7 190 aaKnown RBP17.39■□□□□ 0.37
ZNF550-207ENST00000595560 APOL6Q9BWW8 343 aa17.39■□□□□ 0.37
ZNF550-207ENST00000595560 CCSER1Q9C0I3 900 aa17.39■□□□□ 0.37
ZNF550-207ENST00000595560 IGFLR1Q9H665 355 aa17.39■□□□□ 0.37
ZNF550-207ENST00000595560 TMEM134Q9H6X4 195 aa17.39■□□□□ 0.37
ZNF550-207ENST00000595560 TLE6Q9H808 572 aa17.39■□□□□ 0.37
ZNF550-207ENST00000595560 KMT5AQ9NQR1 393 aa17.39■□□□□ 0.37
ZNF550-207ENST00000595560 KCNG1Q9UIX4 513 aa17.39■□□□□ 0.37
ZNF550-207ENST00000595560 FBXO2Q9UK22 296 aaPredicted RBP17.39■□□□□ 0.37
ZNF550-207ENST00000595560 RBM19Q9Y4C8 960 aaKnown RBP17.39■□□□□ 0.37
ZNF550-207ENST00000595560 SRPRBQ9Y5M8 271 aaKnown RBP17.39■□□□□ 0.37
ZNF550-207ENST00000595560 LINC01565O15544 149 aa17.38■□□□□ 0.37
ZNF550-207ENST00000595560 PLS3P13797 630 aa17.38■□□□□ 0.37
ZNF550-207ENST00000595560 AKAP5P24588 427 aa17.38■□□□□ 0.37
ZNF550-207ENST00000595560 MARCKSP29966 332 aaPredicted RBP17.38■□□□□ 0.37
ZNF550-207ENST00000595560 SCNN1GP51170 649 aa17.38■□□□□ 0.37
ZNF550-207ENST00000595560 DLX2Q07687 328 aaPredicted RBP17.38■□□□□ 0.37
ZNF550-207ENST00000595560 DSC1Q08554 894 aa17.38■□□□□ 0.37
ZNF550-207ENST00000595560 RAD51AP2Q09MP3 1159 aa17.38■□□□□ 0.37
ZNF550-207ENST00000595560 KARSQ15046 597 aaKnown RBP17.38■□□□□ 0.37
ZNF550-207ENST00000595560 DUSP6Q16828 381 aa17.38■□□□□ 0.37
ZNF550-207ENST00000595560 DCAF4L1Q3SXM0 396 aa17.38■□□□□ 0.37
ZNF550-207ENST00000595560 ATF7IP2Q5U623 682 aa17.38■□□□□ 0.37
ZNF550-207ENST00000595560 PTCRAQ6ISU1 281 aaPredicted RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms