RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 TAB2Q9NYJ8 693 aa14.74□□□□□ -0.05
VMP1-217ENST00000593168 KAT6AQ92794 2004 aa14.74□□□□□ -0.05
VMP1-217ENST00000593168 MOXD2PA6NHM9 499 aa14.73□□□□□ -0.05
VMP1-217ENST00000593168 LRRIQ4A6NIV6 560 aa14.73□□□□□ -0.05
VMP1-217ENST00000593168 LGALS16A8MUM7 142 aa14.73□□□□□ -0.05
VMP1-217ENST00000593168 K7ERI5 159 aa14.73□□□□□ -0.05
VMP1-217ENST00000593168 CLIC2O15247 247 aa14.73□□□□□ -0.05
VMP1-217ENST00000593168 SLC16A3O15427 465 aaKnown RBP14.73□□□□□ -0.05
VMP1-217ENST00000593168 C6orf222P0C671 652 aaPredicted RBP14.73□□□□□ -0.05
VMP1-217ENST00000593168 SMIM10L2AP0DMW4 78 aa14.73□□□□□ -0.05
VMP1-217ENST00000593168 SMIM10L2BP0DMW5 78 aa14.73□□□□□ -0.05
VMP1-217ENST00000593168 EFNA5P52803 228 aa14.73□□□□□ -0.05
VMP1-217ENST00000593168 IGBP1P78318 339 aa14.73□□□□□ -0.05
VMP1-217ENST00000593168 PURAQ00577 322 aaKnown RBP14.73□□□□□ -0.05
VMP1-217ENST00000593168 LAMTOR4Q0VGL1 99 aa14.73□□□□□ -0.05
VMP1-217ENST00000593168 CAPSQ13938 189 aa14.73□□□□□ -0.05
VMP1-217ENST00000593168 TFDP1Q14186 410 aa14.73□□□□□ -0.05
VMP1-217ENST00000593168 MAN2A1Q16706 1144 aa14.73□□□□□ -0.05
VMP1-217ENST00000593168 CCDC40Q4G0X9 1142 aa14.73□□□□□ -0.05
VMP1-217ENST00000593168 HS1BP3Q53T59 392 aa14.73□□□□□ -0.05
VMP1-217ENST00000593168 GNASQ5JWF2 1037 aa14.73□□□□□ -0.05
VMP1-217ENST00000593168 TMEM240Q5SV17 173 aa14.73□□□□□ -0.05
VMP1-217ENST00000593168 MARCH8Q5T0T0 291 aa14.73□□□□□ -0.05
VMP1-217ENST00000593168 RASIP1Q5U651 963 aa14.73□□□□□ -0.05
VMP1-217ENST00000593168 VSTM4Q8IW00 320 aa14.73□□□□□ -0.05
VMP1-217ENST00000593168 METTL13Q8N6R0 699 aa14.73□□□□□ -0.05
VMP1-217ENST00000593168 MTG1Q9BT17 334 aaPredicted RBP14.73□□□□□ -0.05
VMP1-217ENST00000593168 C2orf40Q9H1Z8 148 aa14.73□□□□□ -0.05
VMP1-217ENST00000593168 PRDM12Q9H4Q4 367 aa14.73□□□□□ -0.05
VMP1-217ENST00000593168 METTL14Q9HCE5 456 aaKnown RBP14.73□□□□□ -0.05
VMP1-217ENST00000593168 IMPACTQ9P2X3 320 aa14.73□□□□□ -0.05
VMP1-217ENST00000593168 RAPGEFL1Q9UHV5 662 aa14.73□□□□□ -0.05
VMP1-217ENST00000593168 MBLAC1A4D2B0 266 aaPredicted RBP14.72□□□□□ -0.05
VMP1-217ENST00000593168 TEX33O43247 280 aa14.72□□□□□ -0.05
VMP1-217ENST00000593168 AKAP3O75969 853 aa14.72□□□□□ -0.05
VMP1-217ENST00000593168 PIGRP01833 764 aa14.72□□□□□ -0.05
VMP1-217ENST00000593168 PTMAP06454 111 aaKnown RBP14.72□□□□□ -0.05
VMP1-217ENST00000593168 PRKCSHP14314 528 aaPredicted RBP14.72□□□□□ -0.05
VMP1-217ENST00000593168 CST5P28325 142 aaPredicted RBP14.72□□□□□ -0.05
VMP1-217ENST00000593168 HOXD11P31277 338 aaPredicted RBP14.72□□□□□ -0.05
VMP1-217ENST00000593168 PBX1P40424 430 aa14.72□□□□□ -0.05
VMP1-217ENST00000593168 CDK7P50613 346 aa14.72□□□□□ -0.05
VMP1-217ENST00000593168 STRN3Q13033 797 aa14.72□□□□□ -0.05
VMP1-217ENST00000593168 VWA3BQ502W6 1294 aa14.72□□□□□ -0.05
VMP1-217ENST00000593168 CDCA2Q69YH5 1023 aaPredicted RBP14.72□□□□□ -0.05
VMP1-217ENST00000593168 TAS1R3Q7RTX0 852 aa14.72□□□□□ -0.05
VMP1-217ENST00000593168 TRIM59Q8IWR1 403 aa14.72□□□□□ -0.05
VMP1-217ENST00000593168 SPC24Q8NBT2 197 aa14.72□□□□□ -0.05
VMP1-217ENST00000593168 NOC4LQ9BVI4 516 aaKnown RBP14.72□□□□□ -0.05
VMP1-217ENST00000593168 NFKBIZQ9BYH8 718 aa14.72□□□□□ -0.05
VMP1-217ENST00000593168 IKZF4Q9H2S9 585 aa14.72□□□□□ -0.05
VMP1-217ENST00000593168 RNF216Q9NWF9 866 aaPredicted RBP14.72□□□□□ -0.05
VMP1-217ENST00000593168 EVPLQ92817 2033 aa14.71□□□□□ -0.05
VMP1-217ENST00000593168 MAPK13O15264 365 aa14.71□□□□□ -0.05
VMP1-217ENST00000593168 ASGR1P07306 291 aa14.71□□□□□ -0.05
VMP1-217ENST00000593168 ACRP10323 421 aa14.71□□□□□ -0.05
VMP1-217ENST00000593168 EPB41P11171 864 aaKnown RBP14.71□□□□□ -0.05
VMP1-217ENST00000593168 CSF2RAP15509 400 aa14.71□□□□□ -0.05
VMP1-217ENST00000593168 PSMC2P35998 433 aaKnown RBP14.71□□□□□ -0.05
VMP1-217ENST00000593168 CLCN3P51790 818 aa14.71□□□□□ -0.05
VMP1-217ENST00000593168 PTENP60484 403 aa14.71□□□□□ -0.05
VMP1-217ENST00000593168 ADAM17P78536 824 aa14.71□□□□□ -0.05
VMP1-217ENST00000593168 CDC42EP1Q00587 391 aa14.71□□□□□ -0.05
VMP1-217ENST00000593168 PPP2R3AQ06190 1150 aa14.71□□□□□ -0.05
VMP1-217ENST00000593168 PPIGQ13427 754 aaKnown RBP eCLIP14.71□□□□□ -0.052e-9■■□□□ 13.5
VMP1-217ENST00000593168 MIIPQ5JXC2 388 aa14.71□□□□□ -0.05
VMP1-217ENST00000593168 CEP135Q66GS9 1140 aa14.71□□□□□ -0.05
VMP1-217ENST00000593168 ZNF365Q70YC5 407 aa14.71□□□□□ -0.05
VMP1-217ENST00000593168 TMC6Q7Z403 805 aa14.71□□□□□ -0.05
VMP1-217ENST00000593168 IFNLR1Q8IU57 520 aaPredicted RBP14.71□□□□□ -0.05
VMP1-217ENST00000593168 RHPN2Q8IUC4 686 aa14.71□□□□□ -0.05
VMP1-217ENST00000593168 ZBTB8OSQ8IWT0 167 aa14.71□□□□□ -0.05
VMP1-217ENST00000593168 RNF149Q8NC42 400 aa14.71□□□□□ -0.05
VMP1-217ENST00000593168 LMBR1Q8WVP7 490 aa14.71□□□□□ -0.05
VMP1-217ENST00000593168 TRIM44Q96DX7 344 aaPredicted RBP14.71□□□□□ -0.05
VMP1-217ENST00000593168 GAS2L1Q99501 681 aaPredicted RBP14.71□□□□□ -0.05
VMP1-217ENST00000593168 SETD4Q9NVD3 440 aa14.71□□□□□ -0.05
VMP1-217ENST00000593168 ARMCX3Q9UH62 379 aaPredicted RBP14.71□□□□□ -0.05
VMP1-217ENST00000593168 MROH7Q68CQ1 1323 aa14.7□□□□□ -0.06
VMP1-217ENST00000593168 ITIH6Q6UXX5 1313 aa14.7□□□□□ -0.06
VMP1-217ENST00000593168 SMIM35A0A1B0GVV1 85 aa14.7□□□□□ -0.06
VMP1-217ENST00000593168 A0A1W2PQC6 194 aa14.7□□□□□ -0.06
VMP1-217ENST00000593168 ANKRD63C9JTQ0 380 aa14.7□□□□□ -0.06
VMP1-217ENST00000593168 KIAA0391O15091 583 aaKnown RBP14.7□□□□□ -0.06
VMP1-217ENST00000593168 EXOC3O60645 756 aa14.7□□□□□ -0.06
VMP1-217ENST00000593168 SRGAP2CP0DJJ0 459 aa14.7□□□□□ -0.06
VMP1-217ENST00000593168 GNAT1P11488 350 aa14.7□□□□□ -0.06
VMP1-217ENST00000593168 GARTP22102 1010 aa14.7□□□□□ -0.06
VMP1-217ENST00000593168 HOXC8P31273 242 aa14.7□□□□□ -0.06
VMP1-217ENST00000593168 CASP4P49662 377 aa14.7□□□□□ -0.06
VMP1-217ENST00000593168 UBXN1Q04323 297 aa14.7□□□□□ -0.06
VMP1-217ENST00000593168 ADGRE1Q14246 886 aa14.7□□□□□ -0.06
VMP1-217ENST00000593168 SPECC1LQ69YQ0 1117 aa14.7□□□□□ -0.06
VMP1-217ENST00000593168 ARMCX5Q6P1M9 558 aa14.7□□□□□ -0.06
VMP1-217ENST00000593168 NFRKBQ6P4R8 1299 aa14.7□□□□□ -0.06
VMP1-217ENST00000593168 ZPBP2Q6X784 338 aa14.7□□□□□ -0.06
VMP1-217ENST00000593168 KIAA0319LQ8IZA0 1049 aa14.7□□□□□ -0.06
VMP1-217ENST00000593168 XXYLT1Q8NBI6 393 aa14.7□□□□□ -0.06
VMP1-217ENST00000593168 PCSK9Q8NBP7 692 aaKnown RBP14.7□□□□□ -0.06
VMP1-217ENST00000593168 ZBTB10Q96DT7 871 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms