RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 COMTP21964 271 aa17.76■□□□□ 0.43
LIG1-206ENST00000594067 RFX1P22670 979 aa17.76■□□□□ 0.43
LIG1-206ENST00000594067 PTGIRP43119 386 aa17.76■□□□□ 0.43
LIG1-206ENST00000594067 EIF3BP55884 814 aaKnown RBP17.76■□□□□ 0.43
LIG1-206ENST00000594067 GPC5P78333 572 aa17.76■□□□□ 0.43
LIG1-206ENST00000594067 INTS8Q75QN2 995 aaKnown RBP17.76■□□□□ 0.43
LIG1-206ENST00000594067 MIER3Q7Z3K6 550 aa17.76■□□□□ 0.43
LIG1-206ENST00000594067 CPNE8Q86YQ8 564 aa17.76■□□□□ 0.43
LIG1-206ENST00000594067 UBL4BQ8N7F7 174 aa17.76■□□□□ 0.43
LIG1-206ENST00000594067 PRELID2Q8N945 189 aa17.76■□□□□ 0.43
LIG1-206ENST00000594067 PLEKHO2Q8TD55 490 aa17.76■□□□□ 0.43
LIG1-206ENST00000594067 RNF25Q96BH1 459 aaPredicted RBP17.76■□□□□ 0.43
LIG1-206ENST00000594067 XPO6Q96QU8 1125 aaKnown RBP17.76■□□□□ 0.43
LIG1-206ENST00000594067 CNOT10Q9H9A5 744 aaKnown RBP17.76■□□□□ 0.43
LIG1-206ENST00000594067 TPX2Q9ULW0 747 aaKnown RBP17.76■□□□□ 0.43
LIG1-206ENST00000594067 PHF2O75151 1096 aa17.76■□□□□ 0.43
LIG1-206ENST00000594067 ITGB5P18084 799 aa17.76■□□□□ 0.43
LIG1-206ENST00000594067 CETN1Q12798 172 aa17.76■□□□□ 0.43
LIG1-206ENST00000594067 C1orf220Q5T0J3 134 aa17.76■□□□□ 0.43
LIG1-206ENST00000594067 UBAP2Q5T6F2 1119 aaKnown RBP17.76■□□□□ 0.43
LIG1-206ENST00000594067 TTC27Q6P3X3 843 aa17.76■□□□□ 0.43
LIG1-206ENST00000594067 LDHDQ86WU2 507 aa17.76■□□□□ 0.43
LIG1-206ENST00000594067 CHURC1Q8WUH1 139 aa17.76■□□□□ 0.43
LIG1-206ENST00000594067 P3H4Q92791 437 aa17.76■□□□□ 0.43
LIG1-206ENST00000594067 CENPTQ96BT3 561 aa17.76■□□□□ 0.43
LIG1-206ENST00000594067 CHMP6Q96FZ7 201 aa17.76■□□□□ 0.43
LIG1-206ENST00000594067 ZSWIM1Q9BR11 485 aa17.76■□□□□ 0.43
LIG1-206ENST00000594067 MXRA8Q9BRK3 442 aa17.76■□□□□ 0.43
LIG1-206ENST00000594067 KDM4CQ9H3R0 1056 aa17.76■□□□□ 0.43
LIG1-206ENST00000594067 RASAL2Q9UJF2 1139 aa17.76■□□□□ 0.43
LIG1-206ENST00000594067 TRPC5Q9UL62 973 aaPredicted RBP17.76■□□□□ 0.43
LIG1-206ENST00000594067 ZBTB21Q9ULJ3 1066 aa17.76■□□□□ 0.43
LIG1-206ENST00000594067 ATP2C2O75185 946 aa17.75■□□□□ 0.43
LIG1-206ENST00000594067 GRIPAP1Q4V328 841 aa17.75■□□□□ 0.43
LIG1-206ENST00000594067 EPC2Q52LR7 807 aa17.75■□□□□ 0.43
LIG1-206ENST00000594067 SPDYCQ5MJ68 293 aa17.75■□□□□ 0.43
LIG1-206ENST00000594067 C11orf63Q6NUN7 778 aa17.75■□□□□ 0.43
LIG1-206ENST00000594067 UHMK1Q8TAS1 419 aaKnown RBP17.75■□□□□ 0.43
LIG1-206ENST00000594067 NEK9Q8TD19 979 aa17.75■□□□□ 0.43
LIG1-206ENST00000594067 BTBD6Q96KE9 485 aa17.75■□□□□ 0.43
LIG1-206ENST00000594067 PABPC3Q9H361 631 aaKnown RBP17.75■□□□□ 0.43
LIG1-206ENST00000594067 LARSQ9P2J5 1176 aaKnown RBP17.75■□□□□ 0.43
LIG1-206ENST00000594067 SYNGAP1Q96PV0 1343 aa17.75■□□□□ 0.43
LIG1-206ENST00000594067 MIF4GDA9UHW6 222 aaKnown RBP17.75■□□□□ 0.43
LIG1-206ENST00000594067 RPL21P46778 160 aaKnown RBP17.75■□□□□ 0.43
LIG1-206ENST00000594067 HADHBP55084 474 aaKnown RBP17.75■□□□□ 0.43
LIG1-206ENST00000594067 DENND2CQ68D51 928 aa17.75■□□□□ 0.43
LIG1-206ENST00000594067 HOOK3Q86VS8 718 aa17.75■□□□□ 0.43
LIG1-206ENST00000594067 GIMAP7Q8NHV1 300 aa17.75■□□□□ 0.43
LIG1-206ENST00000594067 MAGEC3Q8TD91 643 aa17.75■□□□□ 0.43
LIG1-206ENST00000594067 HVCN1Q96D96 273 aa17.75■□□□□ 0.43
LIG1-206ENST00000594067 GRHL1Q9NZI5 618 aa17.75■□□□□ 0.43
LIG1-206ENST00000594067 HERC5Q9UII4 1024 aaKnown RBP17.75■□□□□ 0.43
LIG1-206ENST00000594067 TCRBV7S2A1N4TA0A589 114 aa17.75■□□□□ 0.43
LIG1-206ENST00000594067 GOLGA8IPA6NC78 632 aa17.75■□□□□ 0.43
LIG1-206ENST00000594067 GOLGA8JA6NMD2 632 aa17.75■□□□□ 0.43
LIG1-206ENST00000594067 GHRP10912 638 aa17.75■□□□□ 0.43
LIG1-206ENST00000594067 CHRNB2P17787 502 aa17.75■□□□□ 0.43
LIG1-206ENST00000594067 MYBPC2Q14324 1141 aa17.75■□□□□ 0.43
LIG1-206ENST00000594067 NOP9Q86U38 636 aaKnown RBP17.75■□□□□ 0.43
LIG1-206ENST00000594067 CCDC50Q8IVM0 306 aa17.75■□□□□ 0.43
LIG1-206ENST00000594067 ZNF317Q96PQ6 595 aaPredicted RBP17.75■□□□□ 0.43
LIG1-206ENST00000594067 ACCSQ96QU6 501 aa17.75■□□□□ 0.43
LIG1-206ENST00000594067 FAM129AQ9BZQ8 928 aa17.75■□□□□ 0.43
LIG1-206ENST00000594067 TMEM206Q9H813 350 aa17.75■□□□□ 0.43
LIG1-206ENST00000594067 HSPBP1Q9NZL4 362 aa17.75■□□□□ 0.43
LIG1-206ENST00000594067 SYNPO2Q9UMS6 1093 aa17.75■□□□□ 0.43
LIG1-206ENST00000594067 SLX4Q8IY92 1834 aa17.74■□□□□ 0.43
LIG1-206ENST00000594067 PFASO15067 1338 aa17.74■□□□□ 0.43
LIG1-206ENST00000594067 TMEM150BA6NC51 233 aa17.74■□□□□ 0.43
LIG1-206ENST00000594067 PPIP5K2O43314 1243 aa17.74■□□□□ 0.43
LIG1-206ENST00000594067 CTNND1O60716 968 aaKnown RBP17.74■□□□□ 0.43
LIG1-206ENST00000594067 RTN2O75298 545 aa17.74■□□□□ 0.43
LIG1-206ENST00000594067 DNAJC8O75937 253 aaPredicted RBP17.74■□□□□ 0.43
LIG1-206ENST00000594067 CHRNA3P32297 505 aa17.74■□□□□ 0.43
LIG1-206ENST00000594067 SLC29A2Q14542 456 aa17.74■□□□□ 0.43
LIG1-206ENST00000594067 TAX1BP1Q86VP1 789 aa17.74■□□□□ 0.43
LIG1-206ENST00000594067 CEP57Q86XR8 500 aa17.74■□□□□ 0.43
LIG1-206ENST00000594067 RIT2Q99578 217 aa17.74■□□□□ 0.43
LIG1-206ENST00000594067 SELENOSQ9BQE4 189 aa17.74■□□□□ 0.43
LIG1-206ENST00000594067 SEMA4AQ9H3S1 761 aa17.74■□□□□ 0.43
LIG1-206ENST00000594067 ZHX2Q9Y6X8 837 aa17.74■□□□□ 0.43
LIG1-206ENST00000594067 RBBP6Q7Z6E9 1792 aaKnown RBP17.74■□□□□ 0.43
LIG1-206ENST00000594067 RPTORQ8N122 1335 aa17.74■□□□□ 0.43
LIG1-206ENST00000594067 MGRN1O60291 552 aa17.74■□□□□ 0.43
LIG1-206ENST00000594067 NUDT17P0C025 328 aa17.74■□□□□ 0.43
LIG1-206ENST00000594067 PYGMP11217 842 aa17.74■□□□□ 0.43
LIG1-206ENST00000594067 PEX5P50542 639 aa17.74■□□□□ 0.43
LIG1-206ENST00000594067 CLUL1Q15846 466 aa17.74■□□□□ 0.43
LIG1-206ENST00000594067 SEL1L2Q5TEA6 688 aa17.74■□□□□ 0.43
LIG1-206ENST00000594067 CCDC137Q6PK04 289 aaKnown RBP17.74■□□□□ 0.43
LIG1-206ENST00000594067 XXYLT1Q8NBI6 393 aa17.74■□□□□ 0.43
LIG1-206ENST00000594067 IL31RAQ8NI17 732 aa17.74■□□□□ 0.43
LIG1-206ENST00000594067 AGBL1Q96MI9 1066 aa17.74■□□□□ 0.43
LIG1-206ENST00000594067 GLIS2Q9BZE0 524 aaPredicted RBP17.74■□□□□ 0.43
LIG1-206ENST00000594067 TMEM117Q9H0C3 514 aa17.74■□□□□ 0.43
LIG1-206ENST00000594067 AZI2Q9H6S1 392 aa17.74■□□□□ 0.43
LIG1-206ENST00000594067 KCNH7Q9NS40 1196 aa17.74■□□□□ 0.43
LIG1-206ENST00000594067 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.74■□□□□ 0.43
LIG1-206ENST00000594067 CYP26A1O43174 497 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms