RNA–Protein interactions for RNA: ENST00000592106.5

VMP1-214, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-214ENST00000592106 EIF2AK1Q9BQI3 630 aaKnown RBP11.29□□□□□ -0.6
VMP1-214ENST00000592106 TRIM6Q9C030 488 aaPredicted RBP11.29□□□□□ -0.6
VMP1-214ENST00000592106 ADAM7Q9H2U9 754 aa11.29□□□□□ -0.6
VMP1-214ENST00000592106 SFXN1Q9H9B4 322 aa11.29□□□□□ -0.6
VMP1-214ENST00000592106 ANKEF1Q9NU02 776 aa11.29□□□□□ -0.6
VMP1-214ENST00000592106 RGL1Q9NZL6 768 aa11.29□□□□□ -0.6
VMP1-214ENST00000592106 PCDHA12Q9UN75 941 aa11.29□□□□□ -0.6
VMP1-214ENST00000592106 FAN1Q9Y2M0 1017 aa11.29□□□□□ -0.6
VMP1-214ENST00000592106 ARID2Q68CP9 1835 aa11.29□□□□□ -0.6
VMP1-214ENST00000592106 INO80B-WBP1J3KQ70 363 aa11.28□□□□□ -0.6
VMP1-214ENST00000592106 LYPLA2O95372 231 aa11.28□□□□□ -0.6
VMP1-214ENST00000592106 CTDNEP1O95476 244 aa11.28□□□□□ -0.6
VMP1-214ENST00000592106 ALDH2P05091 517 aa11.28□□□□□ -0.6
VMP1-214ENST00000592106 URODP06132 367 aa11.28□□□□□ -0.6
VMP1-214ENST00000592106 NCLP19338 710 aaKnown RBP11.28□□□□□ -0.6
VMP1-214ENST00000592106 SLC11A1P49279 550 aa11.28□□□□□ -0.6
VMP1-214ENST00000592106 PTPN5P54829 565 aa11.28□□□□□ -0.6
VMP1-214ENST00000592106 POU5F1BQ06416 359 aa11.28□□□□□ -0.6
VMP1-214ENST00000592106 ATAT1Q5SQI0 421 aa11.28□□□□□ -0.6
VMP1-214ENST00000592106 RARS2Q5T160 578 aaKnown RBP11.28□□□□□ -0.6
VMP1-214ENST00000592106 ERICH6BQ5W0A0 696 aa11.28□□□□□ -0.6
VMP1-214ENST00000592106 MRPL10Q7Z7H8 261 aaKnown RBP11.28□□□□□ -0.6
VMP1-214ENST00000592106 CABP7Q86V35 215 aa11.28□□□□□ -0.6
VMP1-214ENST00000592106 DIS3L2Q8IYB7 885 aaKnown RBP11.28□□□□□ -0.6
VMP1-214ENST00000592106 FBXL6Q8N531 539 aa11.28□□□□□ -0.6
VMP1-214ENST00000592106 FBXL18Q96ME1 805 aa11.28□□□□□ -0.6
VMP1-214ENST00000592106 TTC12Q9H892 705 aaPredicted RBP11.28□□□□□ -0.6
VMP1-214ENST00000592106 GJB4Q9NTQ9 266 aa11.28□□□□□ -0.6
VMP1-214ENST00000592106 WRAP73Q9P2S5 460 aaPredicted RBP11.28□□□□□ -0.6
VMP1-214ENST00000592106 DPP7Q9UHL4 492 aa11.28□□□□□ -0.6
VMP1-214ENST00000592106 DBR1Q9UK59 544 aaKnown RBP11.28□□□□□ -0.6
VMP1-214ENST00000592106 SP100P23497 879 aaPredicted RBP11.27□□□□□ -0.61
VMP1-214ENST00000592106 KLRC2P26717 231 aa11.27□□□□□ -0.61
VMP1-214ENST00000592106 PTENP60484 403 aa11.27□□□□□ -0.61
VMP1-214ENST00000592106 NHLH1Q02575 133 aa11.27□□□□□ -0.61
VMP1-214ENST00000592106 SPIRE1Q08AE8 756 aa11.27□□□□□ -0.61
VMP1-214ENST00000592106 MTMR3Q13615 1198 aa11.27□□□□□ -0.61
VMP1-214ENST00000592106 EARS2Q5JPH6 523 aaKnown RBP11.27□□□□□ -0.61
VMP1-214ENST00000592106 AGMOQ6ZNB7 445 aa11.27□□□□□ -0.61
VMP1-214ENST00000592106 TMEM173Q86WV6 379 aaPredicted RBP11.27□□□□□ -0.61
VMP1-214ENST00000592106 UBALD2Q8IYN6 164 aa11.27□□□□□ -0.61
VMP1-214ENST00000592106 NECAB1Q8N987 351 aa11.27□□□□□ -0.61
VMP1-214ENST00000592106 NSUN7Q8NE18 718 aaKnown RBP11.27□□□□□ -0.61
VMP1-214ENST00000592106 AUTS2Q8WXX7 1259 aa11.27□□□□□ -0.61
VMP1-214ENST00000592106 HERC2P3Q9BVR0 1158 aa11.27□□□□□ -0.61
VMP1-214ENST00000592106 IRF2BPLQ9H1B7 796 aa11.27□□□□□ -0.61
VMP1-214ENST00000592106 POMKQ9H5K3 350 aa11.27□□□□□ -0.61
VMP1-214ENST00000592106 MRPL17Q9NRX2 175 aaKnown RBP11.27□□□□□ -0.61
VMP1-214ENST00000592106 DNAJB4Q9UDY4 337 aa11.27□□□□□ -0.61
VMP1-214ENST00000592106 SORCS3Q9UPU3 1222 aa11.27□□□□□ -0.61
VMP1-214ENST00000592106 FAM205CA6NFA0 338 aa11.26□□□□□ -0.61
VMP1-214ENST00000592106 MEIS3P2A8K0S8 358 aa11.26□□□□□ -0.61
VMP1-214ENST00000592106 TSPAN1O60635 241 aa11.26□□□□□ -0.61
VMP1-214ENST00000592106 SLITRK3O94933 977 aa11.26□□□□□ -0.61
VMP1-214ENST00000592106 POMCP01189 267 aa11.26□□□□□ -0.61
VMP1-214ENST00000592106 SOD2P04179 222 aa11.26□□□□□ -0.61
VMP1-214ENST00000592106 HOXA11P31270 313 aaPredicted RBP11.26□□□□□ -0.61
VMP1-214ENST00000592106 TXKP42681 527 aa11.26□□□□□ -0.61
VMP1-214ENST00000592106 OR1G1P47890 313 aa11.26□□□□□ -0.61
VMP1-214ENST00000592106 NEK4P51957 841 aa11.26□□□□□ -0.61
VMP1-214ENST00000592106 FOSBP53539 338 aa11.26□□□□□ -0.61
VMP1-214ENST00000592106 ORC2Q13416 577 aaPredicted RBP11.26□□□□□ -0.61
VMP1-214ENST00000592106 PTPN14Q15678 1187 aa11.26□□□□□ -0.61
VMP1-214ENST00000592106 ME3Q16798 604 aa11.26□□□□□ -0.61
VMP1-214ENST00000592106 UBXN11Q5T124 520 aa11.26□□□□□ -0.61
VMP1-214ENST00000592106 CCDC149Q6ZUS6 474 aa11.26□□□□□ -0.61
VMP1-214ENST00000592106 ALYREFQ86V81 257 aaKnown RBP11.26□□□□□ -0.61
VMP1-214ENST00000592106 ZNF280BQ86YH2 543 aa11.26□□□□□ -0.61
VMP1-214ENST00000592106 ZBTB8OSQ8IWT0 167 aa11.26□□□□□ -0.61
VMP1-214ENST00000592106 MCPH1Q8NEM0 835 aa11.26□□□□□ -0.61
VMP1-214ENST00000592106 ERMNQ8TAM6 284 aa11.26□□□□□ -0.61
VMP1-214ENST00000592106 TNFRSF25Q93038 417 aa11.26□□□□□ -0.61
VMP1-214ENST00000592106 ACSF2Q96CM8 615 aaPredicted RBP11.26□□□□□ -0.61
VMP1-214ENST00000592106 RPS6KC1Q96S38 1066 aa11.26□□□□□ -0.61
VMP1-214ENST00000592106 NFKBIZQ9BYH8 718 aa11.26□□□□□ -0.61
VMP1-214ENST00000592106 CSRNP2Q9H175 543 aa11.26□□□□□ -0.61
VMP1-214ENST00000592106 MINDY3Q9H8M7 445 aa11.26□□□□□ -0.61
VMP1-214ENST00000592106 USTQ9Y2C2 406 aa11.26□□□□□ -0.61
VMP1-214ENST00000592106 GIT1Q9Y2X7 761 aa11.26□□□□□ -0.61
VMP1-214ENST00000592106 IPPQ9Y573 584 aa11.26□□□□□ -0.61
VMP1-214ENST00000592106 BDP1A6H8Y1 2624 aa11.26□□□□□ -0.61
VMP1-214ENST00000592106 ZMYM2Q9UBW7 1377 aa11.26□□□□□ -0.61
VMP1-214ENST00000592106 LRRIQ4A6NIV6 560 aa11.25□□□□□ -0.61
VMP1-214ENST00000592106 BTBD18B2RXH4 712 aa11.25□□□□□ -0.61
VMP1-214ENST00000592106 C2CD4DB7Z1M9 353 aa11.25□□□□□ -0.61
VMP1-214ENST00000592106 NRP1O14786 923 aa11.25□□□□□ -0.61
VMP1-214ENST00000592106 USO1O60763 962 aaKnown RBP11.25□□□□□ -0.61
VMP1-214ENST00000592106 DDHD2O94830 711 aa11.25□□□□□ -0.61
VMP1-214ENST00000592106 LARGE1O95461 756 aa11.25□□□□□ -0.61
VMP1-214ENST00000592106 SSBP05455 408 aaKnown RBP eCLIP11.25□□□□□ -0.61
VMP1-214ENST00000592106 ADH1AP07327 375 aa11.25□□□□□ -0.61
VMP1-214ENST00000592106 XRCC6P12956 609 aaKnown RBP eCLIP11.25□□□□□ -0.61
VMP1-214ENST00000592106 FDPSP14324 419 aaKnown RBP11.25□□□□□ -0.61
VMP1-214ENST00000592106 HOXB3P14651 431 aaPredicted RBP11.25□□□□□ -0.61
VMP1-214ENST00000592106 EPCAMP16422 314 aa11.25□□□□□ -0.61
VMP1-214ENST00000592106 MLH1P40692 756 aa11.25□□□□□ -0.61
VMP1-214ENST00000592106 RARRES1P49788 294 aa11.25□□□□□ -0.61
VMP1-214ENST00000592106 MRE11P49959 708 aa11.25□□□□□ -0.61
VMP1-214ENST00000592106 CREMQ03060 361 aa11.25□□□□□ -0.61
VMP1-214ENST00000592106 GNL2Q13823 731 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms