RNA–Protein interactions for RNA: ENST00000593048.5

CIRBP-241, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 650 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-241ENST00000593048 LRRIQ4A6NIV6 560 aa17.91■□□□□ 0.46
CIRBP-241ENST00000593048 SPDYE4A6NLX3 237 aa17.91■□□□□ 0.46
CIRBP-241ENST00000593048 SSBP05455 408 aaKnown RBP eCLIP17.91■□□□□ 0.46
CIRBP-241ENST00000593048 OR52Z1P0C646 297 aa17.91■□□□□ 0.46
CIRBP-241ENST00000593048 SPATA31C1P0DKV0 1188 aa17.91■□□□□ 0.46
CIRBP-241ENST00000593048 SP100P23497 879 aaPredicted RBP17.91■□□□□ 0.46
CIRBP-241ENST00000593048 MBTD1Q05BQ5 628 aa17.91■□□□□ 0.46
CIRBP-241ENST00000593048 ITIH3Q06033 890 aa17.91■□□□□ 0.46
CIRBP-241ENST00000593048 ORC2Q13416 577 aaPredicted RBP17.91■□□□□ 0.46
CIRBP-241ENST00000593048 CATSPER3Q86XQ3 398 aa17.91■□□□□ 0.46
CIRBP-241ENST00000593048 IFNLR1Q8IU57 520 aaPredicted RBP17.91■□□□□ 0.46
CIRBP-241ENST00000593048 MCPH1Q8NEM0 835 aa17.91■□□□□ 0.46
CIRBP-241ENST00000593048 FBXO18Q8NFZ0 1043 aa17.91■□□□□ 0.46
CIRBP-241ENST00000593048 BCL7CQ8WUZ0 217 aaPredicted RBP17.91■□□□□ 0.46
CIRBP-241ENST00000593048 MFSD14AQ96MC6 490 aa17.91■□□□□ 0.46
CIRBP-241ENST00000593048 EMILIN2Q9BXX0 1053 aa17.91■□□□□ 0.46
CIRBP-241ENST00000593048 ADAM7Q9H2U9 754 aa17.91■□□□□ 0.46
CIRBP-241ENST00000593048 NOL7Q9UMY1 257 aaKnown RBP17.91■□□□□ 0.46
CIRBP-241ENST00000593048 NR2E1Q9Y466 385 aa17.91■□□□□ 0.46
CIRBP-241ENST00000593048 HES2Q9Y543 173 aa17.91■□□□□ 0.46
CIRBP-241ENST00000593048 IRAK3Q9Y616 596 aa17.91■□□□□ 0.46
CIRBP-241ENST00000593048 ARL5CA6NH57 179 aa17.9■□□□□ 0.46
CIRBP-241ENST00000593048 NRP1O14786 923 aa17.9■□□□□ 0.46
CIRBP-241ENST00000593048 MED24O75448 989 aa17.9■□□□□ 0.46
CIRBP-241ENST00000593048 NR1I2O75469 434 aa17.9■□□□□ 0.46
CIRBP-241ENST00000593048 ARF4P18085 180 aaPredicted RBP17.9■□□□□ 0.46
CIRBP-241ENST00000593048 OR1G1P47890 313 aa17.9■□□□□ 0.46
CIRBP-241ENST00000593048 TTC38Q5R3I4 469 aa17.9■□□□□ 0.46
CIRBP-241ENST00000593048 RARS2Q5T160 578 aaKnown RBP17.9■□□□□ 0.46
CIRBP-241ENST00000593048 ZBTB33Q86T24 672 aa17.9■□□□□ 0.46
CIRBP-241ENST00000593048 PPFIBP1Q86W92 1011 aa17.9■□□□□ 0.46
CIRBP-241ENST00000593048 RIPOR3Q96MK2 946 aa17.9■□□□□ 0.46
CIRBP-241ENST00000593048 NECTIN4Q96NY8 510 aa17.9■□□□□ 0.46
CIRBP-241ENST00000593048 GAD1Q99259 594 aa17.9■□□□□ 0.46
CIRBP-241ENST00000593048 POLR3CQ9BUI4 534 aaPredicted RBP17.9■□□□□ 0.46
CIRBP-241ENST00000593048 NFKBIZQ9BYH8 718 aa17.9■□□□□ 0.46
CIRBP-241ENST00000593048 RNF39Q9H2S5 420 aa17.9■□□□□ 0.46
CIRBP-241ENST00000593048 GPRC5CQ9NQ84 441 aa17.9■□□□□ 0.46
CIRBP-241ENST00000593048 DZANK1Q9NVP4 752 aa17.9■□□□□ 0.46
CIRBP-241ENST00000593048 DBR1Q9UK59 544 aaKnown RBP17.9■□□□□ 0.46
CIRBP-241ENST00000593048 PRG3Q9Y2Y8 225 aaPredicted RBP17.9■□□□□ 0.46
CIRBP-241ENST00000593048 B4GALT3O60512 393 aa17.89■□□□□ 0.45
CIRBP-241ENST00000593048 KLRC2P26717 231 aa17.89■□□□□ 0.45
CIRBP-241ENST00000593048 MLH1P40692 756 aa17.89■□□□□ 0.45
CIRBP-241ENST00000593048 MTHFRP42898 656 aa17.89■□□□□ 0.45
CIRBP-241ENST00000593048 ZXDAP98168 799 aa17.89■□□□□ 0.45
CIRBP-241ENST00000593048 AMHR2Q16671 573 aa17.89■□□□□ 0.45
CIRBP-241ENST00000593048 TMEM132AQ24JP5 1023 aa17.89■□□□□ 0.45
CIRBP-241ENST00000593048 HFE2Q6ZVN8 426 aa17.89■□□□□ 0.45
CIRBP-241ENST00000593048 CABP7Q86V35 215 aa17.89■□□□□ 0.45
CIRBP-241ENST00000593048 ALYREFQ86V81 257 aaKnown RBP17.89■□□□□ 0.45
CIRBP-241ENST00000593048 NOSTRINQ8IVI9 506 aa17.89■□□□□ 0.45
CIRBP-241ENST00000593048 ZBTB8OSQ8IWT0 167 aa17.89■□□□□ 0.45
CIRBP-241ENST00000593048 C12orf76Q8N812 135 aaPredicted RBP17.89■□□□□ 0.45
CIRBP-241ENST00000593048 MRPL17Q9NRX2 175 aaKnown RBP17.89■□□□□ 0.45
CIRBP-241ENST00000593048 GIT1Q9Y2X7 761 aa17.89■□□□□ 0.45
CIRBP-241ENST00000593048 ARHGEF35A5YM69 484 aa17.88■□□□□ 0.45
CIRBP-241ENST00000593048 B4GALT5O43286 388 aa17.88■□□□□ 0.45
CIRBP-241ENST00000593048 NPTXRO95502 500 aa17.88■□□□□ 0.45
CIRBP-241ENST00000593048 EPCAMP16422 314 aa17.88■□□□□ 0.45
CIRBP-241ENST00000593048 RPA1P27694 616 aa17.88■□□□□ 0.45
CIRBP-241ENST00000593048 SCNN1GP51170 649 aa17.88■□□□□ 0.45
CIRBP-241ENST00000593048 PTPN14Q15678 1187 aa17.88■□□□□ 0.45
CIRBP-241ENST00000593048 ATAT1Q5SQI0 421 aa17.88■□□□□ 0.45
CIRBP-241ENST00000593048 HAUS3Q68CZ6 603 aa17.88■□□□□ 0.45
CIRBP-241ENST00000593048 SLC27A1Q6PCB7 646 aa17.88■□□□□ 0.45
CIRBP-241ENST00000593048 POTEGQ6S5H5 508 aa17.88■□□□□ 0.45
CIRBP-241ENST00000593048 PADI6Q6TGC4 694 aa17.88■□□□□ 0.45
CIRBP-241ENST00000593048 TRIM67Q6ZTA4 783 aa17.88■□□□□ 0.45
CIRBP-241ENST00000593048 CDR2LQ86X02 465 aaPredicted RBP17.88■□□□□ 0.45
CIRBP-241ENST00000593048 COLGALT2Q8IYK4 626 aa17.88■□□□□ 0.45
CIRBP-241ENST00000593048 VN1R3Q9BXE9 311 aa17.88■□□□□ 0.45
CIRBP-241ENST00000593048 PRMT7Q9NVM4 692 aaPredicted RBP17.88■□□□□ 0.45
CIRBP-241ENST00000593048 PARP2Q9UGN5 583 aa17.88■□□□□ 0.45
CIRBP-241ENST00000593048 SSX2IPQ9Y2D8 614 aa17.88■□□□□ 0.45
CIRBP-241ENST00000593048 WDFY4Q6ZS81 3184 aa17.87■□□□□ 0.45
CIRBP-241ENST00000593048 TECTAO75443 2155 aa17.87■□□□□ 0.45
CIRBP-241ENST00000593048 TMEM221A6NGB7 291 aa17.87■□□□□ 0.45
CIRBP-241ENST00000593048 M0R296 226 aa17.87■□□□□ 0.45
CIRBP-241ENST00000593048 C2CD2LO14523 706 aa17.87■□□□□ 0.45
CIRBP-241ENST00000593048 URODP06132 367 aa17.87■□□□□ 0.45
CIRBP-241ENST00000593048 WEE2P0C1S8 567 aa17.87■□□□□ 0.45
CIRBP-241ENST00000593048 AKAP5P24588 427 aa17.87■□□□□ 0.45
CIRBP-241ENST00000593048 TRAPPC10P48553 1259 aa17.87■□□□□ 0.45
CIRBP-241ENST00000593048 SLC22A17Q8WUG5 538 aa17.87■□□□□ 0.45
CIRBP-241ENST00000593048 PBXIP1Q96AQ6 731 aa17.87■□□□□ 0.45
CIRBP-241ENST00000593048 ZFP42Q96MM3 310 aa17.87■□□□□ 0.45
CIRBP-241ENST00000593048 KLHL5Q96PQ7 755 aa17.87■□□□□ 0.45
CIRBP-241ENST00000593048 C2orf40Q9H1Z8 148 aa17.87■□□□□ 0.45
CIRBP-241ENST00000593048 NXF3Q9H4D5 531 aaKnown RBP17.87■□□□□ 0.45
CIRBP-241ENST00000593048 POMKQ9H5K3 350 aa17.87■□□□□ 0.45
CIRBP-241ENST00000593048 MIOSQ9NXC5 875 aa17.87■□□□□ 0.45
CIRBP-241ENST00000593048 CDH22Q9UJ99 828 aa17.87■□□□□ 0.45
CIRBP-241ENST00000593048 TRIOO75962 3097 aa17.87■□□□□ 0.45
CIRBP-241ENST00000593048 ARID2Q68CP9 1835 aa17.86■□□□□ 0.45
CIRBP-241ENST00000593048 A0A1B0GUA9 196 aa17.86■□□□□ 0.45
CIRBP-241ENST00000593048 SOD2P04179 222 aa17.86■□□□□ 0.45
CIRBP-241ENST00000593048 LIG1P18858 919 aa17.86■□□□□ 0.45
CIRBP-241ENST00000593048 CCT6AP40227 531 aaKnown RBP17.86■□□□□ 0.45
CIRBP-241ENST00000593048 KIAA1841Q6NSI8 718 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms