RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 EVPLQ92817 2033 aa7.13□□□□□ -1.27
VPS4B-205ENST00000591383 SCN5AQ14524 2016 aa7.12□□□□□ -1.27
VPS4B-205ENST00000591383 NRCAMQ92823 1304 aa7.12□□□□□ -1.27
VPS4B-205ENST00000591383 A0A087WWV3 80 aa7.12□□□□□ -1.27
VPS4B-205ENST00000591383 TTC24A2A3L6 582 aaPredicted RBP7.12□□□□□ -1.27
VPS4B-205ENST00000591383 ARHGEF35A5YM69 484 aa7.12□□□□□ -1.27
VPS4B-205ENST00000591383 HBP1O60381 514 aa7.12□□□□□ -1.27
VPS4B-205ENST00000591383 CUTAO60888 179 aa7.12□□□□□ -1.27
VPS4B-205ENST00000591383 GNAT1P11488 350 aa7.12□□□□□ -1.27
VPS4B-205ENST00000591383 SYN1P17600 705 aa7.12□□□□□ -1.27
VPS4B-205ENST00000591383 PLCG1P19174 1290 aa7.12□□□□□ -1.27
VPS4B-205ENST00000591383 ATP4AP20648 1035 aa7.12□□□□□ -1.27
VPS4B-205ENST00000591383 YWHABP31946 246 aaKnown RBP7.12□□□□□ -1.27
VPS4B-205ENST00000591383 ARSDP51689 593 aa7.12□□□□□ -1.27
VPS4B-205ENST00000591383 CLCN3P51790 818 aa7.12□□□□□ -1.27
VPS4B-205ENST00000591383 POLGP54098 1239 aaPredicted RBP7.12□□□□□ -1.27
VPS4B-205ENST00000591383 NPEPPSP55786 919 aa7.12□□□□□ -1.27
VPS4B-205ENST00000591383 PTPN11Q06124 597 aaPredicted RBP7.12□□□□□ -1.27
VPS4B-205ENST00000591383 TBC1D8BQ0IIM8 1120 aa7.12□□□□□ -1.27
VPS4B-205ENST00000591383 EMC2Q15006 297 aa7.12□□□□□ -1.27
VPS4B-205ENST00000591383 SLC39A14Q15043 492 aa7.12□□□□□ -1.27
VPS4B-205ENST00000591383 KARSQ15046 597 aaKnown RBP7.12□□□□□ -1.27
VPS4B-205ENST00000591383 TRIP4Q15650 581 aaPredicted RBP7.12□□□□□ -1.27
VPS4B-205ENST00000591383 XKR3Q5GH77 459 aa7.12□□□□□ -1.27
VPS4B-205ENST00000591383 ATL3Q6DD88 541 aa7.12□□□□□ -1.27
VPS4B-205ENST00000591383 RUFY4Q6ZNE9 571 aa7.12□□□□□ -1.27
VPS4B-205ENST00000591383 ZNF438Q7Z4V0 828 aa7.12□□□□□ -1.27
VPS4B-205ENST00000591383 LRRC71Q8N4P6 559 aa7.12□□□□□ -1.27
VPS4B-205ENST00000591383 CCDC155Q8N6L0 562 aa7.12□□□□□ -1.27
VPS4B-205ENST00000591383 METTL13Q8N6R0 699 aa7.12□□□□□ -1.27
VPS4B-205ENST00000591383 PIGOQ8TEQ8 1089 aa7.12□□□□□ -1.27
VPS4B-205ENST00000591383 TNPO1Q92973 898 aaKnown RBP7.12□□□□□ -1.27
VPS4B-205ENST00000591383 CALML4Q96GE6 196 aa7.12□□□□□ -1.27
VPS4B-205ENST00000591383 CEP170P1Q96L14 293 aa7.12□□□□□ -1.27
VPS4B-205ENST00000591383 AK8Q96MA6 479 aa7.12□□□□□ -1.27
VPS4B-205ENST00000591383 SCLT1Q96NL6 688 aa7.12□□□□□ -1.27
VPS4B-205ENST00000591383 POLR3CQ9BUI4 534 aaPredicted RBP7.12□□□□□ -1.27
VPS4B-205ENST00000591383 SCAND2PQ9GZW5 306 aaPredicted RBP7.12□□□□□ -1.27
VPS4B-205ENST00000591383 HIPK3Q9H422 1215 aa7.12□□□□□ -1.27
VPS4B-205ENST00000591383 SRA1Q9HD15 236 aaKnown RBP7.12□□□□□ -1.27
VPS4B-205ENST00000591383 TMEM39AQ9NV64 488 aa7.12□□□□□ -1.27
VPS4B-205ENST00000591383 FNDC3AQ9Y2H6 1198 aaKnown RBP7.12□□□□□ -1.27
VPS4B-205ENST00000591383 SRPRBQ9Y5M8 271 aaKnown RBP7.12□□□□□ -1.27
VPS4B-205ENST00000591383 KCNMB2Q9Y691 235 aa7.12□□□□□ -1.27
VPS4B-205ENST00000591383 MYH11P35749 1972 aa7.11□□□□□ -1.27
VPS4B-205ENST00000591383 UMODL1Q5DID0 1318 aa7.11□□□□□ -1.27
VPS4B-205ENST00000591383 GOLGA6L4A6NEF3 574 aa7.11□□□□□ -1.27
VPS4B-205ENST00000591383 RRN3P2A6NIE6 340 aa7.11□□□□□ -1.27
VPS4B-205ENST00000591383 ZBTB42B2RXF5 422 aa7.11□□□□□ -1.27
VPS4B-205ENST00000591383 SPINT1O43278 529 aa7.11□□□□□ -1.27
VPS4B-205ENST00000591383 PPP6R2O75170 966 aa7.11□□□□□ -1.27
VPS4B-205ENST00000591383 C22orf31O95567 290 aa7.11□□□□□ -1.27
VPS4B-205ENST00000591383 SPATA31C1P0DKV0 1188 aa7.11□□□□□ -1.27
VPS4B-205ENST00000591383 RPA1P27694 616 aa7.11□□□□□ -1.27
VPS4B-205ENST00000591383 DNAJA1P31689 397 aaKnown RBP7.11□□□□□ -1.27
VPS4B-205ENST00000591383 THPOP40225 353 aa7.11□□□□□ -1.27
VPS4B-205ENST00000591383 STAT6P42226 847 aa7.11□□□□□ -1.27
VPS4B-205ENST00000591383 TMEM62Q0P6H9 643 aa7.11□□□□□ -1.27
VPS4B-205ENST00000591383 GRB10Q13322 594 aa7.11□□□□□ -1.27
VPS4B-205ENST00000591383 DHX8Q14562 1220 aaKnown RBP7.11□□□□□ -1.27
VPS4B-205ENST00000591383 TMEM119Q4V9L6 283 aa7.11□□□□□ -1.27
VPS4B-205ENST00000591383 ZNF484Q5JVG2 852 aa7.11□□□□□ -1.27
VPS4B-205ENST00000591383 MEI1Q5TIA1 1274 aa7.11□□□□□ -1.27
VPS4B-205ENST00000591383 PDE12Q6L8Q7 609 aaKnown RBP7.11□□□□□ -1.27
VPS4B-205ENST00000591383 USP49Q70CQ1 688 aa7.11□□□□□ -1.27
VPS4B-205ENST00000591383 ANO5Q75V66 913 aa7.11□□□□□ -1.27
VPS4B-205ENST00000591383 HS2ST1Q7LGA3 356 aa7.11□□□□□ -1.27
VPS4B-205ENST00000591383 ANKRD33Q7Z3H0 272 aa7.11□□□□□ -1.27
VPS4B-205ENST00000591383 BTLAQ7Z6A9 289 aa7.11□□□□□ -1.27
VPS4B-205ENST00000591383 SESTD1Q86VW0 696 aa7.11□□□□□ -1.27
VPS4B-205ENST00000591383 CATSPER3Q86XQ3 398 aa7.11□□□□□ -1.27
VPS4B-205ENST00000591383 C4orf19Q8IY42 314 aa7.11□□□□□ -1.27
VPS4B-205ENST00000591383 PDILTQ8N807 584 aa7.11□□□□□ -1.27
VPS4B-205ENST00000591383 SLC7A3Q8WY07 619 aa7.11□□□□□ -1.27
VPS4B-205ENST00000591383 WNT8BQ93098 351 aa7.11□□□□□ -1.27
VPS4B-205ENST00000591383 EPSTI1Q96J88 318 aa7.11□□□□□ -1.27
VPS4B-205ENST00000591383 MAP7D2Q96T17 732 aa7.11□□□□□ -1.27
VPS4B-205ENST00000591383 MMTAG2Q9BU76 263 aaKnown RBP7.11□□□□□ -1.27
VPS4B-205ENST00000591383 SEZ6LQ9BYH1 1024 aa7.11□□□□□ -1.27
VPS4B-205ENST00000591383 NT5C3AQ9H0P0 336 aa7.11□□□□□ -1.27
VPS4B-205ENST00000591383 ATP6V0A4Q9HBG4 840 aa7.11□□□□□ -1.27
VPS4B-205ENST00000591383 CYP26B1Q9NR63 512 aa7.11□□□□□ -1.27
VPS4B-205ENST00000591383 NRBP2Q9NSY0 501 aa7.11□□□□□ -1.27
VPS4B-205ENST00000591383 AKT3Q9Y243 479 aa7.11□□□□□ -1.27
VPS4B-205ENST00000591383 INPP5FQ9Y2H2 1132 aa7.11□□□□□ -1.27
VPS4B-205ENST00000591383 E9PMD0 336 aa7.1□□□□□ -1.27
VPS4B-205ENST00000591383 M0QZ92 97 aa7.1□□□□□ -1.27
VPS4B-205ENST00000591383 GDF9O60383 454 aa7.1□□□□□ -1.27
VPS4B-205ENST00000591383 PHACTR2O75167 634 aa7.1□□□□□ -1.27
VPS4B-205ENST00000591383 SLITRK3O94933 977 aa7.1□□□□□ -1.27
VPS4B-205ENST00000591383 CD4P01730 458 aa7.1□□□□□ -1.27
VPS4B-205ENST00000591383 VTNP04004 478 aa7.1□□□□□ -1.27
VPS4B-205ENST00000591383 KRT18P05783 430 aaKnown RBP7.1□□□□□ -1.27
VPS4B-205ENST00000591383 RAG1P15918 1043 aa7.1□□□□□ -1.27
VPS4B-205ENST00000591383 KLRC1P26715 233 aa7.1□□□□□ -1.27
VPS4B-205ENST00000591383 HOXC8P31273 242 aa7.1□□□□□ -1.27
VPS4B-205ENST00000591383 CYP2C18P33260 490 aa7.1□□□□□ -1.27
VPS4B-205ENST00000591383 GTF2F1P35269 517 aaKnown RBP eCLIP7.1□□□□□ -1.27
VPS4B-205ENST00000591383 CTSOP43234 321 aaPredicted RBP7.1□□□□□ -1.27
VPS4B-205ENST00000591383 RARRES1P49788 294 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms